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Chemidoc mp fluorescent imager

Manufactured by Bio-Rad
Sourced in United States

The ChemiDoc MP fluorescent imager is a laboratory equipment used for capturing and analyzing fluorescent images. It is designed to detect and quantify fluorescent signals from various biological samples, such as gels, blots, and microplates. The ChemiDoc MP provides high-resolution imaging and supports a range of fluorescent detection methods, enabling users to visualize and analyze their experimental data.

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4 protocols using chemidoc mp fluorescent imager

1

Quantitative Cysteine Oxidation Profiling

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Organs (lungs, kidney, heart, liver, and brain) from CSE–/– and CSE+/+ mice were isolated on ice, cleaned from connective tissue, and washed with ice-cold PBS. Immediately after isolation, the tissue was minced and homogenized on ice in HEN buffer (100 mM HEPES, 1 mM EDTA, 0.1 mM neocuproine, 1% SDS, pH7.4) supplemented with 20 mM MSBTA, 1% NP40 and 1% protease inhibitor cocktail, using Potter homogenizer. Homogenates were centrifuged at 10 000 × g for 20 min at 4 °C and clear supernatant was further incubated on ice for 1 h. 200 μL of supernatant samples were precipitated with water/methanol/chloroform mixture (v/v/v: 4/4/1) and centrifuged at 14 000 × g for 20 min at 4 °C. Obtained protein precipitates were dried under vacuum at 4 °C and stored at –80 °C. For improved tag-switch assay equal amounts of sample proteins (50 μg) were incubated with 100 μM Cy3-CN in 50 mM HEPES (pH 7.4) supplemented with 1.5% SDS, in dark, at 37 °C for 2 h, mixed with 4× non-reducing sample buffer (Bio-Rad, USA) and incubated for 30 min at 50 °C in dark. Samples were resolved on 10% SDS polyacrylamide gels in dark and immediately after short fixation and washing gels were scanned using ChemiDoc MP fluorescent imager (Bio-Rad, USA). Obtained images were semi-quantified using ImageJ software (NIH, USA).
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2

Western Blot Analysis of Protein Expression

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Sub-confluent treated cells were washed twice with cold PBS, trypsinized and then lysed in Pierce RIPA buffer (Thermo Fisher Scientific, 89900) with PhosSTOP inhibitor cocktail (Sigma Aldrich, PHOSS-RO) at 4°C for 30 mins. Protein concentrations were measured by a Pierce BCA Protein Assay Kit (Thermo Fisher Scientific, 23225). Proteins were separated by SDS‐PAGE (10% Mini-PROTEAN® TGX Precast Gel, Biorad, 4561036) and transferred to a PVDF membrane (Bio-Rad, 1620177). The membrane was blocked 3% BSA in TBST for 1 hour at room temperature and then blotted with primary antibodies overnight at 4°C. Full list of antibodies available in Supplemental Data. Blots were washed 3 × 5 minutes with TBST. The blots were then incubated with fluorescent-conjugated secondary antibody (Bio‐Rad) 1 hour at room temperature and washed 3 × 5 minutes with TBST. Proteins were visualized with a ChemiDoc MP fluorescent imager (Bio-Rad). Bio-Rad Image Lab analysis software was used to quantify protein band density. All western blots were repeated once.
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3

Quantification of Protein Cysteine Oxidation

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Organs (lungs, kidney, heart, liver, and brain) from CSE−/− and CSE+/+ mice were isolated on ice, cleaned from connective tissue, and washed with ice-cold PBS. Immediately after isolation, the tissue was minced and homogenized on ice in HEN buffer (100 mM HEPES, 1 mM EDTA, 0.1 mM neocuproine, 1% SDS, pH7.4) supplemented with 20 mM MSBTA, 1% NP40 and 1% protease inhibitor cocktail, using Potter homogenizer. Homogenates were centrifuged at 10,000 × g for 20 min at 4 °C and clear supernatant was further incubated on ice for 1 h. 200 μL of supernatant samples were precipitated with water/methanol/chloroform mixture (v/v/v: 4/4/1) and centrifuged at 14,000 × g for 20 min at 4°C. Obtained protein precipitates were dried under vacuum at 4 °C and stored at −80°C. For improved tag-switch assay equal amounts of sample proteins (50 μg) were incubated with 100 μM Cy3-CN in 50 mM HEPES (pH7.4) supplemented with 1.5% SDS, in dark, at 37°C for 2 h, mixed with 4x non-reducing sample buffer (Bio-Rad, USA) and incubated for 30 min at 50 °C in dark. Samples were resolved on 10% SDS polyacrylamide gels in dark and immediately after short fixation and washing gels were scanned using ChemiDoc MP fluorescent imager (Bio-Rad, USA). Obtained images were semi-quantified using ImageJ software (NIH, USA).
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4

Western Blot Analysis of Lung Lysates

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Cellular or whole lung lysates were run on a 10% SDS-PAGE gel and transferred using the Trans-Blot Turbo Transfer System (Bio-Rad). Low fluorescence polyvinylidene difluoride (PVDF) membranes (EMD Millipore, Billerica, MA, USA) were activated in methanol and blocked with EveryBlot Blocking Buffer (Bio-Rad) followed by incubation with the following primary antibodies: OGR1 (“GPR68” Invitrogen, Carlsbad, CA, USA), beta-tubulin (Abcam, Cambridge, MA, USA), α-SMA (Sigma-Aldrich, St. Louis, MO, USA), phospho-Smad2/total Smad2 (Abcam), and Col1A1 (Aviva Systems Biology, San Diego, CA, USA). Immunofluorescent secondary antibodies (StarBright520 for mouse and StarBright700 for rabbit, Bio-Rad) were diluted at 1:20k in 5% milk and TBST and membranes were incubated for one hour. Membranes were imaged with a Chemidoc MP fluorescent imager (Bio-Rad) and quantified with Image Lab (version 6.1, Bio-Rad).
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