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2 protocols using trichloric acetic acid

1

Mycobacterial Protein Extraction Protocol

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One day prior to making samples, cultures were washed with 7H9-0.2% dextrose-0.2% glycerol-0.05% Tween 80 to remove ADC. Cultures were grown in this medium at 30°C, with shaking at 90 rpm to an OD600 of 0.8 to 1.2. Cultures were harvested, and the supernatant was filtered through an 0.2-μm Millipore filter and precipitated with 10% trichloric acetic acid (Sigma) and 36 μg/ml tRNA (Roche). Pellets were washed with phosphate-buffered saline (PBS). Two OD units was taken and dissolved in SD buffer to a concentration of 0.02 OD/μl, making the pellet sample. Two OD units was incubated with 0.5% Genapol X-080 (in PBS) for 30 min at room temperature (RT). After spinning down, the supernatant was taken and diluted with SD buffer to a final concentration of 0.016 OD/μl, forming the Genapol supernatant fraction. The remaining pellet was washed with PBS and dissolved in SD buffer to a concentration of 0.02 OD/μl, forming the Genapol pellet fraction. Pellet samples were sonicated. All samples were incubated 5 min at 98°C.
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2

Graphene Oxide Synthesis and Characterization

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GO was prepared using a modified Hummers method and purified as described previously.68 RGO was produced by heating multilayer GO flakes at 250 C for 30 min in nitrogen flow. Few layer graphene (3–5 layers with nominal lateral dimension of 800 nm) was obtained commercially and characterized. Ascorbic acid, titanium (IV) oxide (TiO2) nanopowders (<25 nm particle size, >99.5 % trace metal basis), iron (II) sulfate haptahydrate (FeSO4·7H2O), reduced GSH, D-mannitol, pC60, xanthine, xanthine oxidase from bovine milk grade IV,2,2′-azobis(2-amidinopropane) hydrochloride (AAPH), thiobarbituric acid (TBA), trichloricacetic acid (TCA), DPPH, 2-deoxy-D-ribose (deoxyribose), sodium dodecyl sulfate (SDS), ABTS, β-Nicotinamide adenine dinucleotide 23-phosphate reduced tetrasodium salt hydrate (NADH), phenazinemethosulfate (PMS), xanthine, xanthine oxidase from bovine milk, and NBT were purchased from Sigma Chemicals Co (St. Louis, MO). Hydrogen peroxide (H2O2), phosphate buffered saline (PBS) (pH 7.4), and EDTA were purchased from Fisher Scientific Inc. (Pittsburgh, PA). 5,5-dimethyl-1-pyrroline-N-oxide (DMPO) were purchased from Dojindo Molecular Technologies, Inc. (Rockville, MD). ThioGlo-1 Fluorescent Thiol Reagent is purchased from EMD Millipore Chemical (Darmstadt, Germany), Nanopure water was used throughout.
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