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7 protocols using dimethylsulfoxyde

1

Permethylation of Glycans

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A suspension of sodium hydroxide in dimethylsulfoxyde was prepared by grinding about 0.90 g of dried sodium hydroxide (4 tablets) in 3 mL of dimethylsulfoxyde (Sigma-Aldrich). 0.6 mL of this preparation was added to the lyophilized sample. Then, 0.5 mL of iodomethane (ACS reagent grade, Acros Organics) was added and the sample was incubated under agitation for 1 h. One mL of water was added to quench the reaction. One mL of chloroform and 3 mL of water (LC–MS grade, Thermo Scientific) were then added to the samples and mixed. When two phases appeared clearly, the upper aqueous phase was discarded, and 3 mL of water were added. This step was repeated until pH was neutralized. The chloroform phase containing permethylated glycans was then dried.
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2

Calcium Signaling Assay Protocol

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Dimethyl Sulfoxyde (DMSO-Ref D2438) and Thapsigargin (Tg-Ref: T9033) were purchased from Sigma-Aldrich. Fura-2 QBT™ Calcium Kit was purchased from Molecular Devices (Ref: R8198).
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3

Apoptosis Imaging and Detection

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For in vitro experiments, cell lines were treated with 10μM Erlotinib (AlfaAesar, Ward Hill, Massachusetts, USA), 30μg/mL Cisplatin (Mylan, Saint-Priest, France) or 0.2mL DiMethylSulfOxyde (Sigma Aldrich, Saint-Louis, Missouri, USA) for 18 hours. In order to demonstrate the specificity of the apoptotic signal using Nucview, cell lines were separated in two wells, in which were added ten μM Ac-DEVD-CHO (caspase 3 inhibitor) or DMSO for an additional 15 minutes. Cells were then harvested and a first sequence of images was acquired using the CellVizio® system, by direct application of the optical miniprobe (Alveo-Flex AF2040, Mauna Kea Technologies) onto the cell pellets. Cells were re-suspended in 500μL of culture medium containing Erlotinib (10μM), Cisplatin (30μg/mL) or DMSO (0.2mL), and Ac-DEVD-CHO (10μM, Biotium) or DMSO. Ten minutes after addition of C3-NucView (0.2mM, Biotium), a second sequence of images was acquired using the same technique.
For flow cytometry experiments, cells were prepared and treated with Erlotinib (10μM), Cisplatin (30μg/mL) or DMSO (0.2mL), and Ac-DEVD-CHO (10μM, Biotium) or DMSO as described above. C3-NucView was added at 0.2mM. Cells were then analyzed on Cytomics FC 500 (Beckman Coulter, Fullerton, California, USA) within the hour. Five separate sets of experiments were performed.
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4

Calcium Signaling Assay Protocol

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Dimethyl Sulfoxyde (DMSO-Ref D2438) and Thapsigargin (Tg-Ref: T9033) was purchased from Sigma-Aldrich. Corning® Cell-Tak™ was purchased from Beckton Dickinson (Le Pont de Claix, France) (Ref: 354241). Fura-2 QBT™ Calcium Kit was purchased from Molecular Devices (Berkshire, UK) (Ref: R8198).
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5

Bioactivity Measurements for Natural Compounds

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The bioactivity measurements were performed on a 96-well microplate reader (Perkin Elmer Multimode Plate Reader EnSpire) at the National Center of Biotechnology Research. Gallic acid, Folin-Ciocalteu's Reagent (FCR), aluminum trichloride, 1,1'-diphenyl-2-picrylhydrazyl (DPPH), butylatedhydroxyltoluene (BHT), ascorbic acid, α-tocopherol, butylatedhydroxylanisole (BHA), dimethyl sulfoxyde (DMSO), diammonium salt (ABTS), nitro blue tetrazolium (NTB), neocuproine 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulfonicacid), butyrlcholinesterase from horse serum (BChE, EC 3.1.1.8, 7.8 U/mg, Sigma), acetylcholinesterase from electric eel (AChE, Type-VI-S, EC 3.1.1.7, 827.84 U/mg, Sigma), acetylthiocholine iodide, S-butyrylthiocholine iodide, galantamine, 5,5′-dithiobis (2-nitrobenzoic) acid (DTNB), anis aldehyde, sulfuric acid, and glacial acetic acid were obtained from Sigma Aldrich (Stern-heim, Germany). Potassium persulfate, copper (II) chloride and sodium carbonate were obtained from Biochem Chemopharma. All other chemicals and solvents were of analytical grade . Antibiotics were obtained from Titan Media, India.
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6

Confocal Imaging of Dairy Systems

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Samples for confocal image measurements were prepared as described by Andoyo et al. (2014) . Briefly, the dairy system suspensions at 35°C were labeled using 0.06 µL of rhodamine B isothiocyanate (RITC) per gram protein (from a 85 g L -1 RITC solution in dimethylsulfoxyde, Sigma-Aldrich, St Quentin Fallavier, France) and stirred for 15 min prior to the addition of GDL.
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7

Chemicals and Reagents for Cell Assays

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D(+)-galactose and D(+)-raffinose were purchased from ACROS Organics (Geel, Belgium). Yeast nitrogen base without amino acids and Bacto peptone were purchased from BD Biosciences (Franklin lakes, NJ). D(+)-glucose, Bacto yeast extract, dimethylsulfoxyde (vehicle control), 3,3′5-triiodo-L-thyronine sodium salt (T3), Nutlin-3, Nutlin-3a, FK-506 monohydrate, and the different amino acids complements were purchased from Sigma (St. Louis, MO).
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