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Nitrocellulose membrane

Manufactured by Bio Basic
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Nitrocellulose membranes are a common laboratory tool used for protein and nucleic acid detection and analysis. They are thin, porous sheets made from cellulose treated with nitric acid. Nitrocellulose membranes have a high affinity for proteins, allowing them to bind and immobilize them for further processing and analysis.

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13 protocols using nitrocellulose membrane

1

Liver Protein Extraction and Western Blot Analysis

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Liver tissue samples were homogenized with 5–10 volumes of lysis buffer (Sigma-Aldrich, USA) containing 1 mM phenylmethanesulfonyl fluoride (PMSF) and 1X protease inhibitor cocktail (Sigma-Aldrich, USA). The homogenate was centrifuged at 10836 ×g for 10 min and supernatants were used as the whole protein extract. Total protein was estimated using Bradford method. About 30 μg of the liver protein was separated by 10% SDS-PAGE and then transferred onto a nitrocellulose membrane (0.45 μm, Bio Basic, Inc.) with miniprotein two-gel electrophoresis system (Bio-Rad, USA). The transferred membrane was blocked through incubation with 5% bull serum albumin (BSA) for 3 h at room temperature. The transferred membranes were then blotted with the following primary antibodies at 4°C overnight at dilution of 1 : 1000: phosphor-mTOR (P-mTOR), total-mTOR (T-mTOR), P-AKT, T-AKT, P-AMPK, T-AMPK, P-ERKs, T-ERKs, and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Cell Signaling Technology, Beverly, MA), followed by treatment with horseradish peroxidase-conjugated secondary antibodies diluted 1 : 2000 (Santa Cruz, USA). Immunoreactive bands were visualized with an ECL detection system (GE Healthcare, UK). The intensity of the bands was quantified by scanning densitometry using software Quantity One-4.5.0.
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2

Western Blot Analysis of AMPK Pathway

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A part of liver tissue of each experimental mouse was homogenized in eight volumes of radioimmunoprecipitation assay (RIPA) buffer (Sigma-Aldrich, USA) which contains 1 mM Phenylmethanesulfonyl fluoride (PMSF) and 1x protease inhibitor cocktail (Sigma-Aldrich, USA). The protein concentration was detected by Bradford method, and 30 μg of sample was separated by 10% SDS-PAGE and then transferred onto a nitrocellulose membrane (0.45 μm, Bio Basic, Inc.) with the Mini-Protean two-gel electrophoresis system (Bio-Rad, USA). The blocked membranes with target strips were incubated with primary antibodies at 4°C overnight at dilution of 1 : 1000 as follows: phosphor-AMPK (P-AMPK), total-AMPK (T-AMPK), peroxisome proliferator activated receptor γ coactivator-1α (PGC-1α), phosphofructokinase-1 (PFK-1), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Cell Signaling Technology, Beverly, MA), followed by blotting with horseradish peroxidase-conjugated secondary antibodies diluted 1 : 2000 (Santa Cruz, USA). After visualizing with ECL detection system (GE Healthcare, UK), the intensity of target bands were quantified by using ImageJ.
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3

Quantification of ERK and AKT Signaling Proteins

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The treated cells were lysed with RIPA buffer containing 1% protease inhibitor cocktails and 2% phenylmethanesulfonyl fluoride (PMSF) (all from Sigma-Aldrich). For the detection of ERK translocation, the preparation of cytoplasmic and nuclear extracts was carried out as described in a previous study by Yang et al (21 (link)). After the supernatant collection, the protein concentration was determined using the Bradford method. Proteins were separated on a 10% SDS-PAGE gel and transferred electrophoretically onto nitrocellulose membranes (Bio Basic, Inc., Markham, Ontario, Canada). The transferred membranes were then blotted with primary antibodies (dilution of 1:1,000) to: phosphorylated ERK (p-ERKs), total ERK (t-ERKs), phosphorylated AKT (p-AKT), total AKT (t-AKT), cleaved poly(ADP-ribose) polymerase (PARP), glyceraldehyde 3-phosphate dehydrogenase (GAPDH) and lamin B (Cell Signaling Technology, Inc., Danvers, MA, USA) at 4°C overnight, followed by treatment with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz Biotechnology, Inc., Dallas, TX, USA). Chemiluminescence was detected using ECL detection kits (GE Healthcare, Buckinghamshire, UK). The intensity of the bands was quantified by scanning densitometry using Quantity One 4.5.0 software (Bio Basic, Inc.).
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4

Mitochondrial Cytochrome C Release Assay

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Treated cells were lysed using radioimmunoprecipitation assay buffer (Sigma-Aldrich,
USA) containing 1% protease inhibitor cocktail and 2% phenylmethanesulfonyl fluoride.
Detection of Cyto C release from mitochondria to cytoplasm was performed using
cytoplasmic extracts prepared as described previously (23 (link)). The supernatants were collected, and protein concentrations
were determined by the Bradford method. Proteins were separated using 12% sodium
dodecyl sulfate-polyacrylamide gel electrophoresis and transferred
electrophoretically onto nitrocellulose membranes (Bio Basic, USA). The transferred
membranes were then blotted with antibodies as follows: phospho-ERKs (P-ERKs),
total-ERKs (T-ERKs), phosphor-AKT (P-AKT), total-AKT (T-AKT), Bcl-2, Bax, cleaved
caspase 3, Cyto C, and glyceraldehyde-3-phosphate dehydrogenase (all 1:1,000; Cell
Signaling, USA) at 4°C overnight, followed by treatment with horseradish
peroxidase-conjugated secondary antibodies (Santa Cruz Biotechnology, USA). The
signals were detected with enhanced chemiluminescence detection kits (GE Healthcare,
UK). The intensities of the bands were quantified with scanning densitometry using
the Quantity One 4.5.0 software (Bio-Rad).
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5

Kidney Protein Quantification and Analysis

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One part of collected kidney was homogenized in radioimmunoprecipitation assay buffer (RIPA, Sigma-Aldrich, USA) containing 1% protease inhibitor cocktail (Sigma-Aldrich, USA) and 2% phenylmethanesulfonyl fluoride (PMSF, Sigma-Aldrich, USA). Protein concentrations were determined by Bradford method, and 40 μg proteins were separated by using a 12% SDS-PAGE gel and transferred electrophoretically onto nitrocellulose membranes (0.45 μm; Bio Basic, Inc. USA). The transferred membranes were blotted with primary antibodies at 4°C overnight at dilution of 1 : 500, nuclear factor-κB (NF-κB) receptor and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Santa Cruz, USA), and then they were incubated with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz, USA). Chemiluminescence was detected by using ECL detection kits (GE Healthcare, UK). The intensity of the bands was quantified by scanning densitometry using software Image J.
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6

Protein Expression Analysis in Kidney Tissues

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Collected kidney tissues were homogenized in radioimmunoprecipitation assay buffer (RIPA; Sigma-Aldrich, USA) which contains 1% protease inhibitor cocktail (Sigma-Aldrich, USA) and 2% phenylmethanesulfonyl fluoride (PMSF; Sigma-Aldrich, USA). Protein concentration was analyzed via Bradford method, and 30 µg samples were separated by using a 10% SDS-PAGE gel and transferred electrophoretically onto nitrocellulose membranes (0.45 m; Bio Basic, Inc., USA). After being blocked in 5% bull serum albumin (BSA) for 4 h at 4°C, the membranes were blotted at 4°C overnight with primary antibodies phosphor-nuclear factor-κB (P-NF-κB) receptor, total-NF-κB (T-NF-κB) (1 : 500; Santa Cruz, USA), inhibitor kappa B alpha (IκBα), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Santa Cruz, USA) at dilution of 1 : 500. The membranes were further incubated with horseradish peroxidase-conjugated secondary antibodies (1 : 2000; Santa Cruz, USA). Chemiluminescence was detected by using ECL detection kits (GE Healthcare, UK). The intensity of the bands was quantified by scanning densitometry using software Image J (National Institutes of Health, Bethesda, USA).
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7

Neuroprotective Role of 5zou in 6-OHDA/L-Glu-Induced Cytotoxicity

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DPC12 cells were pre-treated with 20 and 40 µM 5zou for 3 h, and followed with 24-h incubation of 6-OHDA (100 µM) and L-Glu (25 mM). Cells were lysed by radioimmunoprecipitation assay buffer (Sigma-Aldrich; Merck KGaA) containing 2% phenylmethanesulfonyl fluoride (Sigma-Aldrich; Merck KGaA) and 1% protease inhibitor cocktail (Sigma-Aldrich; Merck KGaA). Protein concentrations were determined using a Standard BCA Protein Assay kit (Merck KGaA). Proteins (30 µg) were separated on a 12% SDS-PAGE gel and electrophoretically transferred onto nitrocellulose membranes (Bio Basic, Inc., Markham, ON, Canada). The membranes were blocked in 5% bovine serum albumin at room temperature for 4 h, and then incubated with the following primary antibodies (all diluted 1:1,000) overnight at 4°C: Bcl-2 (ab321224), Bcl-xL (ab7973), and GAPDH (ab8245) (1:1,000; Abcam, Cambridge, UK) at 4°C overnight, followed by incubation with appropriate horseradish peroxidase-conjugated secondary antibodies (sc-2005 and sc-358925) at dilution of 1:2,000 at 4°C for 4 h (Santa Cruz Biotechnology, Inc., Dallas, TX, USA). Chemiluminescence was detected by using enhanced chemiluminescence detection kits (GE Healthcare Life Sciences, Little Chalfont, UK).
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8

Western Blot Analysis of Signaling Proteins

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Treated cells were lysed in radioimmunoprecipitation assay buffer containing 1% protease inhibitor cocktail and 2% phenylmethanesulfonyl fluoride (Sigma-Aldrich). In order to detect cytochrome c (cyto c) release, cytoplasmic extracts were prepared as described previously by Yang et al (20 (link)). A total of 30 μg protein was separated using 10–12% SDS-PAGE and electrophoretically transferred onto nitrocellulose membranes (pore size, 0.45 μm; Bio Basic, Inc., Markham, ON, Canada). The transferred membranes were then blotted with antibodies against phosphorylated (P)-ERKs, total (T)-ERKs, P-AKT, T-AKT, P-glycogen synthase kinase-3β (GSK3β), T-GSK3β, B-cell lymphoma 2 (Bcl-2), Bcl2-associated X protein (Bax), cyto c and GAPDH at dilutions of 1:1,000 (Cell Signaling Technology, Inc., Danvers, MA, USA) at 4°C overnight. Membranes were then incubated with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA) for 3 h at 4°C. Chemiluminescence was detected using enhanced chemiluminescence detection kits (GE Healthcare, Amersham, UK). The intensity of the bands was quantified by scanning densitometry using Quantity One 4.5.0 software (Bio-Rad Laboratories, Inc.).
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9

Kidney Protein Expression Analysis

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One part of the kidney tissue was homogenized in a radioimmunoprecipitation assay buffer (RIPA; Sigma-Aldrich, USA) containing 1% protease inhibitor cocktail and 2% phenylmethanesulfonyl fluoride (Sigma-Aldrich, USA). Protein concentrations were determined by the Bradford method, and 40 μg proteins were separated using 10% SDS-PAGE gel and transferred electrophoretically onto nitrocellulose membranes (0.45 μm; Bio Basic, Inc., USA). The transferred membranes were blotted with primary antibodies at 4°C overnight at a dilution of 1 : 1000: phosphor-AKT (ab131443), total-AKT (ab200195), phosphor-GSK-3β (ab75745), total-GSK-3β (#32391), and glyceraldehyde-3-phosphate dehydrogenase (#2118) (Abcam, Cambridge, UK) and then incubated with horseradish peroxidase-conjugated secondary antibodies (Santa Cruz, USA). Chemiluminescence was detected using ECL detection kits (GE Healthcare, UK). The intensity of the bands was quantified by scanning densitometry using Image J software (National Institutes of Health, Bethesda, USA).
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10

Western Blot Analysis of Tissue Proteins

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Both lymph node and brain tissues were extracted by RIPA buffer (Beyotime, China) containing 1% phenylmethanesulfonyl fluoride (PMSF; Beyotime, China) and 1% protein inhibitor (PI; Beyotime, China). The protein concentrations were determined using the Pierce™ BCA Protein Assay Kit (Thermo Scientific). Proteins were separated by 4–12% SDS‒PAGE gel electrophoresis and then transferred electrophoretically onto nitrocellulose membranes (0.45 µm; Bio Basic, Inc.). For immunoblotting, the membrane was blocked with 5% nonfat milk. After incubation with a specific primary antibody, a horseradish peroxidase-conjugated secondary antibody was applied. The positive immune reaction signal was detected by ECL detection kits (GE Healthcare, UK).
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