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Protein standard marker

Manufactured by Bio-Rad
Sourced in United States

The Protein Standard marker is a tool used in protein gel electrophoresis to determine the molecular weights of unknown protein samples. It contains a mixture of pre-stained protein standards with known molecular weights, allowing for the estimation of the molecular weights of proteins in a sample.

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2 protocols using protein standard marker

1

Gel Filtration Chromatography for Larval Settlement

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Gel filtration chromatography: The >50K CgSE active fraction (6 mg) was applied to a Superdex 200 10/300 GL column (GE Healthcare, Tokyo, Japan) equilibrated with 0.15 M NaCl using a 500 μL loop and eluted with the same buffer at a rate of 0.25 mL min−1, using an AKTA explore 10S- FPLC system (GE Healthcare, Tokyo, Japan). A total of 35 tubes of 0.5 mL were collected and pooled into six molecular range fractions: F1, F2, F3, F4, F5, and F6.
Larval Settlement Assay: The Gel filtration-eluted fractions were subjected to a larval settlement assay at various extract amounts of 1 μg (n = 3), 10 μg (n = 6), and 50 μg (n = 5). Larval assay replications for each extract amount varied due to the limited protein yield from the eluted fractions. Several 6-well plates were pre-coated with the test extracts and the larval assay was carried out as described earlier. All data were presented as the mean ± standard deviation (SD).
SDS-PAGE Analysis: For SDS-PAGE analysis on the active fractions >50K CgSE, F2, and F3, 10 µg of each sample under reducing conditions were loaded in each lane on a 10% acrylamide gel for 1 h at 200 volts [79 (link)]. A pre-stained Protein Standard marker (Broad range, Bio-Rad, Hercules, CA, USA) was also loaded on the gel. Following SDS-PAGE, all the protein bands were visualized by the Stains-all staining method following the manufacturer’s instruction manual.
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2

Protein Quantification and Western Blotting

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Protein estimation results were used to calculate 80 μg (150 μg for cell lysate) of total protein per well. The samples were mixed with 10× sample buffer (with freshly added β-mercaptoethanol in a 1:10 ratio) and were allowed to heat at 95°C for 5 minutes. After loading the samples into each well, the gel (8%) was run at 200 V for 45 minutes using freshly prepared running buffer in a Mini PROTEAN® 3 gel tank (Bio-Rad Laboratories Inc). A protein standard marker (Bio-Rad Laboratories Inc) was used to compare the molecular weight of resulting bands from samples.
Using the Western blotting technique, proteins from a sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) gel were transferred onto polyvinylidene fluoride (Amersham™ Hybond™ enhanced chemiluminescence; GE health care and life sciences, Australia) membrane. After probing the membrane using specific antibodies, it was dried and activated in dark using 1 mL total enhanced chemiluminescence detection system solution (GE Healthcare Bio-Sciences, Pittsburgh, PA, USA) for 2 minutes. The membrane was then viewed using Bio-Rad ChemiDoc with an XRS Camera. Images were captured and processed using Quantity One software.
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