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7 protocols using alexa fluor 488 anti cd11b

1

Neutrophil Priming in Sepsis Model

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Blood samples were collected by saphenous venipuncture, both at 24 hours after sham or hemorrhage procedure (prior to infection) and at 24 hours after intratracheal instillation of saline or P. aeruginosa. After erythrocyte lysis with ammonium chloride solution, samples were stained with the following antibodies: APC anti-CD54, Alexa Fluor 488 anti-CD11b, PE anti-CXCR2, Brilliant Violet 421 anti-Ly6G (all from BioLegend). Samples were analyzed by flow cytometry as described above. Group sizes were n = 3 for all flow cytometry analyses of neutrophil priming (pre- and post-infection), and were n = 10 for analyses of circulating neutrophil count.
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2

Multi-Color Flow Cytometry Panel

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The following antibodies were used for flow cytometry: Alexa Fluor488-anti-CD11b, allophycocyanin-anti-CD33, PE/Dazzle594-anti-HLA DR, PE/Cy7-anti-CD14, PercpCy5.5-anti-CD66b, Brilliant Violet 510-anti-CD3, Brilliant Violet 650-anti-CD19 (all from Biolegend).
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3

Multiparametric Flow Cytometry Panel

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For flow cytometry, Alexa Fluor 488/anti-CD11b, APC or Alexa Fluor 700/anti-CD33, BV605/anti-CD3, BV510/anti-CD19, PerCPCy5.5/anti-CD66b, PE/Cy7/anti-CD14, PE/Dazzle594/anti-HLA DR (all from Biolegend); APC-eFluor 780/anti-CD11b, PE/anti-TLR2, Alexa Fluor 488/anti-TLR4 (all from Thermo Fisher Scientific) and APC/anti-IL27R from R&D systems were used. For live/dead staining we used LIVE/DEAD™ Fixable Aqua Dead cell stain, and for reactive oxygen species CellROX™ Deep Red Reagent, both from Thermo Fisher Scientific. For immunoblotting, anti- IL-27A (Abcam), phosphorylated (p) NF-κB, NF-κB, STAT1 and pSTAT1 (all from R&D Systems), STAT3 (Novus) pSTAT3 and GAPDH (Cell Signaling Technology) were used.
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4

Multiparameter Flow Cytometry Profiling of Immune Cells

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Antibodies used for flow cytometry were Alexa Fluor488-anti-CD11b, PerCP-eF710/PE/or PE-Dazzel594-anti-HLA DR (clone L243), eF450-anti-HLA DR (clone LN3) PE/Cy7-anti-CD14, APC-anti-CD33, BV510-anti-CD3, BV605-anti-CD19, PerCP-Cy5.5-anti-CD66b, Alexa Fluor700 or PerCP-Cy5.5-anti-IFNγ, APC/Cy7-CD38, PerCP-Cy5.5-anti-CD69, PE-anti-CX3CR1, -anti-B7-H4, -anti-PD-L1, -anti-B7-H3, -anti-PD-L2, -anti-ICOS-L (all from Biolegend, San Diego, CA); FITC- or APCeF780-anti-CD4, Alexa Fluor700- or eF450-anti-CD25, PE-anti-FoxP3 and eF450-anti-IL10 (all from eBioscience); PE-anti- phospho-Zap70(pY292), PE-anti-phospho-Akt(pS473) from BD Biosciences. For neutralization studies, mAb to IL-10, IL-6 or rat IgG isotype (10 μg/mL, Biolegend) and polyclonal goat anti-IL-27 or normal goat IgG control (10 μg/mL R&D Systems) control were used.
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5

Generation of Bone Marrow-Derived Macrophages

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Fresh bone marrow cells were used to generate BMDMs, using L929-cell conditioned
medium (LCCM) as a source of macrophage colony stimulating factor [23 (link)]. Cells were resuspended in 10 ml bone marrow
differentiation media (R20/30; composition: RPMI1640 supplemented with 20% fetal
bovine serum, 30% LCCM, 100 U/ml penicillin, 100 mg/ml streptomycin and 1 mM
sodium pyruvate) and were seeded in untreated 90×15 mm culture dishes and
incubated at 37°C in a 5% CO2 atmosphere. Three days after
seeding, an extra 10 ml of fresh R20/30 were added per dish and incubated for additional 3
days. On day 6, the attached cells were washed and detached with 10 ml of cold sterile
PBS. Cells were centrifuged at 200 × g for 5 minutes and resuspended in 10 ml of
BMDM cultivation media (R10/5; composition: RPMI 1640, 10% fetal bovine serum,
5% LCCM). Cells were seeded at a density of 106/ml on the day before
the experiments. The macrophage purity of these preparations was usually
>95% as assessed by flow cytometry using murine macrophage antibody Alexa
Fluor 488 anti-CD11b and APC anti- F4/80 (Biolegend). For infection with
P.gingivalis, a multiplicity of infection (MOI) of 100 was used for all
the experiments as described in the figure legends.
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6

Quantifying Pulmonary Neutrophil Responses

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Twenty-four hours after receiving saline or P. aeruginosa, mice were euthanized and bronchoalveolar lavage (BAL) was obtained by repeated instillation/withdrawal of ice cold 1mL PBS containing 5mM EDTA and 0.5% BSA (total volume collected 4-5mL per mouse). BAL samples were stained with the following antibodies to identify neutrophils: APC/Cy7 anti-Ly6G, Alexa Fluor 488 anti-CD11b, PE anti-CXCR2 (all from BioLegend). Samples were analyzed using a MACSQuant Analyzer 10 flow cytometer (Miltenyi) and post-acquisition analysis was performed using FlowJo software (Becton Dickinson, Franklin Lakes, NJ). Group sizes for analyses of BAL neutrophils were: Hem-Saline: n = 4; Sham-PA, Hem-PA: n = 7.
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7

Multicolor Flow Cytometry Panel Design

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The following antibodies/conjugates were purchased: Allophycocyanin (APC)-conjugated anti-CD3ε (TONBO, Cat# 20–0032, RRID:AB_2621538, Burlingame, CA), fluorescein isothiocyanate (FITC)-conjugated anti-CD8α (BioLegend, Cat# 100706, RRID:AB_312745, San Diego, CA), APC-rat anti-CD45R/B220 (BioLegend, Cat# 103212, RRID:AB_312997), Brilliant Violet (BV) 421-conjugated anti-CD11c (BioLegend, Cat# 117329 RRID:AB_10897814), AlexaFluor488-anti-CD11b (BioLegend), FITC-anti-CD19 (BioLegend, Cat# 152404 RRID:AB_2629813), FITC-anti-CD3ε (BioLegend, Cat# 100203 RRID:AB_312660), APC-anti-CD184 (CXCR4; BioLegend, Cat# 146508 RRID:AB_2562785), phycoerythrin (PE)-conjugated anti-MHC class II (BD Biosciences, San Jose, CA), PE-anti-CD86 (BioLegend, Cat# 105106 RRID:AB_313159), mouse anti-EEA1 (eBioscience, San Diego, CA), Alexa488-labeled goat anti-mouse IgG, and FITC-anti-LAMP1 (BioLegend, Cat# 121606 RRID:AB_572007).
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