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Protein extraction kit

Manufactured by Keygen Biotech
Sourced in China

The Protein Extraction Kit is a laboratory tool designed to isolate and purify proteins from biological samples. It consists of a set of reagents and protocols that facilitate the efficient extraction and recovery of proteins, a fundamental step in various biochemical and analytical applications.

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105 protocols using protein extraction kit

1

Quantification of ACE2 and PD-L1 Proteins

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Cells were plated in 35-mm dishes (6 × 105 cells/dish). 48 h after transfection, all cells were harvested the proteins with lysis buffer. SDS–polyacrylamide gel electrophoresis and Western blotting analysis were performed as standard protocols. For nuclear and cytoplasmic protein extraction, nuclear and cytoplasmic Protein Extraction Kit were used (KeyGEN BioTECH, Nanjing, China). The primary antibodies for ACE2 (1:1000 dilution, Cat. ab15348, Abcam), PD-L1 (1:1000 dilution, Cat. 17,952–1-AP, ProteinTech) and Tubulin (1:2000 dilution, Cat. 10,094–1-AP, ProteinTech) were used. Expression levels of proteins were normalized to Tubulin for each sample.
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2

Colonic Protein Profiling in Mice

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After obtaining the colon tissue of the mouse, it was quickly stored in liquid nitrogen. Total colonic tissue proteins were obtained with a protein extraction kit (KeyGen Biotech, China). SDS\PAGE technology was selected to isolate the proteins. We used methanol to activate the PVDF membrane for one minute. Next, the target protein was transferred to the PVDF membrane. The antibody was incubated at 4℃ overnight. A Multi-Spectral Imaging system (UVP, Cambridge, UK) was used to detect and quantify the bands.
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3

Lipid-based nanoparticles for iron chelation

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DHA was purchased from Aladdin Co. Ltd. (Shanghai, China). 1, 2-dioleoylsn-glycero-3-phosphoethanolamine (DOPE), cholesteryl hemisuccinate (CHEMS), BSO and FeSO4•7H2O were obtained from Sigma-Aldrich (St. Louis, MO, USA). Deferiprone (DEF) was purchased from Meyer Chemical Technology Co. Ltd (Shanghai, China). ROS Detection Kit, Glutathione Assay Kit, Annexin V-FITC/Propidium Iodide (PI) Cell Apoptosis Detection Kit, dihydroethidium (DHE), and Protein Extraction Kit were obtained from KeyGen Biotech. Co. Ltd. (Nanjing, China). BCA Protein Assay Kit was purchased from Beyo-time Institute of Biotechnology (Shanghai, China). The primary antibodies and secondary antibody against TfR and GAPDH were acquired from Affinity Biosciences (Changzhou, China). Fluorescein isothiocyanate (FITC), CellROX, LysoTracker Red, MitoTracker Red, Hoechst 33342, acridine orange (AO) and LIVE/DEAD™ Fixable Green Dead were obtained from Invitrogen (ThermoFisher Scientific, USA). Iron Colorimetric Assay Kit was purchased from BioVision (San Francisco, USA). 1, 2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(polyethylene glycol) 2000-transferrin (DSPE-PEG2000-Tf) was synthesized by Xi-An Ruixi Biological Technology Co., Ltd. (Xi-An, China). Ultrapure water was prepared using a Millipore Simplicity System (Millipore, Bedford, USA).
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4

Protein Expression Analysis by Western Blot

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Total proteins were extracted using the protein extraction kit (KeyGen Biotech, China) and were transferred onto a polyvinylidene fluoride membrane (Millipore, Germany) after being separated on 10% SDS-PAGE. Anti-bax, anti-bcl-2, anti-cytochrome c (Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-β-actin (Bioeasy, Korea), anti-caspase-3 (Abcam, USA), anti-HDAC1 (Cell Signaling Technology, USA), and anti-acetyl-histone H4 (Upstate) were used to detected proteins and the homologous secondary antibody conjugated with horseradish peroxidase were then used to detect the primary antibodies. Immunoreactive bands were cast to X-ray film (Carestream, China) after shining by a chemiluminescent substrate (Millipore, Germany). ImageJ software (National Institutes of Health, Bethesda, MA, USA) was used to calculate the relative expression of proteins.
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5

Protein Extraction and Expression Analysis in Ischemic Cortex

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Total protein and cytosolic and nuclear protein in the ischemic cortex tissue were extracted with the corresponding protein extraction kit (Key GEN Biotech, China) following the manufacturer's protocols, and the protein quantity was assessed with the BCA protein assay kit (Key GEN Biotech, China). Equal protein quantities were separated using sulfate polyacrylamide gel electrophoresis (8%–12%), prior to transfer to polyvinylidene difluoride membranes (Millipore, USA). After that, they were blocked for 2 h in 5% milk before being exposed to HMGB1, TLR4, Bax, Bcl‐2, NF‐κB p65, Cleaved Caspase‐3, GAPDH and Lamin B antibodies for an entire night at 4°C. The blots were thrice rinsed for 10 min each, before 1 h incubation in matched horseradish peroxidase‐conjugated secondary antibody at room temperature 2 h. Following three more washes in TBST buffer, protein visualization was done on X‐ray film employing the Super ECL Plus Detection Reagent (Key GEN Biotech, China). Protein band quantification was done via Image J.
Significantly, during the operation, the ipsilateral ischemic cerebral cortex tissues were obtained, respectively, both were 1 cm3 in size. Each sample was divided into two parts. One part was stored in liquid nitrogen and prepared for protein and total RNA, whereas the other part was fixed in 4% buffered formalin and prepared for the histomorphological analysis.
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6

Protein Expression Analysis by Western Blot

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A protein extraction kit (KeyGEN, Nanjing, China) was used to lyse the cells. Protein concentrations were measured with a BCA kit (Beyotime, Shanghai, China). The proteins were separated by SDS–PAGE and transferred to a PVDF membrane. The membrane was blocked with 5% skim milk for 1 h at room temperature and was then incubated with antibodies against AMPK, p-AMPK (Thr172), mTOR, p-mTOR (Ser2448), NF-κBp65, phospho-NF-κBp65 (Ser536), p38 MAPK, phospho-p38 MAPK (Thr180/Tyr182), p70S6 kinase, phospho-p70 S6 kinase (Thr389), AKT, phospho-AKT (Ser473), Smad2, phospho-Smad2 (Ser465/467), β-actin, Beclin-1, LC3B, SQSTM1/p62 (Cell Signaling Technology, Beverly, MA, USA), fibronectin, α-smooth muscle actin (α-SMA), GAPDH, and human collagen (type I) (Thermo Fisher Scientific, Rockford, IL, USA) at 4 °C overnight. The membrane was then incubated with a goat anti-rabbit secondary antibody or a horse anti-mouse secondary antibody (Cell Signaling Technology, Boston, MA, USA) at room temperature for 1 h. Finally, the signals were examined using a chemiluminescence kit (Bio–Rad, Hercules, CA, USA).
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7

Western Blot Analysis of Apoptosis Markers

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Total protein was extracted from cells and uterine tissue with a protein extraction kit (KeyGEN, Changchun, China) according to protocols from the supplier. Protein concentration was determined using a bicinchoninic acid assay (KeyGEN). Equal concentrations of total protein were separated by SDS-PAGE (12%). Proteins were transferred onto polyvinylidene difluoride membranes and were blocked for two hours with TBST (50 mmol/L Tris, pH 7.6, 150 mmol/L NaCl, and 0.1% Tween 20) containing 5% BSA. The membranes were incubated with primary antibodies diluted in TBST overnight at 4 °C. Antibodies against cytochrome C (ab133504), caspase-3 (ab184787), BAX, (ab32503), and Bcl-2 (ab182858) were from Abcam (Shanghai, China). After washing three times in TBST, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies for two hours at room temperature and then washed three times for 10 min. Protein bands were visualized by exposure to an enhanced chemiluminescence detection system imager (Tanon Biotech, Shanghai, China) with an enhanced chemiluminescence solution (DiNING, Beijing, China). The relative intensity of each band was assessed by Image J 1.47 v software.
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8

Western Blot Analysis of Apoptotic Proteins

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The expression levels of Bax, Bcl-2 and cytochrome c proteins were measured by western blotting according to the standard protocol (28 (link)). SMMC-7721 cells (2×106) were seeded into a 10-cm plate and cultured overnight. Following treatment with GA (0, 6.25, 12.5 and 25.0 µg/ml) for 48 h, whole-cell protein or mitochondrial fractions were isolated using the protein extraction kit (Nanjing KeyGen Biotech Co., Ltd.). Protein concentration was measured using the bicinchoninic acid protein assay kit (Nanjing KeyGen Biotech Co., Ltd.). Protein (50 µg) was separated using 12% SDS-PAGE with the Mini-PROTEAN® system (Bio-Rad Laboratories, Inc., Hercules, CA, USA) and subsequently transferred onto a polyvinylidene difluoride membrane (Gene Tech Biotechnology Co., Ltd., Shanghai, China). The membranes were incubated with the specific aforementioned antibodies (1:500 dilution) against Bax, Bcl-2 and cytochrome c for 2 h at 37°C. Following washing with Tris-buffered saline and Tween 20, the membranes were incubated with peroxidase-conjugated IgG goat anti-mouse or anti-rabbit secondary antibody (1:1,000 dilution; OriGene Technologies, Inc.) for 30 min at 37°C, respectively. Immunoreactive proteins were visualized using 3,3-diaminobenzidine staining. β-actin served as a control.
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9

Protein Expression Analysis in Orbital Tissue

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Protein was extracted from orbital tissue and OFs with a protein extraction kit (KeyGEN, Nanjing, China). The concentration was measured by using the BCA method (Cwbiotech, Beijing, China). Protein lysates was electrophoresed, transferred to a membrane, blocked, and incubated with primary and secondary antibodies. Primary antibodies included COL1A1, MMP2, GAPDH, β-actin (Cell Signaling Technology, Beverly, MA, USA), and RLN2 (Abcam, Waltham, MA, USA). Secondary antibodies were purchased from CST. Finally, the blots were imaged with a chemiluminescence imager (Tanon Science &Technology Co. Ltd., Shanghai, China).
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10

Protein expression analysis by Simple Western

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A protein extraction kit (KeyGEN, Nanjing, China, #KGP250, #KGP950) was used to lyse the cells. Protein concentrations were measured with a BCA kit (Beyotime, Shanghai, China, #P0010). Protein separation and detection were performed using an automated capillary electrophoresis system (Simple Western system and Compass software; ProteinSimple, San Jose, CA, USA, Version: 5.0.0). Wes Separation Capillary Cartridges for 12–230/66–440 kDa (ProteinSimple, San Jose, CA, USA, #SM-W004/SM-W008) were used for the proteins. The following primary antibodies were used: GAPDH (#5174S), α-SMA (#19245S), FN1 (#26836S), COL1A1 (#39952S), CTGF (#86641S), Smad2 (#5339S), phospho-Smad2 (p-Smad2, #3108S), Smad3 (#9523S), phospho-Smad3 (p-Smad3, #9520S), ERK (#4695S), phospho-ERK (p-ERK, #4370S), and Snail (#3879S) (all from Cell Signaling Technology, Boston, MA, USA). Signals were detected with an HRP-conjugated anti-rabbit secondary antibody (ProteinSimple, San Jose, CA, USA, #DM-001) and were visualized using Compass for SW software.
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