The largest database of trusted experimental protocols

Kapa qrt pcr kit

Manufactured by Merck Group
Sourced in United States

The KAPA qRT-PCR kit is a laboratory reagent designed for the quantitative reverse transcription polymerase chain reaction (qRT-PCR) process. It contains the necessary components to perform this molecular biology technique, which is used to measure the expression levels of specific RNA targets.

Automatically generated - may contain errors

8 protocols using kapa qrt pcr kit

1

Quantification of miR-605-3p Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
The miR-605-3p levels in the tissues and cell lines have been measured by qRT-PCR. The TRIzol reagent was used to perform the extractions of the total RNA in the tissues or HCC cell lines. The concentration of the total RNAs was measured by a spectrophotometer. 1 μg of RNA was used to transcribe as cDNA, and a PrimeScript® RT Reagent Kit performed the cDNA transcribe with random hexamers. The reaction systems (10 μL) of qRT-PCR were prepared according to the operational instruction of a KAPA qRT-PCR Kit (Sigma-Aldrich, Missouri, USA). U6 was used as the endogenous controls. The following conditions were used: denaturation at 95°C for 3 min, followed by amplification for 40 cycles at 95°C for 12 s and at 53°C for 40 s and 70°C for 30 s. The relative levels of miRNAs were calculated with the 2−(ΔΔCt) method. The primers of miR-605-3p and U6 were synthesized and purified by RiboBio (Guangzhou, China). The primer sequences of miR-605-3p, KIF3B, and U6 are listed in Table 1.
+ Open protocol
+ Expand
2

RNA Extraction and qRT-PCR Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The total RNAs of the tissues or cells were extracted with TRIzol reagent, and the concentration of the extracts were measured by UV spectrophotometry. The total RNAs were retranslated as cDNA by using the TaqMan MicroRNA Reverse Transcription Kit (Applied Biosystems, Foster city, CA). According to the instructions of the KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA), the reaction system was prepared for PCR. The reaction conditions included denaturation at 95°C for 3 min, followed by amplification for 40 cycles at 95°C for 12 s, at 60°C for 40 s, and at 70°C for 30 s. The relative expression levels of the related factors were calculated with with the 2−(ΔΔCt) method. The information of the primers is listed in Table 1.
+ Open protocol
+ Expand
3

Quantifying miR-466 Expression in Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
The miR-466 levels in the tissues and cell lines were measured by qRT-PCR. The TRIzol reagent was used to perform the extractions of the total RNAs in the tissues or HCC cell lines. The concentrations of the total RNAs were measured by spectrophotometry. After that, the total RNAs were transcribed as cDNA via PrimeScript® RT Reagent Kit (Thermo Fisher, Massachusetts, USA). The primers were synthesized and purified by Synbio Technology (Suzhou, China). The reaction systems (10 μL) of qRT-PCR were prepared according to the operational instruction of a KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA). U6 was used as the endogenous control. The following conditions were used: denaturation at 95°C for 3 min, followed by amplification for 40 cycles at 95°C for 12 s, at 53°C for 40 s, and 70°C for 30 s. The relative levels of miRNAs were calculated with the 2−(ΔΔCt) method. The primers of miR-466 and U6 were synthesized and purified by RiboBio Co., Ltd. (Guangzhou, China). The primer sequences of miR-466 and U6 are given in Table 1.
+ Open protocol
+ Expand
4

miR-429 Expression Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
TRIzol purchased from Generay Biotech (Shanghai, China) were utilized to extract total RNA extraction from cells, and the concentration of extracts was measured by ultraviolet spectrophotometry. A PrimeScript® RT reagent Kit (Thermo Fisher, Massachusetts, USA) was used for the reverse transcription of the total RNA. 1 μL of the primers (10 μmol/L) of miR-429 synthesized and purified by Synbio Technology (Suzhou, China) were configured the reaction system according to the instruction of KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA). The primer sequences of U6 and miR-429 are shown in Table 1.
+ Open protocol
+ Expand
5

Quantitative Analysis of miR-125a-3p Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
The total RNAs, extracted by Trizol reagent from the cells or tissues, were used to transcribed into cDNA with a PrimeScript® RT reagent Kit (Thermo Fisher, Massachusetts, USA). The primers synthesized by Synbio Technology (Suzhou, China) were used to the qRT-PCR reaction. The reaction systems (10 µL) were prepared following the operational instruction of KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA). The reaction condition included pre-denaturation at 95oC for 30s, 95°C for 5s, and 60°C for 30s for a total of 40 cycles. Moreover, U6 was used as the control in qRT-PCR. The primer sequences of miR-125a-3p and U6 have been listed in Table 1. qRT-PCR was used to detected the expression level of miR-125a-3p in RA-tissues and RA-FLS.
+ Open protocol
+ Expand
6

Quantification of miR-651-3p Expression in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The total RNAs were extracted from the tissues and cells with TRIzol reagent, and the concentrations of the extracts were measured by ultraviolet spectrophotometry. 1 μg of RNAs was reversed as cDNA with TaqMan MicroRNA Reverse Transcription Kit (Applied Biosystems, Foster City, CA). The primers were synthesized and purified by RiboBio (Guangzhou, China). 10 μL of reaction system was prepared according to the instructions of the KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA). The reaction conditions included the denaturation at 95°C for 3 min, followed by amplification for 40 cycles at 95°C for 12 s, 56°C for 40 s, and 70°C for 30 s. The relative expression levels of miR-651-3p were calculated with the 2−(ΔΔCt) method. The primers of miR-651-3p, ATG3, and U6 are listed in Table 1.
+ Open protocol
+ Expand
7

Quantifying miR-124a and BRD4 Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
The levels of miR-124a and BRD4 in the whole blood and cells were measured by qRT-PCR. Total RNA was isolated from serum samples using a miRVana PARIS kit (Ambion, Austin, TX, USA) according to the manufacturer's instructions. The cells treated with TRIzol reagent for extraction of total RNAs, and adherent cells were treated with trypsase before RNA extraction. After that, the total RNA in the extracts were transcribed as cDNAs by a PrimeScript® RT reagent Kit (Thermo Fisher, Massachusetts, USA). The primers of miR-124a and BRD4 synthesized by a PrimeScript® RT reagent Kit (Thermo Fisher, Massachusetts, USA) were used in the experiment. The reaction systems (10 μl) of qRT-PCR were prepared according to the operational instruction of a KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA). U6 was used as the endogenous controls. The following conditions were used: denaturation at 95°C for 3 min, followed by amplification for 40 cycles at 95°C for 12 s and at 53°C for 40s, and 70°C for 30s. The relative levels of miRNA or mRNA were calculated with the 2−(ΔΔCt) method [14 (link)]. The primer sequences of miR-124a, BRD4, and U6 are listed in Table 1.
+ Open protocol
+ Expand
8

Quantitative Analysis of miR-1226-3p

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNAs of the tissues or cells were extracted by a TRIzol reagent. After that, the extracts were transcribed into cDNA by a PrimeScript® RT reagent Kit (Thermo Fisher, Massachusetts, USA). The primers of miR-1226-3p were synthesized and purified by Synbio Technology (Suzhou, China). According to the operation instruction of the KAPA qRT-PCR kit (Sigma-Aldrich, Missouri, USA), the reaction systems (10 μl) were prepared for qRT-PCR, and the reaction conditions included predenaturation at 95°C for 30 s, 95°C for 5 s, and 60°C for 30s for a total of 40 cycles. U6 was used as the control of miR-1226-3p. The sequences of forward and reverse primer of miR-612 and U6 have been shown in Table 1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!