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6 protocols using gapdh

1

Comprehensive Western Blot Analysis of Signaling Proteins

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Western blot was performed as described previously (9 (link)). Samples (20 μg) were run on a 10% SDS-PAGE gel followed by blotting to a nitrocellulose membrane. Membranes were blocked and incubated with the following antibodies: TRPV4 (ACC-034, Alomone Labs), SMAD3 (9523, Cell Signaling Technology), p-SMAD 3 (9520, Cell Signaling Technology), ERK (4695, Cell Signaling Technology), p-ERK (4370, Cell Signaling Technology), JNK (9252s, Cell Signaling Technology), p-JNK (4671s, Cell Signaling Technology), P38 (9212s, Cell Signaling Technology), p-P38 (4511s, Cell Signaling Technology), AKT (4691,Cell Signaling Technology), p-AKT (4060, Cell Signaling Technology), STAT3 (9132, Cell Signaling Technology), and p-STAT3 (9131, Cell Signaling Technology). Corresponding secondary antibodies conjugated to horseradish peroxidase were used for detection. Staining was detected using chemiluminescence and quantified by Image Lab software (Bio-Rad). All expression data was provided relative to GAPDH (diluted 1:500, Aspen) staining for the same samples on the same gels.
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2

Western Blot Analysis of Phosphorylated STAT3

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Total protein samples were extracted from tissues or whole cells by the standard procedure. Samples (20 μg) were run on a 10% SDS-PAGE gel followed by blotting to a nitrocellulose membrane. After blocking, the membranes were probed with anti-Tyr705 phosphorate STAT3 (P-STAT3) or total STAT3 (T-STAT3; diluted 1:1000; Cell Signaling Technology) overnight at 4°C. The band intensity was assessed using the Image Lab software (Bio-Rad, Richmond, CA) and referenced to GAPDH (diluted 1:500; Aspen, Wuhan, China).
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3

Western Blot Analysis of RUNX2, HMGB1 in BEAS-2B Cells

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Proteins were extracted from BEAS-2B cells using RIPA buffer (Servicebio, China). Fifty micrograms of extracted proteins were separated using 10% SDS-PAGE, and the separated proteins were transferred onto polyvinylidene difluoride (PVDF) membranes (Roche, Germany). The membranes were first probed with indicated primary antibodies. Antibodies used in Western blot were: RUNX2 (Abcam, ab23981, 1:1000 dilution), HMGB1 (Proteintech, 10829-1-AP, 1:2000 dilution), GAPDH (Aspen, 1:2000 dilution). Then antibodies were detected using horseradish peroxidase-conjugated goat anti-rabbit IgG (Aspen, 1:4000 dilution) secondary antibody followed by ECL Western blot detection reagent (MedChemExpress, USA). Densitometry was assessed using ImageJ (National Institutes of Health, USA) and normalized to GAPDH.
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4

Protein Expression Analysis of Liver Tissue

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Liver tissues (30–100 mg) were homogenized and the protein liquid was extracted. The proteins were separated and transferred to the polyvinylidene difluoride (PVDF) membranes (Millipore, Billerica, MA). The PVDF membranes were incubated with primary antibody overnight at 4°C. The antibodies included: α-SMA (1:1,000; Servicebio Technology, Wuhan, China), fibronectin (FN), collagen I and connective tissue growth factor (CTGF) (1:1,000; BOSTER Biological Technology, Wuhan, China), TGF-β1 and Smad2/3 and P-Smad2/3 (1:1,000; Cell Signaling Technology Inc., Danvers, MA), GAPDH and β-actin (1:1,000; Aspen Biological, Wuhan, China). Then, the PVDF membranes were incubated with the anti-rabbit IgG secondary antibody (1:6,000; Aspen Biological, Wuhan, China) at room temperature for 1 hour. Finally, the proteins were detected with the Super Signal West Pico plus Chemiluminescent Substrate (Thermo Fisher Scientific, Waltham, MA).
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5

Western Blot Analysis of Signaling Proteins

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Total protein was extracted after cell lysis by RIPA lysis buffer (Beyotime Biotechnology, Shanghai, China), and the protein concentration was detected using a BCA protein assay kit (Beyotime). Equal amounts of protein were added to the SDS polyacrylamide gel and transferred to a PVDF membrane (Millipore, Billerica, MA, USA). The membranes were blocked with 5% skim milk powder in TBST solution for 1 h and then incubated with primary antibodies overnight at 4 °C. Antibodies for the following were used and diluted following the manufacturer’s instructions: Bmi1 (#6964, 1:1000), AKT (#9272, 1:1000), p-AKT (phospho Ser473,#4060, 1:2000), p38 MAPK (#8690, 1:1000), p-p38 MAPK (phospho Thr180/Tyr182, #4511, 1:1000), STAT3 (#4904, 1:2000), and P-STAT3 (phospho Y705; #9145, 1:2000). The antibodies were purchased from Cell Signaling, Danvers, MA, USA, and GAPDH (AS1039, 1:1000) was purchased from Aspen, Wuhan, China. After washing three times with TBST for 10 min each time, the membranes were incubated with secondary horseradish peroxidase-coupled antibody (Aspen), visualized using an ECL kit (ThermoFisher, Waltham, MA, USA) and exposed to a gel imager. GAPDH was used as an internal control, and the gray value of each protein was calculated.
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6

Protein Expression in CHON-001 Cells

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The CHON-001 cells were seeded in 96-well plates. The cells were then lysed using radioimmunoprecipitation assay buffer for 30 min on ice. Proteins were resolved using sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred onto polyvinylidene difluoride membranes. The membranes were blocked with 5% skimmed milk for 2 h and then cultivated with primary antibodies against CCR10, cleaved-caspase-3, MMP-3. MMP-13, Collagen II, Aggrecan, p-PI3K, PI3K, p-Akt, Akt, p-mTOR, mTOR, GAPDH, or β-actin (1:1000, ASPEN) at 4 °C overnight. After washing thrice with Tris-buffered saline with 0.1% Tween® 20 detergent, the membranes were incubated with secondary antibodies for 2 h. Protein signals were visualized using enhanced chemiluminescence detection reagents and quantified using ImageJ software.
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