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52 protocols using gemcitabine hydrochloride

1

Gemcitabine and Clodronate Liposome Protocol

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Gemcitabine hydrochloride (Sigma, St. Louis, MO, USA) was resuspended in sterile normal saline at 10 mg/mL. Clodronate liposomes and PBS liposomes were purchased from clodronateliposomes.org (Haarlem, The Netherlands). The preparation was described earlier [33 (link)]. For in vitro experiments, Gemcitabine hydrochloride (Sigma, St. Louis, MO, USA), was used.
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2

Evaluating Dichloroacetate and Gemcitabine

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All tested compounds were dissolved in DMSO just before the experiment, and a calculated amount of drug solution was added to the cell growth medium to a final solvent concentration of 0.5%, which had no detectable effects on cell viability. Dichloroacetate (DCA), 2,2-dichloroacetophenone (DAP) and gemcitabine hydrochloride were purchased by Merck KGaA (Darmstadt, Germany).
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3

Hyperthermia and Pharmacological Treatments

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Hyperthermia was applied in a 42 °C water bath at 5% CO2 for one hour, unless specified otherwise. N-acetyl-l-cysteine, Trolox, DMSO, MitoQ, and tetrathiomolybdate (all from Merck) were present from 6 h before until 24 h after the hyperthermia treatment. Elesclomol (Selleck, Houston, TX, USA), epirubicin hydrochloride, mitomycin C, gemcitabine hydrochloride, menadione, and hydrogen peroxide (all from Merck) were added 5 min prior to hyperthermia and removed 5 min afterwards. Thiram, TMT, Zn-pyrithione (Sigma, St. Louis, MO, USA), 8HQ, clioquinol, and GTSM-Cu (Medchem Express, Monmouth Junction, NJ, USA) were added 30 min prior to hyperthermia and removed 24 h after. Elesclomol was used in combination with copper(I) chloride (Merck) at an equimolar ratio unless stated otherwise. In cell viability experiments involving mono-exposure to copper, copper(I) chloride was added 5 min before hyperthermia and left until the end of the experiment. Antimycin-A (Selleck) and FCCP (Abcam, Cambridge, UK) were added 1 h prior to hyperthermia and left until the end of the experiment. DMNQ (Medchem Express) and paraquat dichloride (Merck) were added 5 min prior to hyperthermia and left until the end of the experiment. BPTES, etomoxir, and UK5099 (all from Selleck) were added 4–6 h prior to hyperthermia and removed after 24 h.
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4

Evaluating Dichloroacetate and Gemcitabine

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All tested compounds were dissolved in DMSO just before the experiment, and a calculated amount of drug solution was added to the cell growth medium to a final solvent concentration of 0.5%, which had no detectable effects on cell viability. Dichloroacetate (DCA), 2,2-dichloroacetophenone (DAP) and gemcitabine hydrochloride were purchased by Merck KGaA (Darmstadt, Germany).
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5

Comprehensive Pharmacological Toolkit

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The following drugs were obtained from Cayman Chemical (Ann Arbor, MI, USA): cisplatin (cis-Diamminedichloroplatinum), cyclophosphamide (hydrate), epothilone B, etoposide, 5-fluorouracil, lovastatin (lovastatin hydroxy acid, sodium salt), rapamycin, and tamoxifen. Compounds obtained from Millipore Sigma included: doxorubicin hydrochloride, gemcitabine hydrochloride, and methotrexate.
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6

Chemotherapeutic and Anticancer Compound Acquisition

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The following drugs were obtained from Cayman Chemical (Ann Arbor, MI, USA): cisplatin (cis Diammineplatinum hydrochloride), cyclophosphamide (hydrate), epothilone B, etoposide, 5-uorouracil, lovastatin (lovastatin hydroxy acid, sodium salt), rapamycin, and tamoxifen. Compounds obtained from Millipore Sigma included: doxorubicin hydrochloride, gemcitabine hydrochloride, and methotrexate.
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7

Cytotoxic Agents for Cancer Treatment

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Gemcitabine hydrochloride (GEM), Cymarin (CYM), irinotecan hydrochloride (CPT-11), and pemetrexed disodium heptahydrate (PMX) were purchased from Sigma-Aldrich.
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8

Preparation and Administration of 2Br-DAB and Gemcitabine

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1,2-Diamino-4,5-dibromobenzene (2Br-DAB) was obtained from Lu’s laboratory and administered at 7 mg/kg bodyweight [19 (link),20 (link)]. Because of the precipitation of 2Br-DAB in hydrophilic liquids, a stock solution was prepared by resuspending 2Br-DAB in 100% ethanol at a final concentration of 10 mg/mL. Prior to intraperitoneal injection, the 2Br-DAB stock solution was further diluted to a final ethanol concentration of 10%. gemcitabine hydrochloride (Sigma, Taufkirchen, Germany) was resuspended in sterile normal saline at 10 mg/mL. For all in vivo experiments, the final gemcitabine concentration was set to 100 mg/kg bodyweight. As the vehicle control, 10% ethanol dissolved in sterile saline was taken.
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9

Synthesis and Evaluation of Test Compounds

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Compounds reported here were synthesized using previously reported procedures with some modifications (Kuo et al., 2008 (link)). Test compounds and gemcitabine hydrochloride (GEM; Sigma-Aldrich, St. Louis, MO) were dissolved in dimethyl sulfoxide (DMSO; Sigma-Aldrich) at 50 μM concentration.
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10

Comprehensive Immunoblot Analysis

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The antibodies to CA9, p-RelA, RelA, p-IKKβ, IKKβ, p-IκBα, IκBα, LDH, HIF1α, SQSTM1, cleaved-caspase-3, cleaved-PARP1, NRF2, and actin were obtained from Cell Signaling Technology. The antibodies to GPX4 and CA9 were obtained from Abcam. The antibodies to LC3, MLKL, RIPK3, OPRL1, OPRM1, and HMGB1 were obtained from NOVUS. Desferrioxamine, β-mercaptoethanol, N-acetyl-l-cysteine, N-Acetyl-l-alaine, hydrogen peroxide solution, gemcitabine hydrochloride, sulfasalazine, cobalt chloride, cycloheximide, tocopherol, necrosulfonamide, hydroxychloroquine sulfate, EDTA, cytochalasin B, cytochalasin D, paclitaxel, crystal violet, protease inhibitor cocktail, Z-VAD-FMK, TNF, staurosporine, cycloheximide, and lipopolysaccharides were obtained from Sigma-Aldrich. Erastin, ferrostatin-1, lapatinib, JTC801, and compound libraries were obtained from Selleck Chemicals. BANORL24, SB612111, UFP101, and Trap101 were obtained from Tocris Bioscience.
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