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Chemstation software

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ChemStation software is a data analysis and instrument control software designed for Agilent Technologies' analytical instruments. It provides a user-friendly interface for the acquisition, processing, and management of chromatographic data.

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454 protocols using chemstation software

1

Fatty Acid Profiling of Extracted Oils

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The fatty acids profile of extracted oil samples was determined by the method Ce 1f–96 given in AOCS [21 ]. The oil sample (50 μL) was methyated in the presence of 4 mL KOH (1 M) at room temperature for 1 h in order to convert fatty acids into their respective methyl esters. The resultant fatty acid methyl esters (FAMEs) were extracted with GC grade n–hexane and analyzed by Gas Chromatograph apparatus equipped with an auto sampler, flame–ionization detector (FID) and supelco wax column. The samples (1 μL) were injected with Helium (1 mL/min) as a carrier gas onto the column, which was programmed for operating conditions such as column oven temperature 160 °C at 0 min with subsequent increase of 3 °C/min until 180 °C. The column oven temperature was increased from 180 °C to 220 °C at 1 °C/min and was held for 7.5 min at 220 °C. Split ratio was 50% with injector 240 °C and detector 250 °C temperatures. The peak areas and total fatty acids composition were calculated for each sample by retention time using Varian Chem Station software. The standards of fatty acids methyl esters purchased from Sigma-Aldrich were also run under the same conditions for comparison with experimental samples.
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2

Fatty Acid Methyl Esters Analysis

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Fatty acid methyl esters (FAME) of samples were prepared according to the described method (Liu, 1994). Helium gas was used as a carrier, and FAME sample of 1.0 μl with gas was injected on the column at 1 ml/min rate. The column equilibrium conditions were 160°C for 0 min, and the temperature was increased to 180°C at a rate of 3°C/min with injection. The column temperature was further increased from 180°C to 220°C at 1°C/min and maintained for 7.5 min. The split ratio was 50% keeping injector and detector temperature of 240°C and 250°C, respectively. Quantitative analysis of fatty acids and composition were performed from peak area and retention time using Varian Chem Station software.
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3

Triacylglycerol Composition Analysis by GC

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The triacylglycerol composition of experimental samples was determined by the method Ce 1f–96 given in AOCS [14 ]. The oil sample (50 μL) was methyated in the presence of 4 mL KOH (1 M) at room temperature for 1 h in order to convert fatty acids into their respective methyl esters. The resultant fatty acid methyl esters (FAMEs) were extracted with GC grade n–hexane and analyzed by Gas Chromatograph (Varian 3900) apparatus equipped with an auto sampler, flame–ionization detector (FID) and supelco wax column (30 m × 0.25 μm film coating). The samples (1 μL) were injected with Helium (1 mL/min) as a carrier gas onto the column, which was programmed for operating conditions such as column oven temperature 160 °C @ 0 min with subsequent increase of 3 °C/min until 180 °C. The column oven temperature was increased from 180 °C to 220 °C @ 1 °C/min and was held for 7.5 min at 220 °C. Split ratio was 50 % with injector 240 °C and detector 250 °C temperatures. The peak areas and triglycerides composition were calculated for each sample by retention time using Varian Chem Station software. The standards of triglyceride methyl esters purchased from Sigma-Aldrich were also run under the same conditions for comparison with experimental samples.
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4

HPLC Analysis of Advanced Glycation Endproducts

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Each HPLC run was performed in triplicate using a Hewlett Packard 1050 system (Waldbronn, Germany) that included a low-pressure gradient pump, a four-channel degasser, a sequential auto sampler and a programmable fluorescence detector (HP 1046A). The HPLC equipment was operated with the ChemStation software from Agilent Technologies (Santa Clara, CA, USA). All AGE species were separated on a Shodex (New York, NY, USA) RSpak C18 reverse phase HPLC column (5 μm×4.6 mm×150 mm) with a 415 Å pore size. Mobile phase A consisted of 0.1% trifluoroacetic acid (TFA) and 1% acetonitrile in water. Mobile phase B included 0.1% TFA and 95% acetonitrile in water. A linear gradient from 20% to 60% of mobile phase B was applied at a constant flow rate of 1.0 mL/min over 25 minutes. Fluorescence measurements for monitoring glycated products were performed at excitation and emission wavelengths of 340 nm and 420 nm, respectively. The above excitation and emission values allowed optimal detection of AGEs. Prior to analysis, all solvents were degassed and sonicated for 15 minutes and all samples were filtered by a 0.22 μm membrane.
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5

UHPLC Band Broadening Measurements

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All band-broadening measurements were performed on an Agilent 1290 UHPLC system (Agilent Technologies, Waldbronn, Germany) equipped with a quaternary pump, autosampler and diode array detector with a flow cell of 1 shortest possible length (Thermo Scientific, Germering, Germany) was used to connect the column to the system. Chemstation software (Agilent Technologies) was used to control the UHPLC system and for data acquisition and processing. The measurements were performed at room temperature, and an injection volume of 1 µL was used. The flow rates ranged between 0.02 and 2 mL/min for the core-shell column, and between 0.02 and 2.5 mL/min for the fully porous column. The absorbance was measured at a wavelength of 210 nm.
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6

Quantification of Vitamin C by HPLC-MS

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Vitamin C was quantified as the sum of ascorbic (AA) and dehydroascorbic acids extracted through ultrasound-assisted extraction, as described by [1 (link)]. Briefly, 0.5 g of each sample was homogenized in an aqueous solution with 8% acetic acid and 3 mL of 3% H3PO4 and sonicated using an Elmasonic E15H (Elma, Singen, Germany) bath for 30 min. Afterwards, the obtained solution was centrifuged for 10 min at 400× g in an Eppendorf 5804 centrifuge (Eppendorf, Germany, Hamburg). The supernatant was filtered and 20 µL was injected into the HPLC-DAD-ESI-MS system equipped with a quaternary pump, autosampler, DAD detector, and coupled to an MS-detector single-quadrupole Agilent 6110 (Agilent-Technologies). An XDB C18 Eclipse column (4.5 × 150 mm) with a flow rate of 0.5 mL/min was used for separation and identification of the compounds, with 1% formic acid:acetonitrile (95:5) in distilled water (v/v) (A) and 1% formic acid in acetonitrile (B) as binary gradients. For MS fragmentation, a scanning range of 100–600 m/z in the ESI (+) mode was conducted with a capillary voltage of 3000 V, a temperature of 300 °C, and a nitrogen flow rate of 7 L/min. Chromatograms were recorded at a wavelength of 240 nm, and data acquisition was done using Agilent ChemStation software (Rev B.04.02 SP1, Palo Alto, CA, USA). The analysis was conducted in triplicate.
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7

HPLC-MS/MS Quantification of Pharmaceutical Compounds

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Bruker Esquire HCT mass spectrometer (Bruker Technologies, Bremen, Germany) equipped with a 1200 Series liquid chromatograph (Agilent Technologies, Waldbronn, Germany) and controlled by ChemStation software (Version B.01.03 [204], Agilent Technologies, Waldbronn, Germany) was used.
Chromatographic separation was achieved on a 150 mm × 2.1 mm, 5 μm particle, Agilent Zorbax SB-C18 column at 30°C. A gradient elution programme was conducted for chromatographic separation with mobile phase A (0.1% formic acid in water) and mobile phase B (acetonitrile) as follows: 0–4.0 min (10-80% B), 4.0–8.0 min (80-80% B), 8.0–9.0 min (80-10% B), and 9.0–13.0 min (10-10% B). The flow rate was 0.4 mL/min.
The quantification was performed by the peak area method. The determination of target ions was performed in selective ion monitoring mode (m/z 240 for bupropion, m/z 268 for metoprolol, m/z 326 for midazolam, m/z 180 for phenacetin, m/z 198 for omeprazole, m/z 271 for tolbutamide, and m/z 237 for IS) and positive ion electrospray ionization interface. Drying gas flow was set to 7 L/min and temperature to 350°C. Nebuliser pressure and capillary voltage of the system were adjusted to 25 psi and 3,500V, respectively.
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8

Metabolomics Data Acquisition Protocol

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The remaining two freeze-dried exudate pellets were resuspended in 1 mL of LC-MS grade water and transferred into new 2.5 mL microcentrifuge tubes. At this point, equal aliquots (5 μL) from all samples were combined in a new tube, per each sample type (leachates, and hydroponics), to be used as quality control (QC) sample, followed by addition of 100 μL of internal standard (0.2 mg mL−1 of succinic-d4 acid, and glycine-d5) to all samples before being lyophilised overnight using a speed vacuum concentrator (Concentrator 5301, Eppendorf, Cambridge, UK). All dried extracts were derivatized by oximation followed by a silylation step, using methoxyamine-hydrochloride in pyridine and N-Methyl-N-(trimethylsilyl) trifluoroacetamide, respectively. Metabolomics data were acquired using a 7890 B GC coupled to a 5975 series MSD quadrupole mass spectrometer, equipped with a 7693 auto-sampler and piloted by Chemstation software (Agilent, Technologies, UK).
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9

SCFA Analysis by HSS-GC-FID

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SCFA analysis was performed using Headspace sampler-gas chromatography-Flame ionization detector (HSS-GC-FID) analysis. To provide a brief overview, all SCFAs were extracted from 0.1 g of mice fecal samples in 1 mL of distilled H2O. These samples were vortexed and then centrifuged at 13,000 rpm for 3 min at room temperature. The resulting supernatant was transferred to a vial containing a GC buffer solution, and 2-ethylbutyric acid was added as an internal standard23 (link). The samples were analyzed using an Agilent 7890B GC system equipped with a 7697A headspace sampler and FID (Agilent Technologies, USA). Data acquisition and processing were performed using ChemStation software from Agilent Technologies.
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10

Curcumin Release Kinetics from Membranes

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The release of the curcumin from the membranes was determined as early described with some modifications [73 (link)]. Briefly, square pieces of membranes (ca. 2 cm2) were weighed and placed into individual amber vials. Considering the very low solubility of the curcumin in aqueous solutions, the release kinetic was performed at 37 °C in PBS/EtOH (90:10 v/v). At predetermined time intervals (every hour for 6 h, then at 12, 24, 48 and 72 h), supernatants were withdrawn, and the same amount of fresh solution was added back to the release medium. The curcumin concentration was measured using HPLC-UV with a linear elution gradient consisting of mobile phase A (0.1% acetic acid), B (Acetonitrile), and C (Methanol). The detection wavelength was set at 420 nm and Curcumin quantitation was based on a standard curve in PBS/EtOH (90:10 v/v). System control and data acquisition were performed using ChemStation software (Agilent Technologies). The results were presented in terms of cumulative release (percentage with respect to the loaded drug) as a function of time.
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