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20 protocols using horse serum

1

Glioblastoma and Pancreatic Cancer Cell Lines

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The human glioblastoma cell lines M059K and U-87 MG and the human pancreatic adenocarcinoma cell line MIA PaCa-2 were purchased from the American Type Culture Collection (ATCC, Rockville, MD, USA) and cultivated at 37 °C under a 5 % CO2 atmosphere in Dulbecco’s modified Eagle’s medium (DMEM, Invitrogen, Taastrup, Denmark) supplemented with 10 % fetal bovine serum (FBS, Biochrom AG, Berlin, Germany). MIA PaCa-2 cells were additionally cultivated in the presence of 2.5 % horse serum (Biochrom AG). Cells were treated with D11 (DTP, NIH/NCI, Rockville, MD, USA), IGF-1 (Calbiochem, Nottingham, UK) and TNFα (R&D Systems, Abingdon, UK) as indicated in the figure legends. Cell transfection was carried out with Lipofectamine 3000 reagent (Life Technologies, Naerum, Denmark) according to the manufacturer’s guidelines and a plasmid carrying the coding region for farnesylated AKT devoid of the PH domain prepared according to [28 (link)]. The correct sequence and orientation were verified by DNA sequencing. Neocarzinostatin (NCS) was kindly provided by Dr. Hiroshi Maeda, Kumamoto University, Japan.
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2

Isolation and Differentiation of Murine Bone Marrow-Derived Macrophages

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Bone marrow was isolated from femur and tibia of BALB/c mice. 2×106 cells were plated in petri dishes and differentiated for 12 days in IMDM (PAA, Cölbe, Germany) supplemented with 10% FCS, 2 mM L-glutamine, 5% horse serum (Biochrom, Berlin, Germany) and L929 fibroblast medium as a source of M-CSF. Medium was exchanged every 3 days. bmMΦ were harvested after 12 days and washed twice with PBS prior to use.
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3

Dose-dependent EZH2 inhibition in AtT-20 cells

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The murine pituitary adrenocorticotropin (ACTH) secreting AtT-20 cell line (ATTC®-CCL-89™, LGC-Standards GmbH, Wesel, Germany) was cultured as recommended by ATCC using F-12K Medium (ATCC® 30-2004™, Manassas, USA), supplemented with Fetal Bovine Serum (5%, Biochrom, Berlin, Germany) and Horse Serum (15%, Biochrom) at 37 oC and 5% CO2 atmosphere. Cells were treated with the highly selective EZH2 inhibitor GSK126 (Cayman Chemical Company, Ann Arbor, USA) dissolved in DMSO (Sigma-Aldrich, Steinheim, Germany) in a dose and time dependent manner, ranging from 10 nM to 100 μM and 24 to 72 hours.
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4

Isolation and Culture of Rat DRG Neurons

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DRGs were removed from rats and the neurons isolated, as described previously.20 (link) A 50-μl amount of cell suspension was placed in the centre of each cell culture dish (35 mm, Falcon “Easy Grip”). Neurons were incubated for at least 2 h to allow for cell adhesion. A 1-ml amount of F12 medium containing 10% horse serum (Biochrom AG, Germany) was added to each dish and the neurons were placed in the incubator at 37℃ and 5% CO2 until use in the patch-clamp experiments the next day.
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5

Culturing and Transfecting PC12 Cells

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PC12 cells (a gift from Rolf Heumann, Bochum, Germany; similar to clone 251 (Heumann et al., 1983 (link))) were cultured in DMEM with high (4.5 g/l) glucose (PAN biotech) supplemented with 10% horse serum (Biochrom), 5% fetal calf serum (Biochrom) and 100 U/ml penicillin/100 ng/ml streptomycin (PAN biotech). During the course of the project, characteristic features of the cell line — such as morphology, expression of neuronal proteins, and their responsiveness to NGF — were regularly confirmed. Cells were maintained at 37°C and 5% CO2 in a sterile incubator and tested negative for mycoplasmic infections (GATC Biotech, Konstanz, Germany).
Cells were transfected with the Neon Transfection System (Thermo Fisher Scientific, Waltham, MA, USA). The tip (100 µl) was loaded with 10 µg plasmid DNA of each construct. Cells were transfected by applying a pulse at 1410 V and 30 ms pulse width. Cells were plated onto poly-L-lysine (PLL) (Sigma, Cat. No: P-1524) coated coverslips (25 mm diameter, Menzel Gläser, Braunschweig, Germany)) and maintained for at least 48 hr before imaging.
For membrane sheet generation, cells were subjected to a brief ultrasound pulse in ice-cold sonication buffer (120 mM KGlu, 20 mM KAc, 20 mM HEPES-KOH, 10 mM EGTA; pH 7.2).
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6

Culturing HEK293T and Murine MSCs

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HEK293T cells were used for testing the functionality of the different vectors described below. Cells were cultured under normal oxygen conditions in a 5% CO2 humidified incubator at 37°C. Growth medium consisted of Dulbecco's modified eagle medium (DMEM, Gibco, Invitrogen, Carlsbad, CA, USA), 10% fetal bovine serum (FBS; Lonza BioWhittaker, Basel, Switzerland) and 1% Penicillin/Streptomycin (Gibco).
Murine MSCs from C57Bl/6 mice were obtained from the lab of Prof. dr. D Prockop, Tulane University, USA [21] (link). Cells were cultured in a 5% CO2 humidified incubator under normoxic conditions at 37°C in growth medium containing Iscove's Modified Dulbecco's Medium (IMDM, Gibco), 10% FBS, 10% horse serum (Biochrom, Berlin, Germany), 1% L-glutamine (Gibco) and 1% Penicillin/Streptomycin.
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7

Immunohistochemical Analysis of Myogenin Expression

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The sections were first treated with citrate buffer (0.1 M citric acid, 0.1 M sodium citrate), then blocked for 20 min with 3% H2O2 followed by a 30 min incubation step with horse serum (Biochrom GmbH, Berlin, Germany). Myogenin mouse-monoclonal antibody (MyBioSource/Biozol MBS438443) was incubated overnight at 4 °C. The sections were first labeled with a biotinylated linker, followed by streptavidin-conjugated horseradish peroxidase, and finally counterstained with hematoxylin.
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8

ALK Pathway in Neurite Outgrowth

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PC12 cells (2 × 106) were cotransfected with 0.5 μg of pEGFP-N1 vector (Clontech) together with one or more of the following constructs: 0.5 μg of pcDNA3-HsALK, 1.0 μg of pcDNA3 empty vector, 1.0 μg of pcDNA3 vector containing zebrafish alkal1, alkal2a, alkal2b, ltk, ltkmne, or human HsALKALs. Cells were transfected using an Amaxa Nucleofector electroporator (Amaxa GmbH) with Ingenio electroporation solution (Mirus Bio LCC) and transferred to RPMI 1640 medium (HyClone, GE Healthcare Bio-Sciences Austria GmbH) supplemented with 7% horse serum (Biochrom AG) and 3% FBS (Sigma-Aldrich Chemie GmbH). Approximately 5% of cells were seeded into 12-well plates for neurite outgrowth assays. The remaining cells were seeded in six-well plates for immunoblotting assays. The ALK inhibitor lorlatinib was used at a final concentration of 30 nM to inhibit the activity of Ltkmne (40 (link)). Two days after transfection, the percentage of GFP-positive and neurite-carrying cells versus GFP-positive cells was analyzed under a Zeiss Axiovert 40 CFL microscope. Cells with neurites longer than twice the length of the cell body were considered neurite carrying. Experiments were performed in triplicate, and each sample within an experiment was assayed in duplicate.
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9

Cell Culture and Transfection Protocols

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The cell line Oli-neu was cultured in modified Sato media [28 (link)]. Cell culture dishes were coated with poly-L-lysine (Sigma). HEK293T cells were cultured in DMEM (Sigma) with 10% Horse serum (Biochrom) and 1% Sodium-pyruvate (Sigma). Transfection of HEK293T cells with the NG2del constructs was effected by a standard protocol using the GenePulserXcell (Bio-Rad). Transcription was increased by including 4 mM sodium butyrate for the protease assay.
Cerebella of postnatal day 8–9 homozygous NG2-EYFP(NG2-KO) mice [29 (link)] or C57BL/6N mice (as control) were dissociated in 1% trypsin, 0.05% DNase in HBSS using a fire-polished Pasteur pipette to obtain a single-cell suspension, followed by seeding on poly-L-lysine-coated dishes. The cells were cultured in B27 medium containing DMEM, pyruvate, triiodo-L-thyronine, L-thyroxine (Sigma), B27 supplement (Gibco), 10ng/ml PDGF, 5ng/ml FGF (PrepoTech) and 1% HS. The medium was changed on the following day and renewed every 3–4 d. After 10-14d (after morphological assessment) cultures were stressed with H2O2 in B27 medium without growth factors.
Glioblastoma cells (R10) were cultured on ECM (Sigma) gel-coated dishes. ECM Gel was diluted 1/10 with Neurobasal media. Growth medium was Neurobasal medium (Invitrogen) with N2 supplement, B27 supplement, L-glutamine, EGF, FGF and 1% [v/v] penicillin/streptomycin (Serva).
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10

Cultivating Diverse Breast Cancer Cell Lines

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MCF-10A cells (Cat.No. CRL-10317, ATCC) were cultured in DMEM/Ham’s F12 medium containing l-glutamine (Cat.No. FG 4815, Biochrom) supplemented with 5% horse serum (Cat.No. 12449C, SAFC), 20 ng/ml human epidermal growth factor (Cat.No. E9644, Sigma-Aldrich), 10 μg/ml insulin (Cat. No.I9278, Sigma-Aldrich), 100 ng/ml cholera toxin (Cat.No. C8052, Sigma-Aldrich), 500 ng/ml hydrocortisone (Cat.No. H0888, Sigma-Aldrich) and 100 U/ml penicillin/streptomycin (Cat.No. A 2213, Biochrom).
MDA-MB-231 and MDA-MB-436 cells were cultured in DMEM containing 4.5 g/l glucose, l-glutamine (Cat.No. FG 0435, Biochrom) supplemented with 10% fetal bovine serum (Cat.No. S 0615, Biochrom) and 100 U/ml penicillin/streptomycin.
All cell lines were incubated at 37 °C in a 95% air and 5% CO2 atmosphere. The culture medium was changed every 2 to 3 days and cells were passaged every 4 to 5 days. To detach the cells, a PBS solution containing 0.025%(w/v) trypsin and 0.011%(w/v) EDTA (Cat.No. L 2113, Biochrom) was applied for several minutes.
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