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8 protocols using anti rabbit egfr

1

Immunochemical Analysis of Neural Cell Markers

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Immunochemical analysis was carried out as previously described (Yang et al. 2016 (link)). Anti-mouse O4 IgM (50%, v/v) were produced by hybridoma culture. Anti-mouse Olig2 (1:1000; Oasis Biofarm), anti-mouse GFAP (1:1000; Oasis Biofarm), and anti-rabbit neurofilament (NF-1) (1:1000) were purchased from Merck (Darmstadt, Germany). Anti-rat MBP (1:500), anti-rabbit EGFR (1:200) and anti-mouse CC1 (1:500) was obtained from Abcam (Boston, USA). Anti-mouse Nestin (1:1000) and the Alexa-488 or Alexa-594 conjugated secondary antibodies were purchased from Invitrogen (Frederick, USA). The nucleic acid dye 4′,6-diamidino-2-phenylindole (DAPI) was obtained from Roche (Basel, Switzerland).
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2

Immunofluorescence Microscopy of Cell Markers

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Immunofluorescence microscopy was performed to determine the TNFI, TCFI and PCC as previously described69 (link),70 (link). PCC values were determined by the strength of the relationship between two fluorochrome signals. Primary antibodies were: anti-rabbit-LSD1 (05–939; Merck Millipore), anti-goat-SNAI1 (sc-10433; Santa Cruz), anti-mouse-E-cadherin (sc-21791; Santa Cruz), anti-mouse-vimentin (sc-6260; Santa Cruz), anti-rabbit-PKC-θ-T538p (ab63365; Abcam), anti-rabbit-LSD1-s111p (ABE1462; Merck Millipore), anti-rabbit-ALDH1A1 (ab52492; Abcam), anti-rabbit-EGFR (ab2430; Abcam), anti-mouse-CSV (H00007431-M08; Abnova), anti-goat-ABCB5 (ab77549; Abcam), anti-rabbit-FAP-α (ab28244; Abcam), anti-goat CCL2 (sc-1304; Santa Cruz), anti-goat-F4/80 (sc-26642; Santa Cruz), anti-goat-CCR7 (NB100–712; Novus Biologicals), anti-mouse-CD38 (102761; Biolegend), anti-mouse-CD206 (ab8918; Abcam), and anti-goat-EGR2 (sc-204050; Santa Cruz). Secondary antibodies used: anti-rabbit-Alexa Fluor 488 (A21206; Life Technologies) or anti-rabbit-Alexa Fluor 568 (A10042; Life Technologies), anti-mouse-Alexa Fluor 568 (A10042; Life Technologies), or anti-goat-Alexa Fluor 633 (A21082; Life Technologies).
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3

Western Blotting for Protein Expression

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Western blotting was carried out as previously described (Yang et al., 2009 (link)). Briefly, cells were lysed in sample buffer plus a cocktail of protease inhibitors (Roche). For each sample, 20 μg of protein was used for electrophoresis in SDS-PAGE gel. Primary antibodies were used as follows; anti-rabbit PDGFRα (1:1000, Santa Cruz), anti- rabbit EGFR (1:200, Abcam), anti- rabbit Olig2 (1:1000, Millipore), anti-rabbit Nestin (1:5000, Covance) and anti-mouse MBP (1:1000, Abcam). Horseradish peroxidase (HRP)-conjugated secondary antibody (Promaga) was used at 1:2500. Chemiluminescent signals were detected by autoradiography using the ECL System (Amersham, Piscataway, NJ, USA).
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4

Immunocytochemical Analysis of Oligodendrocyte Differentiation

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Immunocytochemical analysis was carried out as previously described (Cheng et al., 2017 (link)). Antibodies used include anti-mouse A2B5 IgM, anti-BrdU IgM, O4 IgM (1:1 dilution in DPBS + 10% goat serum), anti-mouse Olig2 (1:1000, Millipore), anti-mouse MBP (1:500, Abcam), anti- rabbit EGFR (1:200, Abcam), anti-mouse GFAP (1:300, Chemicon), anti-rabbit Nestin (1:2000, Covance), and anti-rabbit neurofilament (1:100, Sigma). The Alexa-488 or Alexa-594 conjugated secondary antibodies were obtained from Molecular Probes (Thermo fisher). The nucleic acid dye 4′,6-diamidino-2-phenylindole (DAPI) was obtained from Roche.
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5

Antibody Characterization for EGFR Signaling

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The primary antibodies used for immunoblot analysis and immunohistochemical staining were rabbit anti-EGFR, mouse anti-vinculin, mouse anti-Tom23, goat anti-Tim23, rabbit anti-Mfn1, mouse anti-Drp1 (all above from Santa Cruz Biotechnology, CA, USA), mouse anti-MTCO1 (Abcam, Cambridge, UK), rabbit anti-phospho-EGFR (Tyr1068), rabbit anti- phospho-Drp1 (Ser637) (all above from Cell Signaling Technology, Inc., MA, USA), mouse anti-OPA1 (BD Biosciences, NJ, USA) and mouse anti-myc, mouse anti-Flag, mouse anti-β actin antibody (all above from Sigma-Aldrich, Inc., MO, USA). The primary antibodies used for immnofluorescence staining were rabbit anti-EGFR (Abcam, Cambridge, UK) antibody.
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6

Immunofluorescence Staining of Neural Markers

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Cells were plated on coverslips for 24 h incubation, and were fixed in 4% PFA for 30 min at room temperature. Samples were incubated with primary antibodies overnight at 4°C, followed by Alexa Fluor® 488-conjugated or Alexa Fluor® 594-conjugated second antibodies (1:500, Jackson Immunoresearch Laboratories, West Grove, PA, United States) for 2 h at room temperature. The primary antibodies used for incubation are as follows: rabbit anti-Sox2 (1:400, Abcam), goat anti-GFAP (1:400, Abcam), rabbit anti-Doublecortin (DCX) (1:400, Abcam), rabbit anti-EGFR (1:400, Abcam), rabbit anti-Map2 (1:800, Sigma-Aldrich), rabbit anti-Oligodendrocyte Marker O4 (1:100, Sigma-Aldrich). The stained sections were imaged by a fluorescence microscope (Eclipse Ti, Nikon).
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7

Western Blot Analysis of Protein Expression

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Tissue or cell samples were lysed in RIPA lysis buffer (Applygen, Beijing, China) containing phenylmethylsulfonyl fluoride (PMSF, Beyotime, Shanghai, China). Equal amounts of protein, which were determined by a BCA Protein Assay Kit (Thermo Pierce, Waltham, USA), were separated via 12% Bis-Tris NUPAGE gradient gels with MOPS running buffer and then transferred onto polyvinylidene difluoride (PVDF) membranes (Thermo Fisher, Waltham, USA). After blocking with 5% skim milk in Tris-buffered saline (TBS) for 1 h, the membranes were blotted with primary antibodies on a shaker overnight at 4 °C. Primary antibodies were as follows: mouse anti-Rac1 (1:1000, Thermo), rabbit anti-α-SMA (1:1000, CST), rabbit anti-EGFR (1:1000, Abcam), rabbit anti-EGFR (phosphor Y1068) (1:1000, Abcam), and rabbit anti-GAPDH (1:1000, CST). The membranes were washed three times using TBS with 0.05% Tween-20 for 10 min each, followed by incubation with corresponding secondary horseradish peroxidase (HRP)-conjugated antibodies (1:5000, Lianke Technology) for 1 h at room temperature. Blots were developed using an enhanced chemiluminescence kit (Biological Industries) and visualized via X-ray films. The levels of protein expression were quantified by ImageJ software.
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8

Quantitative Analysis of EGFR Expression

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Total RNA samples were isolated and reverse transcribed into complementary DNA, and quantitative PCR was then performed according to the manufacturer's instructions. The data obtained from each sample were normalized to the expression level of glyceraldehyde 3‐phosphate dehydrogenase (GAPDH). The primers used were as follows: human EGFR: forward, 5′‐ TTTGTGTTCCCGGACATAGT‐3′, reverse, 5′‐TTTGTGTTCCCGGACATAGT‐3′; GAPDH: forward, 5′‐GGGAAACTGTGGCGTGAT‐3′, reverse, 5′‐GAGTGGGTGTCGCTGTTGA‐3′. All PCR was performed in triplicate and no‐template groups were built. The 2‐[(Ct of EGFR)—(Ct of GADPH)] method was used to calculate the relative expression of target genes. Western blotting and immunohistochemical staining were performed to detect EGFR, according to the manufacturer's instructions. Rabbit anti‐EGFR (1:1000, Abcam, Cambridge, MA, USA) was the primary antibody used.
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