The largest database of trusted experimental protocols

3 protocols using hpa001593

1

Immunocytochemistry and Knockdown of RPGR

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies used in this study and their dilutions for immunocytochemistry are as follows: rabbit polyclonal anti-RPGR (Sigma #HPA001593; 1:100 dilution), mouse monoclonal anti-acetylated tubulin (Proteintech group #66200-1-Ig; 1:2500), mouse monoclonal anti-γ-tubulin (Sigma #T6557; 1:2500), rabbit polyclonal anti-γ-tubulin (Sigma #T3559; 1:2500), mouse monoclonal anti-FLAG (Sigma #F1804; 1:2000), rabbit polyclonal anti-ARL13B (Proteintech group #17711; 1:2000), rabbit monoclonal anti-GFP (Invitrogen #G10362; 1:500), rabbit polyclonal anti-PDE6D (MyBiosources #MBS7005086; 1:1000 for immunoblotting), mouse monoclonal anti-β-actin (Sigma #A1978; 1:10,000 for immunoblotting). Small interfering RNAs (siRNAs) for control (ON-TARGETplus non-targeting siRNA) and human RPGR (ON-TARGETplus SMARTpool) were obtained from GE Dharmacon.
+ Open protocol
+ Expand
2

Antibodies for Centrosome Protein Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used for localization studies and Western blot: ALMS1 (1:1500–2000, rb, ab84892 Abcam; 1:500, rb, NB100-97823, Novusbio), ARL13B (1:200, ms, 73-287, Neuromab; rb, 17711-1-AP, Proteintech); TUBGCP2 (1:100, rb, 25856-1-AP, Proteintech), CEP70 (1:500, rb, ab227456, Abcam), acetylated tubulin (1:250, ms, ab24610, Abcam), CEP250 (1:200, rb, 14498-1-AP, Proteintech), Centrin-3 (1:500, rb, PA5-35865, Thermo), Centriolin (1:200, ms, sc-365521, Santa Cruz), RPGR (1:500, rb, HPA001593, Sigma Aldrich). Secondary Antibodies were Alexa488 goat anti-mouse (A11029, Molecular probes) and anti-rabbit (A11034, Molecular Probes), Alexa568 goat anti-mouse (A11031, Molecular probes) and anti-rabbit (A11036, Molecular Probes). For Western blot FLAGM2-HRP (Sigma) was used.
+ Open protocol
+ Expand
3

Western Blot Analysis of RPGR Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the western blot, protein (30 µg) was loaded into a NuPAGE 3–8% Tris-Acetate gel (Invitrogen, Waltham, MA, USA). Gels were transferred to a 0.45 µm nitrocellulose membrane for 1.5 h at 30 V in the NuPAGE transfer buffer at room temperature. Membranes were probed overnight at 4 °C with 1:500 anti-RPGR antibody (HPA001593; Sigma-Aldrich, St. Louis, MO, USA) with the following immunogen sequence, encoded by exons 10 to 12: 379EINDTCLSVATFLPYSSLTSGNVLQRTLSARMRRRERERSPDSFSMRRTLPPIEGTLGLSACFLPNSVFPRCSERNLQESVLSEQDLMQPEEPDYLLDEMTKEAEIDNSSTVESLGETTDILNMTHIMSLN509, and they were used in previous studies for western blot [24 (link),25 (link)]. This region is common across the RPGREx1–19 and RPGRORF15 protein isoforms. Normal human retinal protein was used as a positive control. Studies with the Sigma antibody were optimised alongside an RPGR antibody (16891-1-AP; Proteintech, Rosemont, IL, USA) provided for western blot analysis, as well as lysates from normal human retina and control human iPSCs. Vinculin (ab130007; Abcam, Cambridge, UK) was used as a loading control. The membrane was imaged using the Odyssey Fc system (LI-COR Biosciences, Lincoln, NE, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!