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52 protocols using α actinin

1

Immunofluorescence Analysis of Ang II-Induced Cytoskeletal Changes

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After the cells were treated with Ang II and transfected, they were fixed with 4% formaldehyde and permeabilized in 0.5% Triton X-100 for 20 min at room temperature. After washing with PBS, normal goat serum was added into cells for blocking for 30 min. A primary antibody (α-actinin; Abcam) was added to the cells, followed by incubation overnight at 4°C. On the next day, a secondary antibody (Goat Anti-Mouse IgG H&L (Alexa Fluor® 594; Abcam) was added to the cells, followed by incubation for 1 h. Immunofluorescence was detected using a fluorescence microscope (Olympus, Tokyo, Japan) after the cells were cultured with DAPI for 10 min. In total, 100 cells in 3 wells were randomly selected to quantify the surface area using Image-Pro Plus 6.0.
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2

Cytoskeletal Characterization of Cardiomyocytes

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After returning to the earth, the fixed cardiomyocytes were adopted for immunofluorescence staining against α-Actinin (Abcam, USA) and cTnT (Proteintech, China) to illustrate the cytoskeleton morphology, and the nuclei were stained with Hoechst 33342 (Molecular Probes, USA). The labeled cells were imaged by confocal microscopy (ZEISS, Germany). ImageJ software analyzed the sarcomere length by calculating the distance between intensity peaks. Five sarcomeres were measured along the long axis direction and then averaged to measure sarcomere length. A large number of sarcomeres (n > 10) were calculated to compare the sarcomere length.22 (link) The ImageJ and Matlab software were used for orientation analysis of the sarcomere structure and myofilament arrangement. A higher-order cytoskeleton presents a highly centralized orientation, and any cytoskeletal remodeling and depolymerization will lead to a random orientation. To quantify the level of cTnT, we acquired a minimum of five images to analyze fluorescent intensity. In addition, we measured the cell size of cardiomyocytes after Alexa Fluor 647-WGA staining (Thermo Fisher, USA) to assess whether cardiac atrophy occurred in tail-suspension mice. All antibodies are listed in Supplementary Table 2.
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3

Immunostaining of Pluripotent and Cardiac Markers

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The cells were plated on 20 mm coverslips and were fixed with 4% PFA for 20 minutes. Then, after washing with PBS three times for 10 minutes, the cells were successively treated with 0.2% Triton X‐100 (Sigma‐Aldrich) for 30 minutes, washed as above, and treated with 3% bovine serum albumin (BSA, Solarbio) at room temperature. Primary antibodies included OCT4 (1:100, Abcam), SSEA‐4 (1:100, Santa Cruz), NANOG (1:100, Abcam), TRA‐1‐60 (1:100, Santa Cruz), TNNT2 (1:100, Santa Cruz), α‐actinin (1:100, abcam), CX43 (1:100, Santa Cruz) and γ‐H2A.X (1:200, Abcam). Cells were washed and then incubated for 45 minutes at RT in the dark with 1:200 Alexa Fluor secondary antibodies (Life Technology). Cells were washed again as above, mounted with Fluoroshield Mounting Medium with DAPI (4, 6‐diamino‐2‐phenylindole), and imaged using a Confocal Microscope (Carl Zeiss, LSM 510 Meta).
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4

Immunohistochemical Analysis of Cardiac Inflammation

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Selected heart tissues were embedded in paraffin and used for immunohistochemical studies. For the assessments of inflammatory cell areas in damaged heart, heart sections (5 μm) were stained with haematoxylin‐eosin (HE). For the analysis of collagen volume fraction, heart sections(5 μm) were stained with Masson's trichrome. The sections were incubated with primary anti‐myeloperoxidase IL‐38 (Abcam, ab180898), (MPO; Abbiotec, UK) and CD68 (eBioscience) at 4°C overnight, followed by respective secondary antibodies for 1 hour at room temperature. The numbers of MPO+ neutrophils and mouse CD68+ macrophages were assessed by counting the total cell numbers in the infarcted and border areas in 10 randomly chosen fields in each section. The microscope (BX51, Olympus, Japan) was used to observe pathological change areas. Image‐Pro Plus6.703 software (Media Cybernetics) was used for calculation of fibrosis areas and the statistical analysis. To analyse IL‐38‐expressing cells in infarcted heart, the sections were stained with specific antibodies against CD68 (1:100, Santa Cruz Biotechnology, USA) and α‐actinin, (1:100, Abcam, UK) to identify macrophages and cardiomyocytes.
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5

Immunoblotting of Cell Signaling Proteins

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The following primary antibodies from Cell Signalling Technology (Danvers, MA, USA) were used: 4E‐BP1 (#9452), P‐4E‐BP1S65 (#9451), AKT (#9272), P‐AKTS473 (#9271), P‐AKTT308 (#9275), eIF4E (#2067), mTOR (#2972), P‐mTORS2448 (#2971), raptor (#2280), S6 (#2217), and S6S240/244 (#5364). The primary antibody for α‐actinin (#A7732) was purchased from Abcam (Cambridge, England). The primary antibody for EGFP (11814460001) was from Roche Applied Science (Penzberg, Germany). All Cell Signalling Technology antibodies as well as EGFP were diluted 1:1000; α‐actinin was diluted 1:5000. The secondary antibodies goat anti‐mouse (#115‐035‐003) and goat anti‐rabbit (#111‐035‐003) were purchased from Jackson ImmunoResearch Europe (Ely, Cambridgeshire, England) and were diluted 1:10 000. All antibodies were diluted in 4% bovine serum albumin in TBS‐T.
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6

Cytoskeletal Alterations in Cardiomyocytes Exposed to ETP

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To identify whether the treatment of ETP caused any alterations in cytoskeletal assembly of CMs, we performed immunofluorescence staining of cardiac-specific proteins. Cells from ETP-treated and control groups were fixed with ice-cold 99% Methanol at − 20 °C for 10 min followed by permeabilization and fixing of cells with 0.3% Triton X-100 for 20 min and with 5% Bovine Serum Albumin for 1 h at room temperature, respectively. Cells were then incubated with anti-sarcomeric alpha actinin (α-actinin) and anti-cardiac troponin T (cTnT) antibodies at 37 °C for 1 h. All the antibodies were purchased from Abcam (Abcam, Cambridge, UK) and diluted to working concentration of 1:200. After three washes with PBS+/+, primary antibodies were then detected using species-matched respective Alexa Fluor-488/568-conjugated secondary antibodies (Invitrogen, Darmstadt, Germany) with 1 h incubation at 37 °C. The cells were washed three times with PBS+/+ for 5 min and then mounted with Prolong® Gold anti-fade mount with DAPI (Invitrogen, Darmstadt, Germany). The images were acquired with an Axiovert 200 fluorescence microscope and Axiovision 4.3 software (Carl Zeiss).
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7

Differentiation of H9c2 and C2C12 Myoblasts

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Differentiation of H9c2 myoblasts in myotubes was induced by changing the culture medium from proliferation to differentiation medium at cell confluence. And the cells were maintained for at least 1 week in the differentiation medium contained DMEM supplemented with 2 mM l-glutamine, 100 IU/mL penicillin, 100 μg/mL streptomycin, 1% insulin–transferrin sodium selenite (Sigma, USA), and 1% FBS. The myoblast C2C12 cells were inoculated in 75 cm2 culture dish and cultured with high glucose DMEM containing 10% fetal bovine serum (FBS) at 37 °C and 5% CO2. When cells confluence reached 70–80%, the culture medium was replaced with high glucose DMEM containing 2% horse serum (HS) to induce C2C12 cell differentiation. Immunofluorescence staining of MyHC (sc-20641, 1:150, Santa Cruze), sarcomeric actin (α-Actinin, ab9465, Abcam) were used to evaluate traits of myotube26 (link).
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8

Cardiomyocyte Differentiation from hESCs

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HESCs-H9 were purchased from the Cellapy Biological Technology Company (Beijing, China). HESCs-H9 were cultured and differentiation into cardiomyocytes following procedures described previously (19 (link),20 (link)). Briefly, hESCs were cultured on six-well plates (Corning) with PSCeasy hESCs culture medium (Cellapy, Beijing, China). Cells were grown to reach 80–90% confluence prior to cardiomyocyte differentiation as described previously (21 (link)). The purity of human cardiomyocytes using a purification medium RPMI 1640 (no glucose) (Corning) was monitored by immunofluorescent staining with primary antibodies against TNNT2 (Santa Cruz, USA) and α-actinin (Abcam, USA).
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9

Quantification of Cellular Morphology Using IF

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IF staining was performed as described previously [16 (link)]. After 48 h of transfection, the cells were fixed with 4% formaldehyde and permeabilized in 0.5% Triton X-100 for 20 min at room temperature. The cells were then washed with PBS and blocked with normal goat serum for 30 min. Primary antibody (α-actinin: ab90421, 1:100; Abcam) was added to the cells, and the cells were incubated overnight at 4°C. The next day, the cells were incubated with a secondary antibody (Goat Anti-Mouse IgG H&L [Alexa Fluor® 594]: ab150116, 1:500; Abcam) at room temperature for 1 h. IF was detected using a fluorescence microscope (Olympus, Tokyo, Japan) after the cells were incubated with DAPI for 10 min. One hundred cells from three wells were randomly selected to quantify the surface area using Image-Pro Plus 6.0.
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10

Imaging Autophagy and Protein Localization

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Cells were plated on 15 mm laminin coated coverslips and treated as above, fixed, stained and imaged on a Ziess 710 confocal microscope. For autophagasome experiments cells were infected with GFP-LC3 virus 48 h before fixation. Cells were fixed with 4% PFA for 20 min, permeabilized for 20 min with 0.5% Triton X-100, stained with α-actinin (Abcam), mounted using DAPI hardset mounting media (Vector Laboratories) and imaged using a Zeiss 710 confocal microscope. For localization experiments the following antibodies were used at a concentration fo 1:100: HA, LC3II/I, mTOR, caveolin3, Appl, GOPC, Syntaxin6 (Cell Signaling), LAMP1 (Abgent), and VAMP4 (Novus biologicals). Image analysis was carried out using ImageJ software.
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