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6 protocols using mouse monoclonal anti polyhistidine antibody

1

Protein Characterization by SDS-PAGE and Western Blot

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Proteins
were analyzed by SDS–PAGE in 12% gels under fully denaturing
conditions (boiling of the samples for 10 min prior to loading) or
semi-denaturing conditions (no boiling of the samples prior to loading).
In-gel fluorescence was analyzed on a UVP ChemiDoc-It2 Imaging System
equipped with a cooled CCD camera and a GFP filter, after exposure
for about 3 s, following SDS–PAGE analysis under semi-denaturing
conditions. For Western blot analysis, proteins were transferred to
polyvinylidene fluoride membranes (Merck) for 45 min at 12 V on a
semi-dry blotter (Thermo Fisher Scientific). Membranes were blocked
with 5% (w/v) non-fat dried milk in Tris-buffered saline containing
0.1% (v/v) Tween-20 (TBST) overnight at 4 °C. After three washes
with TBST, they were incubated with the appropriate antibody dilution
in TBST containing 0.5% (w/v) non-fat dried milk at room temperature
for 1 h. Specifically, the utilized antibodies were a mouse monoclonal
anti-polyhistidine antibody (Sigma) at 1:3000 dilution (conjugated
with horseradish peroxidase), a mouse monoclonal anti-GFP antibody
(Takara) at 1:20,000 dilution, or a mouse monoclonal anti-FLAG antibody
(Sigma) at 1:2500 dilution, with a horseradish peroxidase-conjugated
goat anti-mouse IgG secondary antibody at 1:4000 dilution. The proteins
were visualized using a ChemiDoc-It2 Imaging System (UVP), after triple
membrane washing with TBST.
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2

Western Blot Protein Separation and Detection

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ES products (100 ug/mL) were separated on 12 % reducing SDS PAGE gels alongside a molecular weight marker (Broad Range ladder, NEB, UK) prior to transfer onto activated Immobilon-P membrane polyvinylidene fluoride (PVDF) membranes, 0.45 μm (Sigma Aldrich, UK) by wet Western transfer method. Membranes were blocked for 1 h in Western blocking buffer (4% skimmed milk powder [Marvel] in PBS) at room temperature and then washed three times for 15 min each in PBS Tween (PBST, 0.05 % Tween). Membranes were cut into strips and incubated individually with cattle or sheep serum at 1:200 dilution in Western blocking buffer overnight at 4 °C. Membranes were washed as described and probed with conjugate antibodies used for ELISA at a 1:5000 dilution in Western blocking buffer for 2 h at room temperature. Membrane strips were then washed again as previously, and antibody visualised using SIGMAFAST™ 3,3′-Diaminobenzidene (DAB) tablets (Sigma Aldrich).
For the rCL1 Western blots a mouse monoclonal anti-poly-Histidine antibody (Sigma Aldrich) at a 1:500 dilution was used as the conjugate, followed by an horse raddish peroxidase (HRP) goat anti-mouse IgG (Sigma Aldrich) at 1:5000 dilution and 3,3′,5,5′-Tetramethylbenzidine (TMB) as the substrate (Sigma Aldrich).
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3

Western Blotting of Polyhistidine-Tagged Proteins

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Proteins were loaded on 12% polyacrylamide gel, with color Prestained Protein Standard (NEB). After migration, proteins were stained with Instant Blue (Abcam). For Western blotting, proteins were transferred onto a nitrocellulose membrane (Amersham Protran, Cytiva) using a Power Blotter apparatus (Invitrogen). Membranes were then saturated in PBS containing 0.1% Tween 20 (PBST) and 4 % skim milk overnight. They were incubated for 2 h with PBST containing a 1:2000 dilution of mouse monoclonal anti-polyHistidine antibody (Sigma-Aldrich) or alternatively with mouse monoclonal anti-MBP antibody (NEB), and then with PBST containing a 1:1000 dilution of Goat anti-mouse IgG Peroxydase conjugated (Invitrogen) for 1 h. Immunodetected proteins were revealed with Pierce ECL Western Blotting Substrate (Thermo), following the manufacturer’s instructions, and chemiluminescence was detected with a ChemiDoc XRS+ system (Bio-Rad).
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4

Western Blot Analysis of H. pylori Proteins

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H. pylori cells were harvested by centrifugation at 4200 g for 5 min. H. pylori proteins were separated on SDS PAGE and stained with Coomassie Brilliant Blue R250 or were used for immunoblot analysis. Proteins were transferred at 4°C to a nitrocellulose membrane (GE Healthcare) using a Transblot apparatus (Bio-Rad). Following transfer, membranes were blocked in Odyssey Blocking Buffer (Li-Cor Biosciences) for one hour. The membranes were incubated with primary antibody (diluted 1:1000) for one hour or overnight, washed four times for 5 minutes each at room temperature in PBS + 0.1% Tween-20, and subsequently incubated for one hour at room temperature with the fluorescently-labeled secondary antibody (diluted 1:1000 in Odyssey Blocking Buffer). Mouse monoclonal anti-polyhistidine antibody (Sigma-Aldrich), rabbit polyclonal anti-UreB antibody (Abcam), and mouse monoclonal anti-H. pylori CagA antibody (Abnova) were used as primary antibodies. IRDye 800CW conjugated goat polyclonal anti-rabbit and anti-Mouse IgG were used as secondary antibodies (Li-Cor Biosciences). The membranes were washed four times for 5 minutes each at room temperature in PBS + 0.1% Tween-20 with gentle shaking protected from light. The membrane was scanned using the Odyssey Infrared Imaging system following manufacturer’s instructions.
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5

Antibodies for Amyloid Oligomer Detection

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The following antibodies were obtained from commercial sources: Rabbit polyclonal anti-Oligomer A11 (Thermo Fisher Scientific, Cat#AHB0052, RRID: AB_2536236), Rabbit polyclonal anti-Amyloid fibrils OC (Millipore Sigma, Cat#AB2286, RRID: AB_1977024), Goat anti-Rabbit HRP linked secondary antibody (Cell Signaling Technology, Cat# 7074, RRID: AB_2099233), Mouse monoclonal Anti-poly Histidine antibody (Sigma-Aldrich, Cat# H1029, RRID: AB_260015), and Horse anti-Mouse-IgG HRP linked (Cell Signaling Technology, Cat# 7076, RRID: AB_330924).
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6

Western Blot Protein Detection

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Following 10% SDS-PAGE analysis, protein bands were transferred from the SDS-PAGE gel to a nitrocellulose membrane in a Mini trans-Blot Ò Cell (Bio-Rad) at 100 V for 1 h. The membrane was blocked for 1 h with 5% non-fat dried milk in TBS-T buffer (50 mM Tris-HCl, 150 mM NaCl, 0.05% Tween 20 at pH 8), washed with TBS-T and incubated overnight with mouse monoclonal anti-polyHistidine antibody (Sigma-Aldrich) diluted 1:3000 in the blocking solution. Following incubation the membrane was washed with TBS-T and incubated with goat anti-mouse IgG peroxidase (HRP) antibody (Sigma-Aldrich) diluted 1:5000 in the blocking solution. Protein detection was made by chemiluminescence using WesternBright ECL spray (Grisp) and X-ray films were developed with a Curix 60 film processor (AGFA HealthCare).
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