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Prolong gold antifade with 4 6 diamidino 2 phenylindole dapi

Manufactured by Thermo Fisher Scientific
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ProLong Gold Antifade with 4',6-diamidino-2-phenylindole (DAPI) is a reagent used for fluorescence microscopy. It contains a glycerol-based mounting medium and the nuclear counterstain DAPI, which binds to DNA and emits blue fluorescence when excited.

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28 protocols using prolong gold antifade with 4 6 diamidino 2 phenylindole dapi

1

Immunofluorescence Assay for Rab27a

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Cells plated on gelatin-coated glass slides (Nunc Lab-Tek II Chamber Slide System) were allowed to attach overnight. Cells were fixed for 20 minutes in 4% Paraformaldehyde (PFA) (Electron Microscopy Sciences, Hatfield, PA, USA), then incubated in blocking solution consisting of 2% normal donkey serum, 1% BSA, 0.1% Triton X-100, 0.05% Tween 20, 0.05% sodium azide in 1× PBS (w/o Ca2+/Mg2+), pH 7.2 for 30 minutes, followed by 30-minute blocking in Protein Block, Serum-free (Dako, Carpinteria, CA, USA) + 0.1% Triton X-100. Sheep anti-Rab27a (Thermo Fisher) or an equivalent concentration of sheep IgG (Thermo Fisher) was diluted 1:40 in donkey serum blocking solution for 1 hour at room temperature, followed by Alexa Fluor 488-conjugated donkey anti-sheep IgG (Thermo Fisher). Cells were mounted in ProLong Gold Antifade with 4′,6-diamidino-2-phenylindole (DAPI) (Thermo Fisher) and visualized on an inverted Nikon A1R fluorescent microscope. Identical imaging parameters (objective, light intensity, gain, exposure) were used between slides and samples.
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2

Muscle Histology and Immunofluorescence Imaging

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TA muscles from each mouse line were cryopreserved in melting isopentane for 30 s and 10 µm transverse cryosections were obtained (Leica CM3050 S). For histology, sections were stained with H&E and imaged on a Leica DM5500 B microscope equipped with a Leica HC PLAN APO 20× objective. Centrally nucleated fibers (CNFs) were counted using the Cell Counter plugin on ImageJ software (NIH) and expressed as a percentage of the total number of myofibers (%CNFs). For immunofluorescence, sections were fixed in 4% paraformaldehyde in PBS at RT for 10 min and subsequently washed three times in PBS before being permeabilized in 0.1% Triton X-100 in PBS for 10 min at RT. Sections were then blocked in 5% bovine serum albumin (BSA) and 0.1% Triton X-100 in PBS for 1 h at RT before incubating with primary antibodies overnight at 4 °C. Slides were then washed three times in PBS before incubating with Alexa Fluor secondary antibodies (1:500 each) for 1 h at RT. Sections were finally wash three times in PBS and mounted in ProLong Gold Antifade with 4′,6-diamidino-2-phenylindole (DAPI) to visualize nuclei (ThermoFisher Scientific). Images were acquired on a Deltavision PersonalDV deconvolution microscope equipped with an Olympus UApo 20x objective.
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3

Immunofluorescence Assay of B. bovis

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Non-induced and induced B. bovis cultures were collected at 0, 12, 24, and 48 h and used for IFA. Cells were washed with 1X PBS at 900xg and pellets suspended with 1X PBS containing 3% bovine serum albumin (BSA). A smear was made by taking 5 μl from each cell preparation to a glass microscope slide. The slides were air dried, fixed for 5 min in cold acetone, and blocked with 1X PBS containing 10% BSA for 30 min. Then, slides were incubated with rabbit anti-CCp5 or -FNPA sera (1:50) in 1X PBS-10% BSA for 1 h. The slides were washed 3 times with 1X PBS and incubated in 10% BSA with goat anti-rabbit IgG AlexaFluor®555 (Thermo Fisher, Waltham, MA, USA), and then again washed 3 times with 1X PBS and mounted with a drop of Prolong™ Gold Anti-fade with 4′,6-diamidino-2-phenylindole (DAPI) (Thermo Fisher, Waltham, MA, USA) and cover slip. The slides were analyzed using a Leica Sp8-X White Light Laser point scanning confocal microscope (Leica Microsystems, Wetzlar, Germany).
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4

Quantitative Quadriceps Muscle Analysis

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Quadriceps muscles from each mouse line were cryopreserved in melting isopentane for 30 s and 7-µm transverse cryosections were obtained (Leica CM3050 S). For immunofluorescence, sections were fixed in acetone at -20°C for 15 min and subsequently washed three times in PBS before being blocked in 5% goat serum for 30 mins at RT. Sections were incubated for >1 h in primary antibody (rat monoclonal anti-Laminin 1:500; Sigma, L06631) at RT. Slides were then washed three times in PBS before incubation with Alexa Fluor 488 goat anti-rat IgG (1:1000; ThermoFisher, A-11006) secondary for 30 mins at RT. Sections were finally washed three times in PBS and mounted in ProLong Gold Antifade with 4′,6- diamidino-2-phenylindole (DAPI) to visualize nuclei (ThermoFisher Scientific). Images were acquired on a Leica DM5500 B microscope equipped with a Leica HC PLAN APO 10× objective and stitched together with LASX software (Leica) to allow visualization of the entire quadriceps. SMASH—semi-automatic muscle analysis using segmentation of histology software—was used to analyze and quantify centrally located nuclei, fiber number, and fiber size (Smith and Barton, 2014 ).
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5

Immunostaining of Drosophila Wing Discs

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Larval wing imaginal discs were dissected in phosphate-buffered saline (PBS) and fixed with 4% paraformaldehyde in PBS for 30 min at room temperature, followed by washes with PBT (PBS, 0.1% Triton X-100). For pupal wing dissections, pupae were collected at the appropriate number of hours after puparium formation (APF) and fixed with an opened case overnight at 4 °C with 4% paraformaldehyde in PBS. After dissection, an additional fixation for 30 min at room temperature was performed. Tissues were stained with the primary rabbit anti-pSMAD antibody (PS1) 1:500 (from Prof P. ten Dijke, University of Leiden) overnight at 4 °C followed by anti-rabbit Alexa 594 1:250/500 (Thermo Fisher Scientific) for 1 h at room temperature. Samples were mounted in ProLong Gold Antifade with 4’,6-diamidino-2-phenylindole (DAPI, Thermo Fisher Scientific). Images were taken using a Zeiss LSM880 microscope with a 20× and a 40× objective. Merged images of Z-stack focal planes were generated with ImageJ (NIH) showing maximum intensity.
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6

Immunostaining of Intestinal Markers

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Prolong Gold antifade with 4′,6-diamidino-2-phenylindole (DAPI) was obtained from Life Technologies (Grand Island, NY). FITC-tagged UEA-1 lectin was obtained from Sigma, St. Louis, MO (cat. L9006; 10 μg/mL). The following antibodies were used as primary antibodies: NKCC1 (cat. ab59791, 1:200; Abcam); CLCA1 (Developmental Studies Hybridoma Bank 10.1.1 monoclonal, 1:100); mucin 2 (cat. sc-7314; 1:100; Santa Cruz Biotechnology, Dallas, TX); claudin-1 (cat. 71-7800, 1:200; ThermoFisher, Waltham, MA); claudin-2 (cat. 35-5600, 1:200; ThermoFisher); and Bio-Plex Pro Mouse Cytokine kit (cat. M6000007NY; Bio-Rad, Hercules, CA).
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7

Acriflavine-Induced kDNA Loss in Trypanosomes

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WT/L262Pγ cells were treated with 10 nM acriflavine (Sigma) over 3 days; loss of kDNA was assessed by preparing microscope slides and mounting with a cover slip using 50 μl Prolong Gold Antifade with 4’, 6-diamidino-2-phenylindole (DAPI; Life Tech.). To confirm loss of maxicircle genes and of a representative minicircle (type A-like) [16 (link),80 (link)] by PCR, total DNA was extracted after expanding the cell culture for a further two days in the absence of acriflavine. The PCR assay was carried out exactly as described in Dean et al. (2013).
WT/L262Pγ kDNA0 clone #3 was generated without drug treatment; the cell line lost its kDNA spontaneously after 6 weeks of growth in HMI-9, 10% (v/v) FCS.
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8

Immunofluorescence Imaging of EphB4 Receptor

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Immunofluorescence was performed using the method reported in Rutkowski et al (2012) (28). Briefly, 1 × 105 cells were seeded onto cover slips and allowed to attach for 24 h before being fixed using 4% paraformaldehyde and permeabilised using 0.3% Triton X-100. Non-specific binding was blocked using 10% goat serum before addition of antibodies overnight at 4°C. After washing, bound primary antibody was detected using a secondary antibody conjugated to a fluorescent tag. In some experiments phalloidin conjugated to tetramethyl rhodamine isothiocyanate (TRITC) (Sigma, St. Louis, MO) was used to stain F-actin. Cover slips were mounted on glass slides using Prolong Gold Antifade with 4,6-diamidino-2-phenylindole DAPI (Life Technologies) and cells were visualised using a Leica SP5 spectral scanning confocal microscope. To identify EphB4 specific staining, control samples included one to which an irrelevant mouse IgG was added, another to which the secondary antibody alone was added and a third to which no antibody was added.
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9

Immunofluorescent Staining of F-actin and Nuclei

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NTM cells were fixed with 2% paraformaldehyde in PBS, washed with PBS, permeabilized using 0.5% Triton X-100, and blocked with Superblock (Thermo Scientific, Waltham, MA, USA). F-actin was stained with Phalloidin conjugated with Alexa-488 (1:100; Life Technologies, Eugene, OR, USA) for 1 hour at room temperature. After PBS washes, coverslips were mounted onto slides using ProLong Gold Anti-Fade with 4′,6-diamidino-2-phenylindole (DAPI; Life Technologies) for nuclear counterstaining.
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10

Immunofluorescence Staining of Cells

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The following reagents were used: Fluorescence tag-conjugated phalloidin and ProLong Gold Anti-fade with 4′,6-diamidino-2-phenylindole (DAPI; both from Life Technologies, Grand Island, NY, USA); optimum cutting temperature (OCT) compound (Sakura Finetek, Tissue-Tek, Torrance, CA, USA); bovine serum albumin (BSA), paraformaldehyde, and triton X-100 (Sigma (St. Louis, MO, USA); low glucose DME, L-glutamine, amphotericin B, and DMSO (to dissolve calcein AM; Mediatech, Washington, D.C., USA); penicillin/streptomycin (Norris Comprehensive Cancer Center Cell Culture Core, Los Angeles, CA, USA); and serum-free media comprising low glucose DME, streptomycin, penicillin, gentamicin and L-glutamine.
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