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Ammonium acetate nh4oac

Manufactured by Thermo Fisher Scientific
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Ammonium acetate (NH4OAc) is a white crystalline chemical compound that is widely used in various laboratory applications. It serves as a buffer solution, maintaining a specific pH level in chemical reactions and analyses. Ammonium acetate is also utilized as a mobile phase component in liquid chromatography techniques, such as high-performance liquid chromatography (HPLC) and mass spectrometry.

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6 protocols using ammonium acetate nh4oac

1

Metabolomics Sample Preparation Protocol

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Acetonitrile (ACN), methanol (MeOH), and ammonium acetate (NH4Oac), all LC–MS grade, were purchased from Fisher Scientific (Pittsburgh, PA). Ammonium hydroxide (NH4OH), O-methylhydroxylamine hydrochloride (MeOX), and N-Methyl-n-(tert-butyldimethylsilyl) trifluoroacetamide (MTBSTFA) were bought from Sigma-Aldrich (Saint Louis, MO). Deionized water was provided in-house by a water purification system from EMD Millipore (Billerica, MA). Phosphate buffered saline (PBS) was bought from GE Healthcare Life Sciences (Logan, UT). Standard compounds corresponding to measured aqueous metabolites/features were purchased from Sigma-Aldrich and Fisher Scientific. Lipid standards were purchased from Fisher Scientific, Sigma-Aldrich, and Avanti Polar Lipids (Alabaster, AL).
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2

Radioisotope Labeling Assay Protocol

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Potassium dihydrogen phosphate (KH2PO4), sodium dihydrogen phosphate (NaH2PO4), L-aspartic acid (catalog #A93100, batch #12002LC), L-glutamic acid (catalog #G1251, lot #SLBK8671V), magnesium chloride, and oligonucleotides were purchased from Sigma-Aldrich (St. Louis, MO, USA). The radiolabeled reagents aspartic acid, L-[2,3-3H] (catalog #ART 0211, lot #180606), glutamic acid, L-[2,3,4-3H] (catalog #ART 0132, lot #180710) and adenosine triphosphate (ATP) [γ-32P] were purchased from American Radiolabeled Chemicals (St. Louis, MO, USA). Ampicillin, chloramphenicol, kanamycin, 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), ethylenediaminetetraacetic acid (EDTA), isopropyl β-d-thiogalactopyranoside (IPTG), phenylmethanesulfonyl fluoride (PMSF), and tris(hydroxymethyl) aminomethane (Tris) were from GoldBio Biotechnology, Inc., (St. Louis, MO, USA). Potassium chloride (KCl), sodium chloride (NaCl), trichloroacetic acid (TCA), and ammonium acetate (NH4OAc) were purchased from Fisher Scientific (Hampton, NH, USA).
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3

Lipid Mediator Extraction and Quantification

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Optima grade methanol (MeOH), acetonitrile (ACN), isopropanol (ISP), and acetic acid (AcOH, > 98% pure) were purchased from Fisher Scientific (Pittsburg, PA, USA). UHPLC-grade methyl tert-butyl ether (MTBE) and hexane were also purchased from Fisher Scientific (Pittsburg, PA, USA). Methyl formate (> 98% pure) was purchased from Acros Organics (Morris Plains, NJ, USA). Ammonium acetate (NH4OAc) was purchased from Fisher Scientific (Fair Lawn, NJ, USA). Deionized water was obtained through filtration via a Millipore Q-Plus (Elix®35, Molsheim, France). For study 1, native SPM standards: resolvin D1 (RvD1), resolving D2 (RvD2), resolving D3 (RvD3), resolvin D5 (RvD5), resolving E1 (RvE1), maresin (MaR1), and protectin (PD1), and deuterated SPM standards: resolvins (RvD1-d5, RvD2-d5, RvD3-d5, RvE1-d4) maresin (MaR1-d5), and leukotriene B4-d4 were purchased from Cayman Chemicals (Ann Arbor, MI, USA). C18 SPE cartridges (SupelTM-Select HLB SPE 30 mg loading, 1 mL volume) were purchased from Supelco Analytical (Bellefonte, PA, USA). For study 2, lipid standards were purchased from Cayman Chemical (Ann Arbor, MI, USA), Santa cruz Biotechnology, Inc (Dallas, TX, USA) and Avanti polar Lipids, Inc (Alabaster, AL, USA), as summarized in Supplementary Materials: Table S1.
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4

Lipid Extraction and Analysis Protocol

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All GP chemical standards and the egg PC extract were purchased from Avanti Polar Lipids (Alabaster, Alabama). Optima LC-MS-grade acetonitrile (ACN), acetone, and methanol (MeOH) were acquired from Fisher Chemical (Suwanee, GA). Ultrapure 18.2 MΩ·cm deionized water (Barnstead Nanopure Diamond, Van Nuys, CA) was used to prepare all solutions. Ammonium acetate (NH4OAc) was purchased from Fisher Chemical (Suwanee, GA), lithium acetate (LiOAc), sodium acetate (NaOAc), and hydrogen peroxide were purchased from Sigma-Aldrich (Saint Louis, MO).
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5

HPLC Characterization of Biomolecules

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High performance liquid chromatography (HPLC) grade water, nuclease-free water, potassium chloride, and ammonium acetate (NH4OAc) were purchased from Fischer Scientific (NJ, USA). Trimethylammonium acetate (TMAA) was obtained by slowly adding 4.3 M acetic acid to 50 mL of 4.3 M trimethylamine (TCI chemical) solution until the pH was around 7.0, and this process was monitored by a pH meter (Mettler Toledo, OH). Acetic acid, fondaparinux sodium (C31H43N3Na10O49S8, m.w. 1728.1 g/mol) and chondroitin disaccharide Δdi-6S sodium salt (C14H19NO14SNa2, m.w. 503.34 g/mol) were purchased from Sigma-Aldrich (MO, USA). Insulin (human) and angiotensin 2 (human) were purchased from Alfa Aesar (MA, USA). Ubiquitin (~8.5 kDa) was purchased from Boston Biochem (MA, USA). Myoglobin (~17 kDa) was purchased from Sigma Aldrich (St. Louis, Mo, USA). All DNA oligonucleotides used in this work, d(CATATATG), d(ACGCGCGT), 56-mer ssDNA and human telomeric G-quadruplex sequence d(TT(GGGTTA)3GGGA) were purchased from Integrated DNA Technologies, Inc. (Coralville, IA, USA) All the chemical reagents and oligonucleotides were used without further purification.
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6

Metabolite Profiling with Isotopically Labeled Standards

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Formic acid (FA), acetonitrile (ACN), and ammonium acetate (NH4OAc) were obtained from Thermo Fisher, United States. Tryptophan-d5, valine-d8, carnitine C8:0-d3, carnitine C16:0-d3, cholic acid-d4, and stearic acid-d3 (98% purity) were purchased from Cambridge Isotope Laboratories (Tewksbury, MA, United States). Lysophosphatidylcholine LPC (19:0) was obtained from Avanti Polar Lipids (Alabaster, AL, United States). Pure water was purchased from Wahaha ((Hangzhou, China).
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