The largest database of trusted experimental protocols

11 protocols using microscint o

1

Ryanodine Receptor Binding Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Binding reactions were set up in a 96 well flat bottom microtiter plate in a total volume of 250 μl per well. Reactions consisted of either 25 μg of membrane prep, [3H] ryanodine (concentrations 0.01–40 nM) and 2 μl of DMSO in a binding buffer containing 0.01% Pluronic (1.5M KCl, 10 mM ATP, 1.38 mM CaCl2, 10 mM HEPES pH 7.4) or 25 μg of membrane prep, [3H] ryanodine (0.01–40 nM), 2 μl of ryanodine in DMSO (final concentration 10 μM) in 0.01% Pluronic. The reactions were incubated at room temperature for 2 h. The 96 samples were then loaded onto a 96 well filter plate pre-treated with 50 μl of 0.1% polyethylenimine, using a 96 well plate harvester (Brandel, MD, USA). Each filter with bound membranes was then washed 3 times with 250 μl of wash buffer (150 mM KCl, 10 mM HEPES pH 7.4 and left overnight at room temperature to dry. Each well on the plate was then filled with 50 μl MicroScint™-O (PerkinElmer, MA, USA) and the filter plate loaded into a TopCount NXT™ Micro-plate Scintillation counter (PerkinElmer, MA, USA). Specific binding and binding kinetics values (equilibrium dissociation constant Kd and Binding capacity/receptor density Bmax) were calculated using GraphPad Prism v5.5 (GraphPad, CA, USA).
+ Open protocol
+ Expand
2

Allogeneic Lymphocyte Proliferation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sorted blood DC subsets and monocytes were adjusted to 2.5 × 105 cells/ml in cRPMI and a three-fold dilution series of each population was prepared. Allogeneic PBMCs were added (5 × 105 cells/well) at responder to stimulator cell ratios ranging from 2:1 to 162:1. Pokeweed mitogen (Sigma, Poole, UK) and cRPMI were added to wells containing only PBMC as positive and negative controls, respectively. After 72 h incubation at 37 °C in a humidified 5% CO2 atmosphere, cells were pulsed with 1 μCi/well 3H-thymidine (GE Healthcare, Little Chalfont, UK) and incubated for a further 24 h. Cells were harvested onto filter mats using a Harvester 96 Mach III (TomTec Inc, Hamden, USA) and 3H-thymidine incorporation measured by addition of 25 μl/well Microscint O and counting on a MicroBeta2 (link) Plate Counter (both Perkin Elmer, High Wycombe, UK).
+ Open protocol
+ Expand
3

Detailed Pharmacological Reagents Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Foetal calf serum (FCS) was obtained from PAA Laboratories (Wokingham, UK). Furimazine was purchased from Promega (Southampton, UK). Bicinchoninic acid protein assay kit and white 96-well microplates were obtained from Thermo Fisher Scientific (Waltham, MA, USA). GF/B filter plates and Microscint-O were from PerkinElmer (Groningen, The Netherlands). CA200645 was obtained from HelloBio (Bristol, UK). The synthesis of AV039 was described in Vernall et al. as compound 19 [34 (link)], while the synthesis of XAC-S-ser-S-tyr-X-BY630 (compound 27) and XAC-S-ser-S-tyr-X-BYFL (compound 28) was described in Vernall et al. 2013 [33 (link)]. PSB-11 and MRS1220 were purchased from Tocris Bioscience (Bristol, UK), and NECA was obtained from Sigma-Aldrich (Zwijndrecht, The Netherlands). [3H]8-Ethyl-4-methyl-2-phenyl-(8R)-4,5,7,8-tetrahydro-1H-imidazo[2,1-i]-purin-5-one ([3H]PSB-11) was kindly donated by Prof. C.E. Müller (University of Bonn, Germany) and its synthesis described in Müller et al. [35 (link)]. 1-Benzyl-8-methoxy-1H,3H-pyrido[2,1-f]purine-2,4-dione (compound 5) synthesis was described in Priego et al. as compound number 3 [36 (link)] and referred in Xia et al. [37 (link)] as compound number 5, while LUF7565 synthesis was described in Xia et al. as compound 27 [30 (link)]. All other chemicals and reagents were obtained from Sigma-Aldrich (Gillingham, UK).
+ Open protocol
+ Expand
4

Radioligand Binding Assay for CX3CL1 and CCL5

Check if the same lab product or an alternative is used in the 5 most similar protocols
Increasing concentrations of nanobodies or unlabeled CX3CL1 or CCL5 were added to 100 pM 125I-CX3CL1 or 200 pM 125I-CCL5 in HEPES binding buffer (50 mM HEPES-HCl, pH 7.4; 1 mM CaCl2; 5 mM MgCl2; 0.1 M NaCl; 0.5% (w/v) bovine serum albumin). Radioligand alone and radioligand + 100 nM of unlabeled CX3CL1 or CCL5 were used as controls for total binding and non-specific binding. A total of 3 µg of HEK293T, HEK293T-iUS28 or HEK293T cells transfected with the US28 receptor were added to the ligands and incubated for 2 h at room temperature. Membranes were harvested on 0.5%(w/v) PEI-soaked GF/C filter plates (Perkin-Elmer, Waltham, MA, USA) and dried for 30 min at 60 °C. In addition, 100 pM of 125I-CX3CL1 or 200 pM 125I-CCL5 was spotted on the GF/C filter plate to determine radioligand concentration. Scintillation fluid MicroScint-O (Perkin-Elmer) was added to the GF/C filter plate and radioactive decay was measured using a Microbeta liquid scintillation counter (Perkin-Elmer). Data were analyzed using GraphPad Prism version 8.0.
+ Open protocol
+ Expand
5

Radioligand Binding Assay for PYY Receptor Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
First, 2 μL
of the test compound was incubated in a 96-well plate with 100 μL
of the membrane diluted with the assay buffer (50 mM Tris, 5 mM MgCl2, 150 mM NaCl, 0.03% NaN3, pH 7.4) to 0.5 μg
protein/mL and 100 μL of 400 pM 125I-PYY (NEX341;
PerkinElmer, Waltham, MA). After incubation at room temperature for
60 min, the reaction mixture was filtered through a UniFilter-96 GF/C
(PerkinElmer) presoaked in a polyethylenimine (PEI) solution (20 mM
Tris, 0.3% PEI, pH 7.4). The filter was washed three times with the
ice-cold filtration buffer (50 mM Tris, 5 mM MgCl2, 150
mM NaCl, 0.03% NaN3, 0.05% 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate,
pH 7.4). The UniFilter-96 GF/C was then dried; 15 μL of the
liquid scintillator MicroScint O (PerkinElmer) was then added to each
well, and the radioactivity was measured using TopCount (PerkinElmer).
The data obtained were analyzed using Prism (GraphPad Software, La
Jolla, CA) to calculate the IC50 value.
+ Open protocol
+ Expand
6

PBMC Proliferation Assay with Kv1.3 Inhibitors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Assays were performed in RPMI-1640 medium containing 2 mM L-glutamine, 0.5 units/mL penicillin, 0.1 mg/mL streptomycin (Sigma-Aldrich, Darmstadt, Germany) and 10% human serum (Bloodbank, Rigshospitalet, Denmark).
25,000 PBMCs were seeded per well in 96-well round bottom plates in different concentrations of Kv1.3 inhibitors, stimulated or non-stimulated with anti-CD3/CD28 beads (Cat# 11132D; Thermo Fisher) and incubated for 72 hours. 3H-thymidine (6.7 Ci; Perkin Elmer, Skovlunde, Denmark) was added 24 hours before cells were harvested onto glass fiber filter plates (Uni-Filter-96 GF/C; Perkin Elmer) using FilterMate cell harvester (Unifilter-96; Perkin Elmer). Filter plates were dried over night at room temperature, and scintillation fluid was added (MicroScint-O; Perkin Elmer), then 3H-thymidine incorporation was measured as counts per minute (CPM) in a scintillation counter (TopCount NXT; Parkard, Meriden, CT, USA).
+ Open protocol
+ Expand
7

Binding Assay for H1 Receptor Ligands

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco’s Modified
Eagle’s
Medium was acquired from Sigma Aldrich (St. Louis, MO, USA). Medium
was supplemented with fetal bovine serum and penicillin/streptomycin
from GE healthcare (Uppsala, Sweden). Linear polyethylenimine (25
kDa) was acquired from Polysciences (Warrington, PA, USA). HBSS, trypsin,
and the BCA protein assay were bought from Thermo Fischer Scientific
(Waltham, MA, USA). The Branson sonifier 250 homogenizer was bought
from Emerson (St. Louis, MO, USA). GF/C plates, Microscint-O, [3H]mepyramine,
the cell harvester, and the Wallac Microbeta counter were all bought
from Perkin Elmer (Waltham, MA, USA). Diphenhydramine hydrochloride
was purchased from Sigma Aldrich. Mepyramine maleate was obtained
from Research Biochemicals International. Triprolidine hydrochloride
was purchased from Tocris. Azatadine dimaleate and desloratadine were
purchased from HaiHang Industry Co., Ltd. Cyclizine hydrochloride
was purchased from Toronto Research Chemicals (TRC). Stock solutions
of H1R binding compounds were made at 10 mM in DMSO and
were further diluted to a final concentration of ≤1% DMSO in
binding experiments.
+ Open protocol
+ Expand
8

Thymidine Incorporation Assay for Myeloma Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
A 3H-thymidine incorporation assay was performed on MOPC315.BM cells, that is, mouse myeloma cells [24 (link)]. The cells were suspended in RPMI 1640 (Lonza, Verviers, Belgium) supplemented with 10% fetal bovine serum (Sigma-Aldrich, Diegem, Belgium) and 1% Penicillin/Streptomycin (Sigma-Aldrich), plated in 96-well plates (5 × 104/100 μL/well) and cultured for 24 hours at 37°C and 5% CO2 in the presence of different AndoSan concentrations. For the last 16 hours of culture, 0.17 μCi of [Methyl-3H] thymidine (Perkin Elmer, Zaventem, Belgium) was added to each well. DNA was harvested on Multiscreen Harvest Plates (Millipore, Carrightwohill, Cork, Ireland) using Filter Mate Harvester (Perkin Elmer). Plates were dried for 3-4 hours before adding 25 μL/well of Microscint O (Perkin Elmer) followed by radioactivity measurement (c.p.m.) with TopCount NXT Microplate Scintillation Counter (Perkin Elmer).
+ Open protocol
+ Expand
9

MDSC Suppression of T-Cell Proliferation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Spleens were harvested from C57BL/KaLwRij mice and cell suspensions were obtained as described above. Splenocytes (1×105/well) were cultured in 96-well plates using complete RPMI 1640 medium containing 5 μM of 2-mercaptoethanol (Gibco by Life Technologies, Gent, Belgium). MDSC subsets were added (final culture volume 200 μl/well) at different MDSC:splenocyte ratios (1:8; 1:4; 1:2; 1:1) and T-cell proliferation was induced by adding 1 μl/well of mouse T-activator CD3/CD28 dynabeads (Gibco). Proliferation was assessed after 72 hours of culture by adding 0.33 μCi of [methyl-3H] thymidin (Perkin Elmer, Waltham, USA) to each well for the last 18 hours of culture. DNA was harvested on Multiscreen Harvest Plates (Millipore, Carrigtwohill, Ireland) using Filter Mate Harvester (Perkin Elmer). Plates were dried for 3-4 hours before adding 25 μl/well of Microscint-O (Perkin Elmer) and measuring radioactivity (c.p.m.) with a TopCount NXT Microplate Scintillation counter (Perkin Elmer). Suppression was calculated as follows: Suppression (%) = [1 − (Proliferation with MDSCs/ proliferation without MDSCs)] x 100.
+ Open protocol
+ Expand
10

Thymidine Incorporation Assay for Ba/F3 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ba/F3 cells were washed three times with DMEM to remove IL-3 from medium. Cells were seeded in a 96-well plate (20 000 cells per well in 200 μl) with or without interleukin-3 or PDGF-BB in quadruplicates, and incubated overnight at 37 • C. After 20 h, 20 μl (0.02 Ci) of [methyl-3 H]-thymidine (Perkin Elmer #NET027X005MC) were added in each well and incubated at 37 • C for 4 h. Cells were harvested in GF/C glass fiber filter-bottom 96well microplates (Perkin Elmer #6005174) and dried at 55 • C for 30 min. Scintillation liquid (40 μl, MicroScint-O, PerkinElmer) was added to each well and the incorporated tritium was measured using a TopCount instrument (Perkin Elmer).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!