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Sodium cacodylate

Manufactured by Polysciences
Sourced in Germany

Sodium cacodylate is a chemical compound used as a buffer in various laboratory applications. It is a crystalline solid that is soluble in water and acts as a source of cacodylate ions. Sodium cacodylate is commonly used to maintain the pH of biological samples, solutions, and fixatives in microscopy and other laboratory procedures.

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5 protocols using sodium cacodylate

1

Transmission Electron Microscopy of Caco-2 Cells

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Caco-2 cells were seeded at 7.5 × 104 cells/cm2 on transwell inserts of 24 well plates (polyester membrane, pore size 0.4 µm; Corning Life Sciences, Amsterdam, Netherlands) and cultured until the cells formed a confluent monolayer and further 7, 14 or 21 days. For transmission electron microscopical analysis, the cells were treated according to the protocol of Bye et al. [32 (link)]. They were washed once with 0.1 M sodium cacodylate (pH 7.4) and fixed with a solution containing osmium tetroxide and glutaraldehyde as fixatives (0.5% osmium tetroxide (Polysciences Europe GmbH, Eppelheim, Germany), 2.5% glutaraldehyde, 10 mM potassium hexacyanoferrate(II) (both from Sigma-Aldrich/Fluka, Taufkirchen, Germany), 0.05 M sodium cacodylate (Carl Roth, Karlsruhe, Germany)). After fixation the cells were washed once again with sodium cacodylate, dehydrated over a serial dilution with ethanol and embedded in epoxy resin. Ultrathin sections were stained with uranyl acetate and lead citrate, and examined with a Zeiss EM910 electron microscope; images were taken at 2,500× and 12,500× magnification.
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2

Ultrastructural Analysis of Cortical Neurons

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For transmission electron microscopy (TEM) study, cortical neurons were plated on Aclar embedding film (Electron Microscopy Sciences). At 10 DIV, cells were fixed with fixative buffer (2.5% glutaraldehyde in 0.1 M sodium cacodylate, pH 7.4) for 1 h at 4 °C. After washing with washing buffer (0.1 M sodium cacodylate (Sigma), 4% sucrose, 0.05% CaCl2) for 5 min, cells were post-fixed with 1% OsO4 (Electron Microscopy Sciences) in 0.1 M sodium cacodylate for 1 h at 4 °C, washed with cold ddH2O, for 5 min three times, and incubated in 1% uranyl acid (Polysciences) for 1 h at 4 °C. The samples were then dehydrated with graded ethanol solutions at RT for 7 min for each step: 50% once, 70% once, 90% once and 100% three times. Then, cells were filtrated with a series of solutions as follows: (1) EtOH:Spurr's Resin (Low Viscosity Embedding Media Spurr's, Kit Electron Microscopy Sciences, Hatfield, PA)=1:1 for 30 min; (2) EtOH:Spurr's Resin=1:2 for 40 min; (3) pure Spurr's Resin for 1 h. Cells were then polymerized at 70 °C for 20 h. Ultrathin sections were sectioned with a diamond knife (DiATOME) and stained with 4% uranyl acid for 5 min followed by lead citrate stain for 8 min. After washing with ddH2O, cells were examined by TEM (Tecnai G2 Spirit TWIN, FEI Company) with a Gatan CCD Camera (794.10.BP2 MultiScanTM) and acquisition software DigitalMicrograph (Gatan).
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3

Fixation and Dehydration for SEM

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For observation, SNM were fixed in a solution containing 3% glutaraldehyde (Sigma: G7651), 1 M sodium cacodylate (Polysciences) and 0.1 M sucrose (Sigma). After 2 days, the substrates were washed with distilled water. Dehydration was achieved by placing these scaffolds in an increasing concentration of ethanol (50–100%). Dehydrated samples were then mounted on aluminum stubs, sputter-coated with gold–palladium, and examined with scanning electron microscopy (SEM) (Ultra 55, Carl Zeiss).
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4

Platelet-Leukocyte Morphology and Adhesion Analysis

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The platelet–leukocyte morphology and interaction with the
surfaces was investigated using SEM imaging. The unadhered cells were
removed by aspirating the plasma from the surfaces followed by gently
rinsing (2×) with PBS. The surfaces were then transferred to
a glass Petri dish and the platelets and leukocytes that adhered were
fixed by incubation in a solution of primary fixative (6% glutaraldehyde
(Sigma), 0.1 M sodium cacodylate (Polysciences), and 0.1 M sucrose
(Sigma)) for 45 min. The surfaces were then transferred to a secondary
fixative (primary fixative without glutaraldehyde) for 10 min. The
surfaces were then placed in consecutive solutions of ethanol (35%,
50%, 70%, and 100%) for 10 min each. For further dehydration, surfaces
were placed into a solution of hexamethyldisilazane (HMDS, Sigma)
for 10 min. The surfaces were then air-dried and stored in a desiccator
until further imaging by SEM. Prior to imaging, the substrates were
coated with a 10 nm layer of gold and imaged at 7 kV.
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5

Platelet Activation Analysis via SEM

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Platelet activation was determined using scanning electron microscopy (SEM). After blood collection, centrifugation and 2 hrs of incubation in PRP, surfaces were fixed with a primary fixative (6% gluteraldehyde (Sigma), 0.1M sodium cacodylate (Polysciences), and 0.1M sucrose (Sigma)) for 45 mins. The surfaces were then transferred to a secondary fixative (primary fixative without gluteraldehyde) for 10 mins. This was followed by exposing the surfaces to consecutive solutions of ethanol (35%, 50%, 70% and 100%) for 10 mins each. The surfaces were then air-dried and stored in a desiccator until imaging by SEM. Prior to imaging, the surfaces were coated with a 10 nm layer of gold and imaged at 5kV. Total time from blood collection to fixation was approximately 2.5 hrs.
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