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4 protocols using isolute c18 ec cartridges

1

PNGase F Glycan Modification Protocol

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PNGase F was obtained from New England Biolabs (Ipswich, MA, USA). Borane-ammonia complex, sodium hydroxide beads, acetic acid, and iodomethane were acquired from Sigma-Aldrich (St. Louis, MO, USA). Dimethyl sulfoxide (DMSO) was bought from Mallinckrodt Chemicals (Phillipsburg, NJ, USA). HPLC grade acetonitrile, water, and isopropanol were purchased from Fisher Scientific (Fair Lawn, NJ, USA). Isolute® C18 (EC) cartridges were purchased from Biotage (Charlotte, NC, USA), and microspin columns were purchased from Harvard Apparatus (Holliston, MA, USA).
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2

Glycoprotein Analysis in Cerebrospinal Fluid

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Iodomethane, sodium hydroxide beads, acetic acid, and ammonium borane complex were purchased from Sigma Aldrich (St. Louis, MO, USA). Isolute® C18 (EC) cartridges were purchased from Biotage (Charlotte, NC, USA) and 10k Amicon Ultra-0.5 mL Centrifugal Filters were purchased from Millipore Sigma (Burlington, MA, USA). Microspin columns were purchased from Harvard Apparatus (Hollison, MA, USA). N-glycosidase F enzyme (PNGase F) was acquired from New England Biolabs (Ipswich, MA, USA). Solvents, including high-performance liquid chromatography (HPLC)-grade water, acetonitrile, methanol, and dimethyl sulfoxide were purchased from Fisher Scientific (Pittsburgh, PA, USA). Pooled CSF was acquired from Golden West Biologicals, Inc. (Temecula, CA, USA).
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3

HPLC-HRMS Analysis of Plant Compounds

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For HPLC-HRMS analyses, H2O was purified with a Barnstead EASYpure RF compact ultrapure water system, and CH3OH (VWR International, Rosny-sous-Bois-cedex, France) and HCOOH (Sigma Aldrich, Steinheim, Germany) were LC-MS grade. The other solvents were of analytical grade. Amentoflavone, luteolin and luteolin-7-glucoside were purchased from Carl Roth (Karlsruhe, Germany). Apigenin and pheophorbide A were purchased from Sigma Aldrich (Steinheim, Germany), and podocarpusflavone A, from Carbosynth (Berkshire, UK). Silica gel 60 for VLC (particle size 0.040–0.063 mm) and LiChroprep® RP-18 (0.040–0.063 mm) for RP-18 column chromatography were purchased from Merck (Darmstadt, Germany). For solid-phase extraction, 5 g or 10 g Isolute® C18 (EC) cartridges (Biotage, Uppsala, Sweden) were used.
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4

Urinary Cortisol Quantification in Damaraland Mole-rats

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For Experiment 1 and the non-experimental samples used for treatment validation, urinary cortisol was quantified using radioimmunoassay kits (Coat a Count, Diagnostic Products Corporation, Los Angeles, CA) validated for Damaraland mole-rats (Clarke et al., 2001) (link). For Experiment 2, a solid-phase extraction was performed using Isolute C18(EC) cartridges (50 mg/1 cc, Biotage) and urinary cortisol quantification was performed with ultra-highpressure liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS). The specific gravity of all urine samples was determined using a digital handheld refractometer (Atago Ltd) to adjust raw cortisol concentrations following Miller et al. (2004) (link) and correct for differences in urine concentrations. Details of the methods followed for sample preparation, analytical procedures, quality control and calculation of intra-and inter-assay coefficient of variation are provided in the electronic supplementary material.
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