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3 protocols using a 11122

1

Comprehensive Protein Expression Profiling

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P53 (WB dilution 1:1000; IF dilution 1:500 Cell Signaling Technology #2524S), p21 (WB dilution 1:500 Cell Signaling Technology #2947S), p16 (WB dilution 1:500 Santa Cruz Biotechnology #S1661), NfkB (WB dilution 1:1,000 Abcam #16502), B23/NPM (IF dilution 1:2,000 Sigma-Aldrich #B0556), Map2 (IF dilution 1:2,000 Novus Biologicals #NB300-213), GAPDH (WB dilution 1:5000 Fitzgerald #10R-G109A), GFP (WB dilution 1:1,000 Proteintech #50430-2-AP), Neun (IF dilution 1:2,000 Novus Biologicals #NBP1-92693), NEFL (IF dilution 1:2,000, ProteinTech Cat# 12998-1-AP), Lamin (IF dilution 1:1,000 ThermoScientific # MA3-1000), CC3 (WB dilution 1:500, IF dilution 1:500 Cell Signaling Technologies # 9661), anti-rabbit HRP (WB dilution 1:10,000 Cytiva #NA9340), anti-mouse HRP (WB dilution 1:10,000 Cytiva #NA9310), anti-mouse 546 Alexa Fluor (IF dilution 1:1,000 Life Technologies #A10036), anti-chicken 647 Alexa Fluor (IF dilution 1:1,000 Life Technologies #A-21463). For flies experiment: GFP (WB dilution: 1:3000 Thermo Fisher #A-11122), alpha-tubulin (WB dilution 1:10000 Proteintech # 66031-1-Ig).
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2

Western Blot Analysis of Stress Granule Proteins

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U-2OS cells, at a 70-80% confluency, were harvested by scraping from a 6-well plate. Cells were lysed and rotated in RIPA buffer (20 mM Tris-HCl at pH 7.5-7.7, 150 mM NaCl, 1% NP-40, 0.5% DOC, 0.05% SDS) supplemented with a protease inhibitor cocktail (Sigma-Aldrich, 4693159001) for 30 min at 4°C. Samples were analyzed by SDS-PAGE electrophoresis. G3BP1 (Bethyl, A302-033A, 1:1000), G3BP2 (Abcam, ab86135, 1:1000), eIF2α (Cell Signaling Technology, 9722S, 1:1000), p-eIF2α (Abcam, ab32157, 1:1000), GFP (Thermo Scientific , A-11122, 1:1000), Caprin-1 (Proteintech, 15112-1-AP, 1:1000), β-actin (Abcam, ab184092, 1:5000) were detected by western blot. Secondary antibody (LI-COR Biosciences, 926-32211, 1:10000) was detected with a LI-COR Odyssey DLx imaging system.
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3

Protein Extraction and Immunoblotting Protocol

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Protein was extracted using RIPA lysis buffer supplemented with Halt protease and phosphatase inhibitor cocktail (Thermo Fisher). Protein quantification was performed with a DC Protein Assay Kit (Bio-Rad). Equal amounts of protein were separated on NuPAGE 4-12% Bis-Tris mini gels (Life Technologies) and transferred to polyvinylidene difluoride membrane (Millipore). The membrane was incubated with primary antibodies and visualized with an HRP/chemiluminescence kit on the ChemiDoc Imaging System (Bio-Rad). The primary antibodies used in the present study were phospho-AKT (CST, 4060, 1:1,000), AKT (CST, 4691, 1:1,000), AKT1 (CST, 2938, 1:1,000), AKT2 (CST, 3063, 1:1000), phosphor-GSK3β (Ser9, CST, 5558, 1:1000) , GSK3β (CST, 12456, 1:1,000), xCT (Abcam, ab37185, 1:1,000), NQO1 (Abcam, ab34173, 1:1,000), GCLC (Abcam, ab41463, 1:1,000), HA-tag (CST, 3724, 1:1,000), EGFP (Thermo Fisher, A-11122; Proteintech, 66002-1-lg, 1:1,000), β-actin (CST, 4967, 1:2,000).
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