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Luna 2

Manufactured by Logos Biosystems
Sourced in Cameroon, France, United States

The LUNA-II is an automated cell counter and viability analyzer developed by Logos Biosystems. It utilizes fluorescence microscopy and advanced image processing algorithms to accurately determine cell count and viability in a range of cell types.

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45 protocols using luna 2

1

Cell Viability Assay of Compound Treatments

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HUVECs were plated in 24-well plates at a density of 16,000 cells/cm2 and treated the next day with the indicated concentrations of each compound or vehicle for the designated timepoints. At each timepoint (day 1, 3, or 5), cells were imaged using EVOS™ XL Core (ThermoFisher Scientific, Waltham, MA, USA), harvested, and live cells were counted using the LUNA-II™ cell counter (Logos Biosystems, Anyang-si, Republic of Korea) using trypan blue exclusion.
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2

Cell Growth and Colony Formation Assays

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Cells were harvested 24 h after transfection and seeded at 5 × 103 cells/well on a 96-well plate and incubated at 37 °C. At indicated time points, cell growth was evaluated by adding 10 μl of Cell Counting Kit-8 reagent (Dojindo, Kumamoto, Japan) into each well and incubating for an hour. Absorbance was measured at 450 nm using a spectrophotometer (Thermo Labsystems, Rockford, IL, USA). For a colony formation assay, 5 × 103 to 1 × 104 cells were counted using LUNA-II (Logos Biosystems, Gyeonggi-do, Korea) and plated in a 60-mm culture dish and incubated for 2 to 3 weeks until distinguishable tumor colonies appeared. Colonies were fixed with 70% methanol solution and stained with a 0.01–0.1% crystal violet solution. For a sphere formation assay, cells were plated at a density of 100 cells in a Cultrex 3D Basement Membrane Matrix (Trevigen, Gaithersburg, MD, USA) and cultured for 4 weeks and medium was changed every week.
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3

Quantifying Cell Proliferation and Survival

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Cell proliferation and survival were monitored by sulforhodamine B (SRB) and colony formation assays, as we previously described32 (link),53 (link). For validation, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-2H-tetrazolium bromide (MTT) colorimetric assay was simultaneously used along with SRB assay, as we previously described54 (link). IC10, IC25, IC50, and IC75 values were calculated via non-linear regression analysis using TableCurve 2D v5.01 software (Systat). For colony assay, 600 ~ 800 cells were seeded in 24- or 6-well plates and allowed to expand for 3 days in drug-free media. Drug treatment started at day 3 and lasted for 4 days and media was replaced and colonies were further incubated for additional 7 days in drug-free media. Colonies > 0.20 mm diameter were counted and quantified using the ColonyArea plugin in Fiji/ImageJ (NIH software). Cell confluence was determined using an automated cell counter (Luna-II, Logos Biosystems).
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4

BT549 Cell Proliferation Assay

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BT549 cells were divided into 24-well plates with 1000 cells per well. After allowing the cells to adhere, cells were treated with CHNQD-00824 at a concentration of 5 μM. The DMSO-treated group was used as a negative control. Three wells of each treatment group were digested every 24 h and counted separately using an Automated Cell Counter (LUNA-II, logos biosystems). Counts were performed for 7 consecutive days. A cell proliferation curve was drawn to compare the cell proliferation rate.
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5

Colorectal Cancer Sphere Culture

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A prepared primary colorectal cancer single cell suspension was counted (Luna II; Logos Biosystems, Anyang, Korea), and 1×106 cells were added into tumor stem cell culture medium suspension for culture, and shaken 1 time every 6 h on the 1st and 2nd days to prevent cell adherence. When the cell spheres became larger and the brightness decreased, the structure was loosened. Accutase enzyme (Thermo Fisher Scientific, Inc.) was used for digestion passage. The parental cells and the passaged cells were cultured in a 6-well plate at 1×105 cells/well for approximately 6 days, the conglomeration rate was calculated. The surface antigen (EPCAM and CD133) of the primary colorectal cancer cells was sorted by flow cytometry, and the proportion of side population cells was counted and analyzed.
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6

Ceramics-Induced THP-1 Cell Viability

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Adherent THP-1 cells were treated with ceramics as per the protocol above. Cells were then treated with 1 mL Accutase (Sigma-Aldrich) and incubated for 15 min in order to detach the cells from the tissue culture plate. Following incubation, the cells were collected in Eppendorf tubes and centrifuged at 5500×g for 5 min. The cell supernatant was removed, and the cells were resuspended in 200 μL complete RPMI-1640 medium. 10 μL of cell suspension was then mixed with 10 μL trypan blue (Sigma-Aldrich) and mixed gently. 10 μL of this mixed solution was then used on a Luna cell counting slide in conjunction with the Luna II (Logos Biosystems, Seoul, South Korea) fully automated cell counter in order to calculate percentage viability. Additional THP-1 cells were seeded at a density of 50,000 cells per well of a 96-well tissue culture plate and treated in accordance with the protocol above. The XTT Cell Proliferation Kit II (Sigma-Aldrich) was used according to the manufacturer’s instructions and absorbance read using a BioTek Synergy HT microplate reader at 450 nm.
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7

Cultivation and Characterization of ARPE-19 Cells

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ARPE-19 cells were obtained from the Cell Culture Collection of the Koltzov Institute of Developmental Biology of Russian Academy of Sciences. RPE cell suspension at a concentration of 0.5 × 106 (cells/dishes) was cultured in a supplemented culture media DMEM/F12 containing 10% of embryonic veal serum, 2 mM L-glutamine, and antibiotic–antimycotic (streptomycin, amphotericin B, penicillin) from Gibco (Thermo Fisher Scientific, Waltham, MA, USA). Cultivation was carried out in Petri dishes (d = 35 mm) under standard conditions (37 °C, 5% CO2) for 3 days. Thereafter, a change in complete nutrient medium was carried out. When the cells reached 70% of confluence, the nutrient medium was completely removed and 500 µL of accutase solution (Thermo Fisher Scientific, Waltham, Massachusetts, USA) was added, followed by incubation for 10 min. Then, the complete nutrient medium was added to the cell suspension to dilute the accutase 10 times. The resulting cell suspension was centrifuged (1100 rpm, 5 min, 37 °C). After centrifugation, the supernatant was removed and 1 mL of complete nutrient medium was added. To count the cells, the resulting suspension was placed in 10 µL disposable slides. An automatic counter of cells, Luna II (Logos biosystems, Anyang, Korea), was used.
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8

Bronchoalveolar Lavage Cell Counting

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In the other set of mice, bronchoalveolar lavage was performed as previously described by our group [16 (link)]. Briefly, lungs were washed three times with 0.7 mL of sterile saline. Total cells were counted using an automated cell counter (LUNA-II, Logos Biosystems, France) and the BAL fluid was centrifuged at 1000× g for 10 min. The supernatant was stored at −80 °C until further analyses and the pellet was resuspended in PBS for differential cell counts. A volume of 100 µL of resuspended cells adjusted to 0.75 × 106 cells/mL were spun at 450 rpm for 6 min (Cytospin™4 cytocentrifuge, Thermo Fisher Scientific, Waltham, MA, USA) onto microscope slides. Slides were air-dried, fixed in methanol for 10 min and stained with May–Grünwald (Química Clínica Aplicada S.A, Tarragona, Spain) for 5 min and 30% Giemsa (Merck, Darmstadt, Germany) for 15 min. Counts of macrophages, neutrophils, eosinophils, basophils and lymphocytes were carried out in a total of 400 cells from each sample in a blinded manner.
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9

Anti-Fouling Microfluidic Cell Capture

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The microfluidic chips were sanitized using UV radiation and primed using a 5% (w/w) PEO-terminated triblock polymer (Pluronic® F108, BASF) in DI water overnight before use. The devices were primed at least 7 days after plasma activation to ensure PDMS restored its hydrophobicity to ensure quality F108 anti-fouling coating.36 (link),37 (link) Before cell loading, channels were washed by phosphate-buffered saline (PBS) for one hour. MDA-MB-231 cells were first stained by 10 μM green CellTracker dye (ThermoFisher C2925) following the manufacturer’s protocol and then suspended using Trypsin-EDTA (Gibco 25200). Cell concentrations were calculated using an automatic cell counter (LUNA-II, Logos Biosystems). Different concentrations, including 25k cells per mL, 50k cells per mL, 100k cells per mL, and 200k cells per mL, were used for test. 500 μL of the cell suspension solution was then pipetted into the chip inlets, and the cells were driven into the chip by gravity flow. The initial flow rate was adjusted to be 20 μL min−1. After cell loading for 15 minutes, the cell suspension solution was replaced by 500 μL of the PBS to stop the loading and the chips were scanned to readout capture results.
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10

Single-Cell RNA-Seq Workflow with 10X Genomics

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Cells were washed and trypsinized using ReagentPack™ Subculture Reagents (Lonza Bioscience). Single cell suspensions were washed with PBS + 5% FBS, resuspended in 200 μL PBS + 5% FBS, passed through a 70 μm filter, and placed on ice. Cells were counted using trypan blue exclusion on a Luna II (Logos Biosystems). The appropriate numbers of cells to achieve a targeted cell input of 5,000 cells per condition were used to generate the GEMs (Gel Bead-In Emulsion). The Chromium Next GEM Single Cell 3’ Gel beads v3.1 kit (10X Genomics, Pleasanton, CA, USA) was used to create GEMs following manufacturer’s instruction. All samples and reagents were prepared and loaded into the chip and ran in the Chromium Controller for GEM generation and barcoding. GEMs generated were used for cDNA synthesis and library preparation using the Chromium Single Cell 3’ Library Kit v3.1 (10X Genomics) following the manufacturer’s instruction.
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