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7 protocols using incucyte zoom 2018a software

1

Cell Growth Monitoring by IncuCyte Zoom

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Cells were seeded at a density of 40,000 cells/well in 12-well plates. Cell growth was monitored every 2 h by the IncuCyte Zoom live-cell analysis system (Essen BioScience Ltd.). Cell density was quantified by IncuCyte Zoom 2018A software (Essen BioScience Ltd.).
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2

Pericyte Proliferation Assay

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Pericytes were seeded at 8000 cells/mL into two 6‐well cell culture plate (Corning Inc., Corning, NY, USA) precoated with gelatin (Cell Biologics Inc.) in either Dulbecco's modified Eagle media (DMEM) with 4.5 g·L−1 glucose, l‐glutamine, and sodium pyruvate (Corning Inc.) supplemented with +5% FBS (Corning Inc.) +1% penicillin/streptomycin (P/S) (Corning Inc.) or endothelial growth medium 2 (EGM‐2; Cell Biologics, Inc., Chicago, IL, USA) supplemented with the ECs medium supplement kit (Catalog M1168, Cell Biologics Inc., Chicago, IL, USA). Cells were seeded at 10 000 cells per well into a 24‐well cell culture plate (Corning) precoated with gelatin (Cell Biologics Inc.) in cell culture media. After 6 h for cells to attach, media was changed to include LDL (Sigma) or dglucose (Sigma). Plates were placed into an Incucyte Zoom instrument (EssenBioscience Inc., Ann Arbor, MI, USA) integrated with the incucyte zoom 2018A software (EssenBioscience Inc., Ann Arbor, MI, USA), and growth was monitored for 5 days to construct proliferation curves.
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3

Cell Migration Assays with IncuCyte

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For spontaneous migration assay, 1000 cells were seeded into wells of 96-well IncuCyte ImageLock plates. Migration assay was performed using IncuCyte® Live Cell Analysis Imaging System (Essen BioScience, Ltd., Royston, UK) for 72 h with images taken every 2 h. Using Manual Tracking plug-in (ImageJ, version 1.52p, F. Cordelieres, Institute Curie, Paris, France), cellular trajectory, velocity, and distance covered by a single cell were determined. End-point directionality was calculated as the ratio between straight-line displacement (distance to origin, DTO) and total path traveled by the cell (total distance, TD) [62 (link)]. For each parameters, 30 cells (10 cells per clone) per group were analyzed.
For collective migration assay, cells were cultured in 96-well IncuCyte® ImageLock plates. Upon reaching the confluence by the cells, wounds in the cells’ monolayers were done using IncuCyte® WoundMaker. Then, the closure of the wound was followed using IncuCyte® Live Cell Analysis Imaging System. Images collected every 2 h for 48 h were used for data analysis (IncuCyte® ZOOM 2018A software, Essen BioScience, Ltd., Royston, UK), which was presented as a percent of scratch overgrown by the cells over time.
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4

Live-Cell Imaging of Cell Seeding

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Cells were seeded in 12-well plates with a density of 20,000 cells/well. The plates were placed in IncuCyte live-cell imaging and analysis platform (Essen Bioscience) after cells attaching to the plates. Plates were imaged every 2 hr, and pictures were processed and analyzed using IncuCyte ZOOM 2018A software (Essen Bioscience).
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5

Live-Cell Imaging of Cell Growth

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For each biological replicate, cells were seeded as technical replicates at 5000 cells per well of a 96-well plate. Live-cell imaging was acquired at 10× magnification every 2 h, and percentage phase confluency was quantified using Incucyte ZOOM 2018A software (Essen Bioscience). Doubling times were calculated in GraphPad prism V.8 during the exponential growth phase using the exponential growth equation.
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6

Apoptosis Monitoring in Cancer Cells

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SNG-M, HCT116, A375, and SK-BR-3 cells were each seeded as per supernatant ELISAs and allowed to form monolayers overnight before addition of 0.5 μM (final) IncuCyte Caspase-3/7 Green Dye for Apoptosis (4440, Sartorius), either with or without 10,000 T cells per well. For the PDX assay, target cells were seeded as per supernatant ELISAs. The following day, ACL4 medium was washed out to R10 medium and 0.5 μM (final) IncuCyte Caspase-3/7 Green Dye for Apoptosis (4440, Sartorius), either with or without 80,000 T cells per well.
Plates were imaged from this point using the phase and green fluorescence channels in the IncuCyte ZOOM system (Sartorius) with 10× objective lens at 2-h (3 h for PDX assays) repeating intervals. The number of caspase 3/7 positive cells (apoptotic target cells) per millimeter squared over time was enumerated for all conditions up to 72 h after T-cell addition using IncuCyte ZOOM 2018A software (Sartorius)—dying T cells were gated out by size exclusion.
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7

Apoptotic Response of H-EMC-SS Cells to Anti-DR5 Agents

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H-EMC-SS cells were plated at 10,000 cells/well in complete media and incubated overnight (37°C; 5% CO2) with working dilutions of INBRX-109 ± Z-VAD-FMK (final concentration, 50 μmol/L; Promega, Catalog No. G7223B), bivalent anti-DR5, trivalent recombinant TRAIL, or hexavalent anti-DR5. Caspase-3/7 green (Essen BioScience, Catalog No. 4440) was then added at a final concentration of 2.5 μmol/L. The plate was incubated at room temperature for 5 minutes, and live-cell imaging was performed every 30 minutes for 16 hours using an Incucyte S3 Live-Cell Analysis System (10× objective; Sartorius, Catalog No. 4647; RRID: SCR_023147). Images were analyzed using Incucyte ZOOM 2018A software version 6.2.9200.0 (Sartorius). All data were background corrected using the no-treatment condition.
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