The largest database of trusted experimental protocols

77 protocols using uv visible spectrophotometer

1

Total RNA Extraction and cDNA Synthesis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted from tissues with the TransZol RNA isolation kit according to the instruction (TransGen Biotech Co. Ltd, Beijing, China). The concentration and purity of RNA were determined by UV-visible spectrophotometer (Thermo Fisher Scientific, Wilmington, DE). The integrity of RNA was detected by 1% agarose gel electrophoresis. Subsequently, 1,000 ng valid RNA samples were reverse-transcribed to synthesize the first-strand cDNA in 20 μL reaction system with a HiScript II 1st Strand cDNA Synthesis Kit (plus gDNA wiper) (Vazyme Biotech Co. Ltd, Nanjing, China).
+ Open protocol
+ Expand
2

UV-Vis Spectral Analysis of GSAN

Check if the same lab product or an alternative is used in the 5 most similar protocols
UV/visible spectra of all GSAN formulations were recorded using a UV/visible spectrophotometer (Thermo-fisher scientific, USA). In brief, 5 μl from each GSAN stock were diluted with 2 ml of DI water. Since the stock concentrations ranged from 3.9 to 8.5 mg Ag/ml (Ag-50 to Ag-100), the diluted samples ranged from of 9.8 to 21.3 μg Ag/ml. The diluted samples were used to record UV-visible spectra. The absorbances of the GSAN were normalized such that the maximum absorbance for each sample was set to 1.
+ Open protocol
+ Expand
3

Spectrophotometric Chlorophyll Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
By using the non-maceration method (Hiscox and Israelstam, 1979 (link)), Total Chlorophyll was measured spectrophotometrically (UV-Visible Spectrophotometer, Thermo, United States) by incubating a leaf sample (0.05 g) in the test tubes containing 10 mL of dimethyl sulfoxide. The test tubes were placed in a water bath maintained at 60°C for 60 min. Absorbance was recorded at 645 and 663 nm after placing the tubes at room temperature for 30 min. Total chlorophyll was calculated using the following formula given by Arnon (1949) (link):
Where; OD663 is absorbance at 663 nm and OD645 is absorbance at 645 nm.
+ Open protocol
+ Expand
4

Peroxidase Activity Assay in Frozen Roots

Check if the same lab product or an alternative is used in the 5 most similar protocols
Peroxidase (POD; EC 1.11.1.7) activity of frozen root samples was measured as per the modified method of using guaiacol as substrate (electron donor) (Castillo et al., 1984 (link); Prakash et al., 2016 (link)). The root samples (100 mg) were homogenized using tissue lyzer (EzLyzer, Genetix, Biotech Asia, Pvt. Ltd.) in 300 µl extraction buffer (0.1 M phosphate buffer and 0.1 mM EDTA, pH 7.0). Lysates were centrifuged for 20 min at 15,000 × g at 4°C temperature, and the supernatants were collected and stored for assay. The 3-ml reaction mixture contained 16 mM guaiacol, 2 mM H2O2, 50 mM phosphate buffer (pH 6.1), and 0.1 ml enzyme extract. The change in optical density (OD) of the reaction mixture was recorded at 436 nm for a period of 3 min in time scan mode using a UV-Visible spectrophotometer (Thermo Scientific, USA). The result was presented as a change in OD per min/g fresh weight.
+ Open protocol
+ Expand
5

Quantifying Total Polyphenol Content

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Folin-Ciocalteu method previously detailed by Waterhouse was utilized to quantify total polyphenol content (TPC) [35 (link)]. Essentially, the Folin-Ciocalteu reagent and the extract were allowed to incubate at room temperature. The sodium carbonate solution was used to quench the reaction and sample absorbance was measured immediately using a UV-visible spectrophotometer (Thermo Fisher; Waltham, MA, USA) at 765 nm. Therefore, TPC was calculated as gallic equivalents (GE) using a standard curve prepared under the same conditions.
+ Open protocol
+ Expand
6

Measurement of Glutathione S-Transferase and Catalase Activity in Tenocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
The specific activity of the GST in tenocytes was measured according to Zhang et al. [64 (link)], using 5 mM GSH and 0.5 mM CDNB as the second substrate in 0.1 M potassium phosphate buffer pH 6.5 at room temperature. The changes in absorbance at 340 nm were monitored for 5 min with the UV/visible spectrophotometer (Thermo-Fisher Scientific, Waltham, MA, USA). The molar extinction coefficient used for CDNB conjugation was 9.6 mM−1 cm−1. Enzymatic activities were calculated after correction for the non-enzymatic reaction.
The CAT activity in horse tenocytes was measured using the CAT activity assay kit according to the manufacturer’s instructions (Elabscience, E-BC-K031-S). The UV/visible spectrophotometer used to measure CAT activity was a JascoV-550 ETC 505S (Portland, OR, USA).
+ Open protocol
+ Expand
7

Quantifying Hydroxymethylfurfural in Honey

Check if the same lab product or an alternative is used in the 5 most similar protocols
The HMF content was determined based on the UV absorbance of HMF at 284 nm using a UV-Visible spectrophotometer (Thermo Fisher Scientific, Waltham, MA, USA) [32 (link)]. In order to avoid the interference of other components at this wavelength, the difference between the absorbance of a clear aqueous honey solution and the same solution after the addition of bisulfite was determined. The HMF content was calculated after the subtraction of the background absorbance at 336 nm. In a 50 mL volumetric flask containing 2 mg of honey dissolved in 25 mL of water, 0.5 mL of Carez I solution was added, followed by 0.5 mL of Carez II solution. Water was added to the flask to make up a volume of 50 mL, and the resulting solution was filtered. After discarding the first 5 mL of the filtrate, 5 mL of 0.2% sodium bisulfite solution was added to the test tube. In another test tube, 5 mL of pure water was added as a blank. A UV-Visible spectrophotometer was used to measure the solution’s absorbance at 284 and 336 nm in 10 mm quartz cells within 1 h. The calculation was performed using the formula below: HMF (mg/kg)=(A284A336) × 149.7 × 5 × DW
It should be noted that 149.7 is a constant, A284 is the absorbance at 284 nm, A336 is the absorbance at 336 nm, 5 is the theoretical nominal sample weight, D is the dilution factor (in case dilution is necessary), and W is the weight of honey taken.
+ Open protocol
+ Expand
8

Photocatalytic Degradation of Methylene Blue

Check if the same lab product or an alternative is used in the 5 most similar protocols
The photocatalytic performance of the catalysts was evaluated by MB degradation under sunlight irradiation at pH 7 at varying temperatures from 25 °C to 35 °C.40 (link) 50 mg of VTS photocatalyst was added to 100 mL of MB solution (10−4 M). To reach the adsorption equilibrium, the experiment was carried out in dark conditions for 30 min. During the photocatalytic experiment, the solution was collected at various times, and the photocatalyst was separated from the solution by centrifugation. The absorbances of the collected samples were verified using a Thermo Fisher UV-Visible spectrophotometer.
+ Open protocol
+ Expand
9

Curcumin Encapsulation Efficiency Measurement

Check if the same lab product or an alternative is used in the 5 most similar protocols
Encapsulation efficiency was measured using the method of Hu et al. [21 (link)] with slight modifications. One mL of 0.1 M trisodium citrate buffer (pH 6.0) was added to the curcumin encapsulated cryogel beads and stirred at 40 °C for 90 min to degrade the matrix. After all the matrix of cryogel beads was degraded, 0.8 mL of dimethyl sulfoxide (DMSO) was added to extract curcumin and stirred for 3 h. Next, the curcumin extract mixture was centrifuged at 3500 rpm for 10 min, and the supernatant was collected. The undissolved curcumin remaining in the sediment was dissolved again by adding 0.2 mL of DMSO and vortexed for 1 min. The mixture was centrifuged at 3500 rpm for 10 min, and the supernatant was collected. The total supernatant was used to determine the amount of encapsulated curcumin. The curcumin concentration (encapsulated amount of curcumin) in the cryogel beads was measured at 435 nm by a UV-Visible spectrophotometer (Thermo Scientific, Vantaa, Finland) with a calibration curve (0–10 μg/mL free curcumin). Measurements were performed in triplicate. The encapsulation efficiency was determined by using Equation (1), as shown below:
+ Open protocol
+ Expand
10

Heterologous Expression of CYP Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
A single yeast colony harboring FoCYP539A7 and FoCYP655C2 gene was individually inoculated into 10 mL of SD-U (except uracil) medium with 2% dextrose. S. cerevisiae harboring only pESC_URA plasmid without any FoCYP was used as control. The overnight grown cells were inoculated into 50 mL of YPG media with 4% galactose and 2 mM 5-ALA to obtain an OD600 of 0.4 and cultured again. The cells were collected, resuspended in 500 mL of fresh galactose media, and cultured for about 2 days with shaking at 150 rpm until reaching an OD600 of 2-4. The galactose induced yeast cells were then harvested and the microsomes were isolated as described earlier [49 (link)]. UV absorbance spectra of CO-bound microsomes after sodium dithionate reduction were recorded using a UV-visible spectrophotometer (Thermo Labsystems, NY, USA) scanning between the wavelengths 400 and 500 nm.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!