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4 protocols using anti vasa

1

Immunofluorescence Staining of Germ Cell Markers

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The prepared sections were blocked with 3% (w/v) bovine serum albumin (BSA; ZSbio) in PBST (0.1% [v/v] Triton X-100 in PBS) for 1 h at room temperature and then incubated with the following primary antibodies overnight at 4°C: anti-Sycp3 (1:200, Abcam, Cambridge, MA, USA), anti-synaptonemal complex protein 1 (Sycp1; 1:200, Abcam), anti-Vasa (1:500, Abcam), anti-c-kit (1:500, Abcam), anti-Shp2 (1:200, Santa Cruz Biotechnology), anti-Plzf (1:500, Santa Cruz Biotechnology), anti-cleaved caspase 3 (1:200, Cell Signaling Technology, Boston, MA, USA), anti-Dmc1 (1:200, Abcam), anti-Smc3 (1:500, Abcam), and anti-DNA repair recombinase rad51 (Rad51; 1:200, Invitrogen). After being washed three times with PBST, the samples were incubated with the following secondary antibodies at a 1:200 dilution for 1 h at 37°C: Alexa Fluor 594/488-labeled anti-rabbit or anti-mouse IgG (YEASEN, Shanghai, China). The slides were subsequently washed three times in PBST and mounted with Vectashield containing 4’-6-diamidino-2-phenylindole (DAPI; Vector Laboratories, Burlingame, CA, USA).
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2

Zebrafish Embryonic Protein Localization

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Zebrafish embryos at different stages of development were fixed overnight in cold 4% paraformaldehyde-PBS (PFA). Embryos were then dehydrated with methanol for storage at −20°C and rehydrated, washed in PBST [PBS+0.1% Tween 20], permeabilized with cold acetone (20 s), blocked with goat serum for at least 1 h at room temperature. Thereafter, they were incubated with rabbit anti-P54 serum (1:2000), rabbit pre-immune serum, rabbit anti-Dcp2 (Novus Biologicals, NBP2-16109; 1:2000), rabbit anti-TIAL-1 (Novus Biologicals ,NBP1-79932; 1:2000), rabbit anti-phosphorylated non-muscle myosin (NMII-p) (Cell Signaling, 3671) or rabbit anti-DDX4 (anti-Vasa) (Abcam, ab13840), these were diluted in PBST and incubated overnight at 4°C. Labeling was detected using secondary antibody (1:1000) goat anti-rabbit IgG conjugated with Alexa Fluor 488 (Jackson ImmunoResearch, 111-545-003), and nuclei were counterstained with DAPI (4′,6-diamidino-2-phenylindole).
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Antibody Immunoblotting for Stem Cell Markers

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The following antibodies were used were used for immunoblotting. Anti-SOX9 (Merck Millipore, AB5535), anti-HSD3b (TransGenic, KO607), anti-TRA98 (Abcam, ab82527), anti-FLAG (clone M2, Sigma, A8592), anti-VASA (Abcam, ab13840), anti-EPCAM (clone G8.8, eBioscience, no. 14-5791-85), anti-FOXO1 (CST, no. 2880), anti-PLZF (Santa Cruz, H300), anti-c-KIT (BioLegend, no. 105803), anti-JMJD1B (Abvnova, PAB15833), anti-H3K9me1 (Abcam, ab9045), Anti-H3K9me2 (clone 6D11) (Kimura et al., 2008 (link)), anti-H3K9me3 (clone 2F3) (Kimura et al., 2008 (link)), anti-JMJD1A (clone F0618) (Abe et al., 2015 (link)), and anti-JMJD1B (Abvnova, PAB15833). Anti-H3K9me2 (Abcam, Ab1220) was used for ChIP analysis.
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4

Characterization of Pluripotent Stem Cells

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Cells from different culture time points were grown on or adhered to coverslips. The cells were subsequently fixed with 4% paraformaldehyde and blocked in 1× PBS with 5% BSA and 0.05% Triton-X-100 and were subsequently incubated overnight at 4°C with various primary antibodies, including anti-Oct4 (1:200; rabbit origin; AbCam), anti-Sox2 (1:200; rabbit; AbCam), anti-c-Kit (1:80; rabbit; AbCam), anti-Vasa (1:200; rabbit; AbCam), anti-DAZL (1:150; mouse; AbCam), anti-Nanos3 (1:200; rabbit; AbCam), anti-GDF9 (1:200; rabbit; AbCam), or SCP3 (1:400; rabbit; AbCam). Next, the cells were incubated with Cy3 fluorescent dye-conjugated secondary antibodies (Jackson). The cell nuclei were counterstained with 4, 6-diamidino-2-phenylindole (DAPI; Invitrogen).
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