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Chitin azure

Manufactured by Merck Group
Sourced in United States

Chitin azure is a laboratory reagent used as a dye for the detection and quantification of chitinase enzymes. It is a water-soluble chromogenic substrate derived from chitin, a natural polysaccharide found in the exoskeletons of crustaceans and the cell walls of fungi. When cleaved by chitinase enzymes, Chitin azure produces a blue color that can be measured spectrophotometrically.

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6 protocols using chitin azure

1

Chitin Azure Assay for Ft Enzymes

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Independent chitin azure assays were prepared by adding 10 mg of chitin azure (Sigma, St. Louis, MO, USA) to 750 μL of 200 mM sodium phosphate buffer, pH 7.0, followed by one of the following: 94 μg of recombinant FTL1793; 94 µg of recombinant FopA (negative control Ft outer membrane protein; [45 (link)]); 200 U of purified chitinase from Streptomyces griseus (Sigma, St. Louis, MO, USA); or buffer alone (buffer control). Recombinant FopA was prepared as previously described [45 (link)]. Enzyme assays were prepared in triplicates and incubated end-over-end at 37 °C. Enzyme activity was assessed every 24 h for 30 d, with samples being centrifuged at 7000× g for 10 min, and the supernatant absorbance at 570 nm being measured. After absorbance measurements were recorded, samples were resuspended and returned to the incubated carousel for further analysis.
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2

Chitinase Activity Assay for Msp1

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First, the chitinase activity of Msp1 was investigated based on breakdown of chitin-azure (Sigma), as described previously74 (link). Further confirmation was based on inhibition of chitinase activity by 2.5 mM Bisdionine C (Sigma), as described previously75 (link).
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3

Antimicrobial Assays and Cell Infection

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Chromobacterium violaceum ATCC 12472 and Pseudomonas aeruginosa PAO1 are the test strains used in the study. Cultures were maintained in Luria–Bertani (LB) broth and routinely subcultured. BAC standard (Sigma-Aldrich, United States) was dissolved in dimethyl sulfoxide (Merck) and was sterilized using a 0.22-μm PVDF membrane filter. Chitin azure, azocasein, and elastin congo red were procured from Sigma-Aldrich (Sigma-Aldrich, United States), Maxima H Minus Reverse Transcriptase from Thermo Scientific, and FastStart Universal SYBR Green Master Mix from Roche (USA). The A549 lung epithelial cell carcinoma cell line was procured from the National Center for Cell Sciences, India, for in vitro infection studies.
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4

Enzymatic Characterization of Chitosan Derivatives

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Chitin azure, chitin from shrimp shells,
glycol chitosan, Schiff’s reagent, 4-nitrophenyl-N-acetylglucosamine (GlcNAc-pNP), 4-nitrophenyl-N,N′-diacetyl-β-d-chitobioside ((GlcNAc)2-pNP), and 4-nitrophenyl-β-d-N,N,N″-triacetylchitotriose
((GlcNAc)3-pNP), were obtained from Sigma-Aldrich
(St. Louis, USA). Oxidized chitosan (Mw 100 kDa, DDA 84%, degree of
oxidation 5%, containing C6-aldehyde and carboxyl groups in a ratio
of 20:1) was produced at Wageningen Food & Biobased Research (Wageningen,
The Netherlands). Hydroxypropyl-chitosan was a kind gift from Nippon
Suisan (Japan). Chitin oligosaccharides (GlcNAc)2–6 were obtained from Megazyme (Co. Wicklow, Ireland). Chitosans were
purchased from Heppe Medical Chitosan GmbH (Halle, Germany) and Nippon
Suisan Kaisha LTD (Tokyo, Japan). The deacetylation degree (DDA in
%) and molecular weight (Mw in kDa) are chitosan 88 DDA/3000 and chitosan
90 DDA/100 (Nippon Suisan Kaisha LTD), chitosan 77 DDA/600, chitosan
78 DDA/600, chitosan 91 DDA/600 and chitosan 94 DDA/600 (Heppe Medical
Chitosan GmbH). All other chemicals were of the highest purity available.
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5

Polysaccharide Extraction and Analysis

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Laminarin (from Laminaria digitata), Chitin azure, trans-cinnamic acid, and salicylic acid were purchased from Sigma (St. Louis, MO, USA). Curdlan was purchased from Takeda Chemical Industries, Ltd. (Osaka, Japan). Other materials and chemicals were all analytical grade, and purchased from Sinopharm Chemical Reagents Co. Ltd. (Shanghai, China).
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6

Chitin Azure Chitinase Substrate Assay

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At the first trifoliate stage, two weeks after planting, the seedlings were used for an experiment with technical grade chitin azure, a chitinase substrate (Sigma-Aldrich, cat# C3020). A modified stem-cut method was used to administer the chitin treatment28 (link). For each genotype, nine seedlings were treated with chitin and nine were with buffer in each experiment. We conducted three experiments. In half of the chitin treatment, the stem-cuts received 0.5 mL of 100 µmol/L chitin in sodium phosphate (15 mmol/L, pH 6.5); and in controls, stem-cuts received 0.5 mL of sodium phosphate buffer (15 mmol/L, pH 6.5) only. The stem-cuts were placed in 2-ml Eppendorf tubes containing either chitin suspension or phosphate buffer. After the treatment suspensions were depleted, all stem-cuts were transferred to 50-ml tube containing 25 ml distilled water and incubated in a growth chamber maintained at 22.5 °C, 16 h light (85 µmol m−2 s−1) and 8 h dark photoperiod. Leaf samples were harvested at 12 and 24 h post-treatment. Collected leaves were immediately placed in liquid nitrogen and stored at − 80 °C for RNA isolation.
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