The largest database of trusted experimental protocols

2 protocols using sitox

1

Evaluating miRNA Mimics in Breast Cancer

Check if the same lab product or an alternative is used in the 5 most similar protocols
For MDA-MB-231 and BT549 cells, miRIDIAN miRNA mimics (Dharmacon, Lafayette, CO, USA) were transfected into cells using Lipofectamine 2000 (Invitrogen) according to the manufacturer’s protocol for transfecting siRNA. Mimics (final concentration of 50 nM) were mixed with 1 % Lipofectamine 2000 (v/v) diluted in Opti-MEM transfection medium (Invitrogen) and incubated for 20 minutes. The mimics were added dropwise onto cells in growth medium at a final concentration of 50 nM. Fresh medium was replaced 24 h post transfection. A non-radioactive cell proliferation assay (Promega, Madison, WI, USA) was used to assess the number of viable cells. Three biological replicates were conducted.
MDA-MB-436 and HS578T breast cancer cells were reverse transfected with 40 nM of either miR-184 mimic or scrambled using Dharmafect 4 reagent (Dharmacon) following manufacturer’s instructions; SiTox (Dharmacon) was used as a positive control. The following day, medium was changed and cells were left in culture for an additional 72 h. To assess viability, CellTiter-Glo (Promega) was added directly into the cell medium (1:2 ratio) and left to incubate for 10 minutes; luminescence was read using FLUOstar Omega plate reader (BMG Labtech, Ortenburg, Germany). The experiment was performed in three biological replicates.
+ Open protocol
+ Expand
2

Kinase Screening Library Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The ‘comprehensive' and ‘sensitizer' screens were performed using a SMARTpool siRNA kinase library from Dharmacon (G-003500-20, Lafayette, CO, USA) that contained 778 siRNA pools comprising 518 kinases and 260 ‘kinase-related genes'. Each siRNA pool consisted of four distinct siRNA species targeting different sequences of a single kinase target transcript. The positive control for cell death in the screen was siTOX (D-001500-01; Dharmacon), a proprietary siRNA that targets genes responsible for apoptosis and cell death. The negative control was ON-TARGET siSCR (D-001810-10; Dharmacon). It should be noted that, since our purchase of this library in 2005, 49 annotated genes for which siRNAs were present in the library have lost their NCBI accession numbers. These genes are indicated with an asterisk in the data analyses.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!