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3 protocols using ab13219

1

Immunohistochemical Analysis of NPC Markers

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Core tissues that were 2 mm in diameter were obtained from the representative formalin-fixed paraffin-embedded NPC samples were sectioned at 4-µm thickness. Antigen retrieval was performed using a pressure cooker for 30 min in 0.01 mol/L citrate buffer (pH 6.0). The specimens were incubated with antibodies specific for CD163 (1:200; Abcam, catalog no. ab182422) and ISG15 (1:100; Novus, catalog no. NB600-891). Two independent pathologists (T-Z Zhang, L Zhang) who were blind to the clinical status of the patients counted the stained numbers of CD163+, ISG15+, and ISG15+CD163+ cells in the intratumoral area under a microscope. For immunofluorescence staining, the formalin-fixed paraffin-embedded specimens of NPC were incubated with antibodies specific for CD163 (1:100; Abcam, catalog no. ab182422) and ISG15 (1:100; Novus, catalog no. NB600-891), or the macrophages slide were incubated with antibodies specific for ISG15 (1:100; Novus, catalog no. NB600-891) and CD11+CD18 (1:100; Abcam, catalog no. ab13219) overnight at 4°C, followed by incubation with Alexa Fluor 555 donkey anti-rabbit IgG and Alexa Fluor 488 donkey anti-mouse IgG (Life Technologies). Cells stained with the indicated antibody were imaged using a confocal laser-scanning microscope (Carl Zeiss) with a core data acquisition system.
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2

Evaluating Neutrophil Adhesion Markers in IVIG Infusion

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Venous blood into EDTA or ACD drawn immediately pre- and 24±4 hours post- infusion was evaluated by flow cytometry for adhesion markers on CD16b+ (ID3, Beckman Coulter) neutrophils: activated Mac-1 (CBRM1/5, eBioscience) or activated β2 integrin (ab13219, abcam), Mac-1 (ICRF44, BD Pharmingen), CD44 (G44-26, BD Pharmingen), E-selectin-Fc chimera (R&D Systems), L-selectin (DREG-56, eBioscience), LFA-1 (HI111 BD Pharmingen), and PSGL-1 (KPL-1, BD Pharmingen). Activated Mac-1 Ab detects the functionally active form of Mac-1(was performed on 200–800 mg/kg cohorts) and activated β2 integrin recognizes the high affinity conformation of β2 integrin, the β subunit of LFA-1 and Mac-1 (was performed on 100 mg/kg cohort).
With late afternoon or evening study drug administration, samples were stored overnight as needed (range 8–24 hours) at 4°C prior to analysis. When stored overnight, all paired pre-IVIG and 24 hour post-IVIG samples per patient were stored for uniform lengths of time. No adhesion markers except activated Mac-1 show expression increase at 24 hr compared to immediate analysis (Figure 1B). Since the time interval to analysis was constant for each subject’s two samples, the ratio between the two samples (Figure 1A) was unaffected by storage.
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3

Western Blot Analysis of EV Markers

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MSC-exos, cells and kidney tissues were lysed in RIPA lysis buffer (ThermoFisher) and the protein concentration was detected using BCA assay (ThermoFisher). Protein samples were subjected to Bis-Tris Gel (Invitrogen) and transferred onto PVDF membranes (Millipore). Membranes were blocked in NcmBlot blocking buffer (NCM Biotech) for 10 min and incubated overnight with primary antibodies as follows: anti-CD9 (ab92726, Abcam), anti-CD63 (sc-5275, Santa Cruz), anti-Tsg101 (sc-7964, Santa Cruz) anti-Alix (sc-53540, Santa Cruz), anti-GM130 (12480, Cell Signaling Technology), anti-CD44 (ab189524, Abcam), anti-ICAM-1 (MA5407, Invitrogen), anti-VCAM-1 (39036, Cell Signaling Technology), anti-LFA-1 (ab13219, Abcam), anti-integrin α4 (8440, Cell Signaling Technology), anti-integrin β1 (sc-374429, Santa Cruz), anti-PCNA (sc-56, Santa Cruz), anti-CDK1 (sc-54, Santa Cruz), anti-caspase-3 (ab13847, Abcam), anti-Cyclin B1(4138, Cell Signaling Technology), anti-p53 (2524, Cell Signaling Technology), anti-Bcl-2 (sc-7382, Santa Cruz), and anti-Bax (sc-20067, Santa Cruz). Secondary antibodies were used for detection by an ECL advanced system (GE Healthcare). Intensity values expressed as the relative protein expression were normalized to β-actin (AB2001, Abways) or GAPDH (AB2000, Abways).
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