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29 protocols using pe anti mouse cd4

1

Monitoring Treg and Th Cell Subsets in Mice

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Every eight weeks, six mice from each group were killed in order to periodically monitor the Tregs and Th cell subsets. The Treg and Th cell subset percentages were measured from the spleen using flowcytometry. Cells that had been harvested from the spleen were stained using antibody markers. Treg detection was done by labelling with PE anti-mouse CD4 (Biolegend), PerCP anti-mouse (Biolegend) and FITC anti-mouse FoxP3 (Biolegend). Th cell subsets, including Th1, Th2 and Th17, were also measured in a similar manner. Prior to staining these cells, cells were stimulated with phorbol myristate acetate (PMA; 50 ng/mL; Sigma, St Louis, MO) and ionomycin (1 μg/mL; Sigma) in the presence of brefeldin A (BD Pharmingen, San Diego, CA) for at least four hours. Then, cells were labelled with PE anti-mouse CD4 (Biolegend). Intracellular staining was performed using PerCP anti-mouse IL-4 (Biolegend), FITC anti-mouse IFN-γ (Biolegend) and PerCP anti-mouse IL-17A to detect Th1, Th2 and Th17, consecutively. All staining was performed according to Biolegend manufacture protocols. All cells were analysed with FACSCalibur (Becton Dickinson).
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2

Multicolor Flow Cytometry for Spleen CD4+/CD8+ T Cells

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The spleen samples were stained with CD4 anti-mouse PE (Biolegend), CD8 anti-mouse PerCP (Biolegend), and CD28 anti-mouse FITC (Biolegend). Samples were prepared according to the Biolegend protocol, and flow cytometry was performed with BD FACSMelody (BD Bioscience). The number of cells was analyzed by BD Cell Quest software. The analysis resulted in the percentage (%) of cells. Based on this, we measured the percentage of CD4
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3

Analysis of T-cell Subsets in BALB/c Mice

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Initially, splenocyte isolation from balb/c mouse spleen was performed aseptically after the mouse was sacrificed under deep ether anesthesia. Samples were prepared according to the Biolegend protocol. The spleen samples were colored with CD4 anti-mouse PE (Biolegend, Cat number 100408), CD8 anti-mouse PerCP (Biolegend, Cat number 140417), and CD28 anti-mouse FITC (Biolegend, Cat number 122008). The flow cytometry was carried out with BD FACSMelody by the manufacturer's instructions. The percentages of CD8 +
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4

Single Cell Immune Profiling Protocol

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Single cell suspensions from the spleen and liver were acquired according to the methods previously described (21 (link)) and analyzed using flow cytometry. Antibodies used for flow cytometry staining including Percp-Cy5.5-anti-mouse-CD45.1, APC-Cy7-anti-mouse-CD11b, Percp-Cy5.5-anti-mouse-NK1.1, BV650-anti-mouse-H2-Kb were purchased from BD Bioscience (SanDiego, CA, USA); purified anti-mouse-CD16/32, APC-anti-mouseCD43, PE-anti-mouse-NKp46, APC-anti-mouse-CD107, FITC-anti-mouse-NKG2D, PE-anti-mouse-IFN-γ, PE/Cy7-anti-mouse-TNF-α, FITC-anti-mouse-CD62E, PE-anti-mouse-CD4, PE/Cy7-anti-mouse-CD44, APC/Cy7-anti-mouse-CD62L, Pacific Blue-anti-mouse-CD8a, FITC-anti-mouse-CD69 were purchased from Biolegend (San Diego, CA, USA); PE-Cy7-anti-mouse-Granzyme B, APC-anti-mouse-Perforin were purchased from eBioscience (San Diego, CA, USA). Recombinant Mouse E-Selectin, P-Selectin, and L-Selectin chimera were purchased from Biolegend (San Diego, CA, USA) for detecting the binding abilities. Samples were detected on a NovoCyte Flow Cytometer (ACEA Biosciences, San Diego, CA, USA) and data were analyzed by using Flowjo software (Flowjo, Ashland, OR, USA).
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5

Murine Immune Response Evaluation

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Complete Freund’s adjuvant (CFA) is provided by Chondrex Company (Woodinville, USA). PE anti-mouse CD4, FITC anti-mouse CD8a, and PeCy7 anti-mouse OX40 antibody were supplied by BioLegend (San Diego, CA). InVivo MAb anti-mouse OX40 (clone: OX-86) and InVivoPlus rat IgG2a isotype control (clone: 2A3) were supplied by BioXCell (West Lebanon, USA). IRDye® 680RD NHS Ester Infrared Dye was supplied by Li-cor (Lincoln, USA). Fixable Viability Stain 780 was purchased from BD Pharmingen (San Diego, USA). Dimethyl sulfoxide (DMSO) Hybri-Max (TM) sterile-filtered, BioReagent was purchased from Sigma (St. Louis, MO, USA). AbC™ total antibody compensation bead kit was acquired from Thermo Fisher (Waltham, MA, USA). Paraformaldehyde, 4% and phosphate buffered solution (PBS) was supplied by Solarbio (Beijing, China). Fetal bovine serum (FBS) was purchased from Invitrogen (New York, America).
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6

Multi-modal Immune Cell Profiling

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For surface staining, the cell suspension was incubated with fluorescently labeled antibody at room temperature for 20 minutes. For CD206 staining, the samples were fixed and permeabilised with BD Cytofix/Cytoperm Fixation/Permeabilization Solution kit (BD Biosciences, US), and then incubated with fluorescently labeled antibody at 4 °C for 35 minutes. For intracellular TNF-α staining, the samples were stimulated by LPS (100 ng/ml, Beyotime) for 4 h, fixed and permeabilised, and then incubated with fluorescently labeled antibody at 4 °C for 35 minutes. Bacteria were stained using the BacLight™ Red kit (Invitrogen, B-35001). miRNA was labelled with fluorescein amidites (FAM). The monoclonal antibodies used were as follows: APC-Cy7-anti-Mouse F4/80, Pacific Blue-anti-Mouse CD11b, FITC-anti-Mouse CD11c, APC-anti-Mouse CD206, APC-Cy7-anti-Mouse TCRβ, APC-anti-Mouse NK1.1, PerCP-Cy5-5-anti-Mouse CD45, PE-Cy7-anti-Mouse CD3, PE-anti-Mouse CD4, FITC-anti-Mouse CD8, APC-anti-Mouse TNF-α, all purchased from Biolegend; FITC-anti-Human CD86 (20 μl/ test), APC-anti-Human CD206 (20 μl/test), purchased from BD Pharmingen. Flow cytometry or Image Stream was conducted using a BD FACS CantoII or Millipore ISX with fluorochrome-conjugated cells, and the data was analysed using FlowJo software version 10.4 or IDEAS version 6.0.
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7

AURKA and BET Bromodomain Inhibitors in MDA-MB-231 Cells

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AURKA inhibitors VX‐680 and MLN8237 and bromodomain and extra‐terminal (BET) bromodomain inhibitor JQ1 were obtained from Selleck Chemicals (Houston, TX, USA) and dissolved in dimethyl sulfoxide (DMSO). MDA‐MB‐231 cells were treated with 0.1, 0.2, and 0.4 μmol/L VX‐680 and 0.1, 0.2, 0.4, and 0.8 μmol/L MLN8237 for 24 h. MDA‐MB‐231 cells with NLS‐AURKA were treated with 1 and 5 μmol/L JQ1 for 48 h for Western blotting detection. Antibodies against AURKA and phospho‐AURKA (T288) were purchased from Sigma‐Aldrich (St. Louis, MO, USA). Glyceraldehyde 3‐phosphate dehydrogenase (GAPDH), goat anti‐mouse IgG‐horse radish peroxidase (HRP), and goat anti‐rabbit IgG‐HRP were obtained from Cell Signaling (Danvers, MA, USA). c‐Myc was purchased from Santa Cruz Biotechnology (Dallas, TX, USA). PD‐L1 was obtained from Abcam (Cambridge, MA, USA). TruStain FcX™ anti‐mouse CD16/32, PerCP anti‐mouse CD45, FITC anti‐mouse CD3, PE anti‐mouse CD4, APC anti‐mouse CD8a, and PE anti‐mouse CD69 used in flow cytometric analysis were purchased from Biolegend (San Diego, CA, USA). PE anti‐human PD‐L1 and its isotype control PE anti‐human IgGk1 were obtained from BD Pharmingen (San Diego, CA, USA).
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8

Quantitative Analysis of Regulatory T Cells

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For evaluating the frequency of Treg cells, splenocytes were first surface stained with PE anti-mouse CD4 (Biolegend) and FITC anti-mouse CD25 (Biolegend). After permeabilization with Foxp3 buffer set (BD Biosciences), cells were incubated with PerCP/Cy5.5 anti-mouse Foxp3 for intracellular staining. Finally, Data were acquired and analyzed with FACSCalibur flow and flowJo software (Version 10).
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9

Enrichment and Functional Analysis of Dendritic Cells

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After the spleens were grinded into single cells and red blood cells were lysed, CD11c+ DCs were enriched with CD11c Microbeads UltraPure (Miltenyi Biotech, cat. 130-108-338, Cambridge, MA, USA). 2 × 105 CD11c+ DCs were incubated with 600 µg Flag-tagged Xcl1-S, S or vector plasmid transfected 293T cell lysate for 30 min. Then, the cells were washed two times with PBS and subjected to FITC anti-Flag antibody (Abcam, cat. ab117505) for 30 min measured by flow cytometry using a FACS CANTO TWO flow cytometer (BD Biosciences). 1 × 106 C57BL/6 mice splenocytes were plated on a 24-well plate supplied with overlapping peptides covering the SARS-CoV-2 S protein for 18 h at 37 °C in 5% CO2 to stimulate T cell. Mice splenocytes were collected, and intracellular cytokine levels were measured by flow cytometry using a FACS CANTO TWO flow cytometer (BD Biosciences) after permeabilization and fixation of the cells (BD Biosciences). Cells were stained using the following antibodies from Biolegend: FITC anti-mouse CD8a, PE anti-mouse CD4 and APC anti-mouse IFN-γ. Finally, the results were examined with FlowJo software (FlowJo LLC, Ashland, OR, USA).
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10

Immune Cell Profiling of MC38 Tumors

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At the end of the experiment, excised MC38 tumors from mice treated with CBPA (10 mg/kg) or the vehicle control were digested into single-cell suspensions. Cells were washed, resuspended in FACS buffer, and used as antibodies against surface antigen staining for 30 min at 4 °C with FITC anti-mouse CD3 (Cat. 100203, BioLegend, San Diego, CA), PE anti-mouse CD4 (Cat. 100407, BioLegend, San Diego, CA), and PE anti-mouse CD8 (Cat. 100707, BioLegend, San Diego, CA). Cells were then fixed and permeabilized, stained for perforin (Cat. 154303, BioLegend, San Diego, CA) and granzyme B (Cat. 396413, BioLegend, San Diego, CA), and analyzed by flow cytometry.
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