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7 protocols using dgu 20a3r degasser

1

Analysis of Phenolic Compounds by LC-MS/MS

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Dry filtrates were diluted to 1000 mg/L and filtered with a 0.2 µm microfiber filter prior to LC-MS/MS analysis [31 (link)]. LC-MS/MS analyses of the phenolic compounds were performed using a Nexera model Shimadzu UHPLC coupled to a tandem MS instrument (Shimadzu, Kyoto, Japan). The liquid chromatography was equipped with LC-30AD binary pumps (Shimadzu, Kyoto, Japan), a DGU-20A3R degasser (Shimadzu, Kyoto, Japan), a CTO-10ASvp column oven (Shimadzu, Kyoto, Japan), and a SIL-30AC auto sampler (Shimadzu, Kyoto, Japan). The chromatographic separation was performed on a C18 reversed-phase Inertsil ODS-4 (150 mm × 4.6 mm, 3 µm, GL Sciences, Tokyo, Japan) analytical column. The column temperature was fixed at 40 °C. The elution gradient consisted of mobile phase A (water, 5 mM ammonium formate and 0.1% formic acid) and mobile phase B (methanol, 5 mM ammonium formate, and 0.1% formic acid). The gradient program with the following proportions of solvent B was applied t (min), B%: (0, 40), (20, 90), (23.99, 90), (24, 40), (29, 40). The solvent flow rate was maintained at 0.5 mL/min and injection volume was set as 4 µL.
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2

Quantifying Lutein and β-Carotene by HPLC

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Chromatographic analysis (HPLC) of lutein and β-carotene was performed using a Shimadzu system, consisting of an LC-20AD XR binary pump system, SIL-20AC XR autosampler, CTO-20AC column oven, and DGU-20A 3R degasser (Shimadzu, Kyoto, Japan), equipped with a DiscoVery BIO Wide Pore C18-5 column (Thermo Electron, Dreieich, Germany, 15 cm × 4.6 mm, 5 μm) and a PDA detector (SPD-M20A). The used solvents were: (A) methanol: 1 M ammonium acetate 8:2 and (B) methanol: acetone 8:2. The injection volume was 20 µL and the flow rate 1 mL/min. UV absorbance was settled at 450 nm. The gradient for elution was linear from 0 to 100% B in 20 min; after 5 min, 100% of A was used for a further 5 min. Finally, a linear flow of 100% A for 5 min was used to equilibrate the column. The content of lutein and beta-carotene was measured and quantified using different concentrations of the standard sample of the two carotenoids (concentration range was from 0.01 to 1 mg/mL for both lutein and beta-carotene).
Standards were purchased from Fluka Analytical.
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3

Quantifying Cocaine and Metabolites in Blood

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Blood samples (40-75 μl) were collected from a saphenous vein into a heparin-treated capillary tube at various time-points after the (−)-cocaine administration (n=4 for each gender), and mixed immediately with 100 μl of 25 μM paraoxon (in 0.1% formic acid). Blood samples were stored at −80°C until analysis by using our previously developed LC-MS/MS method (22 (link)) for simultaneously detecting the concentrations of (−)-cocaine and metabolites in blood samples. Briefly, the LC-MS/MS method includes a one-step solid phase extraction used to extract all of the compounds (cocaine and its metabolites) from blood samples (22 (link)). A Shimadzu HPLC system (Shimadzu, Kyoto, Japan), consisting of a DGU-20A/3R degasser, LC-20AD binary pumps, CBM-20A controller, and SIL-20A/HT auto sampler, was used. The chromatographic analysis was carried out on an Atlantis T3 (100Å, 3 μm, 2.1 mm X 150 mm I.D) column (Waters, Milford, MA). The mass spectrometer, AB SCIEX tripleTOF™ 5600 (AB SCIEX, Redwood City, CA), was run in positive ion and high sensitivity mode under the following conditions and settings: positive ions were generated in the source using nitrogen as the source gases.
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4

HPLC Analysis of Flavonoid Compounds

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The components of PC were determined through an HPLC system, 10AD liquid chromatograph, DGU-20A3R degasser (LC-SHIMADZU, Kyoto, Japan). Reverse-phase chromatographic analysis was carried out in isocratic conditions using a shim-pack CLC column (SHIMADZU), (CLC-ODS(M), 250 × 4.6 mm internal diameter, particle size 5 µm, at 26°C. Running conditions included: injection volume 20 µl; mobile phase for naringenin and genistein, phosphate buffer (pH 7): acetonitrile (70:30), detection at 280 nm; for sakuranetin, methanol: water (6:4);(9 (link)) flow rate, 1 ml/min and the chromatogram monitored at 280.0 nm.(10 ) The chromatographic peaks of the analytes were confirmed by comparing their retention time and UV spectra with those of the reference Std. The naringenin, genistein and sakuranetin (1 to 100 µg/ml) Std solutions were injected into the HPLC and peak height responses obtained. Std graphs were prepared by plotting conc vs peak height. Quantification was carried out from integrated peak height of the samples using the corresponding Std graph.
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5

Analysis of Plant Extracts via HPLC-MS

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Acetonic extracts (100 μg/ml) of plants were filtered through a 0.45 μm membrane filter before injection into the HPLC system. LC-ESI-MS analysis was performed using a LCMS-2020 quadrupole mass spectrometer (Shimadzu, Kyoto, Japan) equipped with an electrospray ionization source (ESI) and operated in negative ionization mode. The temperature of quadrupole was DL: 275°C, heat block: 450°C. Mass spectrometer was coupled online with an ultra-fast liquid chromatography system that consisted of a LC-20AD XR binary pump system, SIL-20AC XR autosampler, CTO-20AC column oven and DGU-20A 3R degasser (Shimadzu, Kyoto, Japan). A DiscoVery BIO Wide Pore C18-5 (Thermo Electron, Dreieich, Germany) (15 cm x 4.6 mm, 5 μm) was applied for analysis. The mobile phase was composed of A (0.1% formic acid in H2O, v/v) and B (0.1% formic acid in methanol, v/v) with a linear gradient elution: 0–14 min, 10% B; 14–24, 20% B, 27–37, 55% B, 37–45, 100% B, 45–50, 10% B. Re-equilibration duration was 5 minutes between individual runs. The flow rate of the mobile phase was 0.4 ml/min, the column temperature was maintained at 40°C and the injection volume was 5 μl. Spectra were monitored in mode SIM (Selected Ion Monitoring) and processed using Shimadzu LabSolutions LC-MS software.
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6

ORBI Quantification by Stability-Indicating HPLC

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ORBI quantification in the solubility test was performed by a stability-indicating method with high performance liquid chromatography as described by Casedey and collaborators [48 (link)]. The chromatographic separation was achieved using a Prominence model Shimadzu™ liquid chromatograph (Kyoto, Japan) with a DGU-20A 3R degasser, SIL-20AC HT autosampler, CTO-20A oven, LC-20AD pump, and SPD-M20A diode array detector. The following chromatographic parameters were used. A Shim-pack CLC-ODS Shimadzu column (Kyoto, Japan) (dimensions 250 mm × 4.6 mm diameter and 5.0 µm particle size) at 25 °C was the stationary phase. The mobile phase used was a solution of 5% (v/v) acetic acid:methanol (80:20 v/v) at a flow rate of 0.7 mL·min1. UV detection was performed at a wavelength of 290 nm, and the injection volume of the sample in the chromatographic system was 20 μL.
A calibration curve was prepared using a stock solution in the mobile phase of ORBI Sigma standard (previously dried for 4 h at 105 °C in an oven) at 5 concentrations in triplicate (5, 10, 15, 20, and 30 µg·mL1). The results were analysed by linear regression of the peak area versus concentration. The regression equation for the calibration curve was y = 134.377x − 3751 with a correlation coefficient of (r) = 0.9999.
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7

HPLC Determination of Serine and Glutamate Enantiomers

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The simultaneous determination of d- and l-enantiomers of serine and glutamate in samples was accomplished using high-performance liquid chromatography (HPLC) as previously described [21 (link)]. Briefly, the HPLC system consisted of DGU-20A3R degasser (Shimadzu, Kyoto, Japan), LC-20AD pump (Shimadzu, Kyoto, Japan), CTO-20AC column oven (Shimadzu, Kyoto, Japan), FP-4020 fluorescence detector (Jasco, Tokyo, Japan), and M510S auto-sampling injector (Eicom, Kyoto, Japan). d-Serine was identified based on retention time and a well-resolved peak and further confirmed by loss of the peak due to degradation by addition of DAO (2–5 units for tissue, plasma, saliva; 1 unit for dialysate).
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