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4 protocols using anti bdnf

1

Western Blot Validation of DPYSL2 and BDNF Expression

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Western blot (WB) was performed in order to validate peculiar increase of expression of both DPYSL2 and BDNF found in hill with respect to plain and Control samples with 2-DE and RT-PCR, respectively. Aliquots of protein samples (5 μg for DPYSL2 and 50 μg for BDNF) were mixed with Laemmli solution, run in 4–15% polyacrylamide gels (Mini-PROTEAN® Precast Gels, Biorad, Hercules, CA, USA) using a mini-Protean Tetracell (Biorad, Hercules, CA, USA) and transferred onto nitrocellulose membranes (0.2 μm) using a Trans-Blot Turbo transfer system (Biorad) as previously described [45 (link)]. Anti-DPYSL2 (Cell Signaling Technology, Beverly, MA, USA) and anti-BDNF (Genetex, Irvine, CA, USA) antibodies were used at 1:1000 dilution. Moreover, an anti-β-actin (Merck KGaA, Darmstadt, Germany), was used for internal normalization. HRP-goat anti-rabbit secondary antibody was used at 1:10,000 dilution. Immunoblots were developed using the enhanced chemiluminescence detection system (ECL). The chemiluminescent images were acquired using LAS4010 (GE Health Care Europe, Upsala, Sweden). The immunoreactive specific bands were quantified using Image Quant-L software.
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2

Western Blot Analysis of Neurological Markers

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Western blot analyses were performed as follows. Protein samples obtained from brain or placenta tissue homogenates were separated on 8%–12% sodium dodecyl sulfate‐polyacrylamide gels, transferred to Immobilon‐P membranes (Millipore), and probed overnight at 4°C with primary antibodies including anti‐BDNF (1:1000; GTX132621), anti‐GDNF (1:1000; GTX17447), and anti‐VEGF (1:1000; GTX102643) from GeneTex (Irvine, CA, USA); anti‐pCaMKII (1:1000; #12716), anti‐total CaMKII (1:1000; #11945), anti‐pAkt S473 (1:1000; #9271), anti‐pAktT308 (1:1000; #4056), anti‐total Akt (1:1000; #9272), anti‐pERK (1:1000; #9101), and anti‐total ERK (1:1000; #9102) from Cell Signaling; anti‐PlGF (1:1000; ab196666), anti‐glucose transporter (GLUT) 3 (ab41525), anti‐GLUT1 (ab115730), anti‐SLC38A1 (ab134268), anti‐SNAT2 (ab90677), and anti‐SLC38A4 (ab58785) from Abcam; and anti‐β‐actin (1:10000; A5441, Sigma‐Aldrich). Afterward, the membranes were washed and incubated with anti‐rabbit or anti‐mouse horseradish peroxidase‐linked secondary antibodies (1:5000; Santa Cruz Biotechnology, Santa Cruz, CA, USA) at 4°C for 1 h. The relative intensity of protein signals was normalized to the corresponding β‐actin intensity and was quantified by densitometric analysis with the use of ImageJ 1.50i software (National Institutes of Health, Bethesda, MD, USA).
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3

Western Blot Analysis of Synaptic Proteins

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Mouse brains were dissected on ice and then homogenized in a solubilization buffer containing 20 mM HEPES (pH:7.4), 1 mM EDTA, 1 mM PMSF, 250 mM sucrose, and protease inhibitor cocktail using a polytron at the lowest speed. The homogenates were centrifuged 20 min at 100,000 × g at 4°C. Supernatants were resupended in 20 mM HEPES (pH: 7.4), 1 mM EDTA and stored at −20°C until further use. Solubilized proteins were loaded at 50 μg in SDS buffer, separated on 10% SDS PAGE gels and then transferred to a nitrocellulose membrane.
Membranes were incubated with rabbit polyclonal Anti-BDNF (1:1000) (GeneTex, United States), Anti-Phospho(Tyr705)TrkB (1:500), Anti-TrkB (1:1000) (Signalway Antibody, United States), Anti-K2P2.1 (TREK-1) (1:500) and anti-ProBDNF (1:400) (Alomone Labs, Israel), Anti-Furin (1:1000) (SantaCruz Technologies, United States), Anti-Phospho(Ser133) CREB (1:500) and mouse monoclonal Anti-CREB (1:1000) (CST, United States), mouse monoclonal Anti-beta-Actin (1:5000) (SantaCruz Technologies, United States) over night at 4°C. Afterwards, membranes were incubed 30 min with secondary antibody (related to species of first antibody) coupled HRP. Protein bands were revealed, images were acquired with FX Fusion (Vilber) and analyzed with ImageJ (US NIH, Bethesda, MD, United States) (Schneider et al., 2012 (link)).
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4

Western Blot Analysis of Hedgehog and BDNF Signaling

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Proteins were extracted from the ipsilateral T4-5 spinal cord dorsal horn (SDH), and the supernatant protein concentrations were detected with the BCA protein assay kit (Abcam). The equal number of sample proteins was separated on sodium dodecyl sulphate–polyacrylamide gels. Subsequently, they were transferred onto the polyvinylidene fluoride membrane, which was blocked with 5% non-fat milk and then incubated with primary antibodies overnight at 4°C. The primary antibodies included anti-Shh (1:2000, GeneTex, San Antonio, USA), anti-Ptch1 (1:1000, Sigma, St. Louis, USA), anti-Smo (1:2000, Abcam), anti-Gli1 (1:2000, Abcam), anti-BDNF (1:1000, GeneTex), anti-p-TrkB (1:1000, GeneTex), anti-TrkB (1:2000, GeneTex), anti-p-PI3K (1:1000, GeneTex), anti-p-Akt (1:1000, GeneTex), anti-Histone H3 (1:2000, GeneTex), and anti-GAPDH (1:10,000, GeneTex). Finally, the membranes were rinsed and the proteins were detected with the enhanced chemiluminescence method.
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