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12 protocols using suprapure nitric acid

1

ICP-MS Analysis of Arsenic in Plants

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The plant samples (obtained from both the soil and solution culture experiments) were digested by a microwave digester using concentrated (65%) suprapure nitric acid (Merck KGaA, Germany) (microwave-assisted digestion) [27 (link)]. The arsenic in the digest was determined by ICP-MS (PerkinElmer NexION 300). SRM 1573a (tomato leaves) from NIST was used to validate the ICP-MS results. The average recovery percentage was 95.3 ± 4.01% for As.
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2

Trace Element Analysis Protocol

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Suprapure nitric acid (65%) from Merck (Darmstadt, Germany) was used to digest the samples. Ultrapure water (18.2MΩ cm resistivity at 25 °C) was obtained from a water purification system Milli Q (Millipore, Germany). Certified multi-element standard solutions (39 K, 24 Mg, 44Ca, 27Al, 137Ba, 57Fe, 23Na, 88Sr, 55Mn, 66Zn, 65Cu, 85Rb, 61Ni, 53Cr, 51 V, 7Li, 208Pb, 59Co, 75As, 133Cs, 71 Ga, 77Se, 205Tl, 114Cd, 238U, 107Ag, 4Be) was purchased from Inorganic Ventures (USA). Mercury(202Hg) mono-elemental standard solution was purchased from Institute of Metrology, China.
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3

Analytical Calibration Curve Preparation for Trace Elements

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A multi-element TraceCERT® standard solution for ICP (Fluka Analytical, Sigma Aldrich) containing Ba (at 40 mg/L), Fe and Zn (both at 100 mg/L) and mono-element TraceCERT® certified standards for AAS of Ca, K, Mg, Na and P (1000 mg/L in nitric acid), purchased from Sigma Aldrich, were used to prepare an analytical calibration curve with six standard solutions (by dilution in 50 and 100 mL polymethylpentene volumetric flasks) plus a blank consisting of ultrapure water (18.2 MΩ cm resistivity at 25 °C) obtained with a water purification system MilliQ (Millipore, Germany). Hydrogen peroxide solution (≥ 30% w/w) for ultra-trace analysis from Sigma-Aldrich (St. Louis, MO, USA) and suprapure nitric acid (65% w/w) from Merck KGaA (Darmstadt, Germany) were used to digest the samples.
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4

Lead Quantification in Mouse Brain Regions

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Pb2+ levels were evaluated in different brain regions, hippocampus, striatum, cortex and cerebellum of mice (23 PND) of both groups by graphite furnace atomic absorption spectrophotometry. Tissue samples were weighted and 65% suprapure nitric acid (Merck, Mexico) (1:10, w/v) was added, then the tissue was digested in a shaking water bath at 60 °C for 30 min. Afterwards, the samples were diluted (1:10 or 1:20, v/v) with deionized water. Samples were injected into an atomic absorption spectrophotometer (Model 3110; Perkin-Elmer, Norwalk, CT, USA) equipped with graphite furnace (HGA-600) and auto-sampler (AJS60) adjusted to a wavelength of 283.3 nm. Quality control standards and calibration curves (of known amounts of Pb2+ standard) were used for each analysis. Results were expressed as µg of lead for mg of tissue55 (link).
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5

Quantification of Thiols and Oxidants

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l-Hcy-thiolactone·HCl, d,l-Hcy, l-methionine, N-acetyl-l-cysteine (NAC), horse spleen ferritin, dithiothreitol (DTT), tris-(2-carboxyethyl)phosphine (TCEP), o-phthaldialdehyde (OPA), monosodium phosphate, NaOH, sodium citrate, NaCl, CuCl2, FeCl2, FeCl3, vitamin C, sodium dodecyl sulfate (SDS), chloroform, methanol, HCl, trichloroacetic acid, were purchased from Sigma-Aldrich. Suprapure nitric acid, 65% and perchloric acid, 60% were from Merck. Reagents were prepared in MiliQ purified water.
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6

Lignocellulosic Biomass Characterization

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All used chemicals were of analytical reagent grade. Acetic acid, dichloromethane, sulfuric acid (98%), sodium hydroxide, methanol, hydrochloric acid, suprapure nitric acid 65%, ethanol, toluene, acetone, hydrogen peroxide 30%, glucose, mannose, galactose, arabinose, pyridine, hydroxylamine hydrochloride (NH2OH·HCl) and salicin were purchased from Merck (Darmstadt, Germany). Sodium chlorite (80%) was purchased from Alfa Aesar GmbH & Co (Karlsruhe, Germany). Enzymes cellulase from Trichoderma reesei ATCC 26921, β-glucosidase from almonds, S. cerevisiae YSC2, peptone, BSTFA, 5-hydroxymethylfurfural and furfural were purchased from Sigma-Aldrich (St. Louis, MO, USA). Trichoderma reesei ATCC 26921 is a lyophilized powder with concentration ≥1.0 unit per mg of solid. All solutions were prepared by using ultrapure water (18.2 MΩcm−1 at 20 °C) obtained from a Direct-Q3 UV Water Purification System (Millipore, Molsheim, France).
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7

Quantitative Analysis of Homocysteine

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L-Hcy-thiolactone·HCl, D,L-Hcy, horse spleen ferritin, dithiothreitol (DTT), o-phthaldialdehyde (OPA), sodium dodecyl sulfate (SDS), HCl, and trichloroacetic acid were purchased from Sigma-Aldrich. Suprapure nitric acid (65%) and perchloric acid (60%) were from Merck. Reagents were prepared in Milli-Q purified water.
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8

Trace Metal Analysis in Blood Serum

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The suprapure nitric acid, nitric acid, acetic acid, percholoric acid, hydrocholoric acid, sodium hydroxide, oxalic acid, pure lead of 1000 ppm, mercury and potassium chloride were purchased from Merck Chemical Company (pro-analysis grade) (Darmstadt, Germany). All chemicals and reagents were analytical grade and used without further purification. All experiments were carried out at room temperature. We also used repeated dilutions with deionized double distilled water to prepare low concentration solutions.
Blood serum samples preparation 10 mL of blood sample was taken for the subjects. 2 mL of the sample together with 2 mL of suprapure concentrated nitric acid were transferred into a cleaned test tube, and then 2 mL of HClO 4 was added. The resulting solution was heated to nearly boiling point and the appearance of yellow color. Then 2 mL of nitric acid was added to the solution and heated upto a boiling point for ten minutes, and then on the residual ash, 2 mL of HCL was added and evaporated until nearly dryness. The acidity of the solution was neutralized with 2 M NaOH (pH = 4.6). The final sample (2 mL) was transferred into a 10 mL volumetric flask and diluted with 8 mL deionized double distilled water. To protect of the lead, 5 ml of sodium oxalate (1 mM) buffer was added to the final sample (totally 15 mL) which was ready for injection into the voltammetry cell [21] .
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9

Chromium Bioremediation by B2-DHA Strain

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The capacity of B2-DHA strain to decrease the chromium contents in the liquid medium was determined by the inductively coupled plasma atomic emission spectroscopy (ICP-AES). [27] The strain B2-DHA was grown in 50 mL LB medium supplemented with 100 µg/mL of chromium and incubated at 37°C with shaking at 180 rpm for five days. The B2-DHA cells grown similarly but without potassium chromate were used as controls. Five sets of experiments were performed with three replicates along with controls. The cell free medium was collected by centrifugation (10000 rpm for 10 min) using a Sorvall rotor (Sorvall Super T21, USA). The cell free broth was filtered through 0.2 μm filter and acidified to pH 2.0 with 30% suprapure nitric acid (Merck, Germany). The acidified cell free broth was analyzed for total chromium content by using ICP-AES. [27]
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10

Chromium Bioaccumulation in B2-DHA Strain

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The bioaccumulation of chromium was determined in the B2-DHA strain grown in 50 mL LB medium supplemented with 100 µg/mL of chromium and incubated at 37°C for five days.
After incubation, samples were collected and centrifuged at 10000 rpm for 10 min at Sorvall rotor (Sorvall Super T21, USA). The pellet was washed with 0.9 % saline twice and air-dried until a constant dry weight was achieved. The entire contents of the flask were harvested and the dry weight of the cells was recorded. Cells were digested with 30% suprapure nitric acid (Merck, Germany) according to ratio of 7.5 mL nitric acid per g dry biomass using microwave digestion. The samples were brought to a constant volume prior to determination of chromium contents. Measurement of chromium was also carried out similarly in the control experiments using media containing chromium but not exposed to B2-DHA and in media devoid of chromium but treated with B2-DHA. All analyses were carried out after filtration of the cell digest through 0.2 μm filter. The chromium present in the dried pellets was determined by the inductively coupled plasma mass spectroscopy (ICP -MS). [38]
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