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6 protocols using anti cd11b fitc

1

Flow Cytometric Analysis of Murine Blood Leukocytes

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Whole blood underwent red blood cell lysis (BD PharmLyseTM). Cells were washed and resuspended in PBS containing 0.5% bovine serum albumin (BSA) (Sigma-Aldrich) and 2 mM ethylenediamine tetra-acetate (EDTA) (Sigma-Aldrich). Fc receptors were blocked with a CD16/32 FcR Blocking Reagent (Miltenyi Biotec, 130-092-575) for 10 minutes at 4°C. Samples were then incubated with anti-CD45-VioBlue (Miltenyi Biotec, 130-110-802) [27 ], anti-CD11b-FITC (Miltenyi Biotec, 130-081-201) [28 ], anti-Ly6G-PE (Miltenyi Biotec, 130-107-913) [29 ], and anti-Ly6C-APC (eBioscience, 17-5932-82) [30 ] for 10 minutes at 4°C, according to the manufacturer’s protocol. Stained cells were washed in PBS containing 0.5% BSA and 2 mM EDTA. Samples were analyzed by flow cytometry (CytoFLEX S, Beckman Coulter). Leukocytes were identified based on typical light scatter properties, with further gating to define CD45+ leukocytes, CD45+CD11b+ myeloid cells, CD45+CD11b+Ly6G-Ly6Chi inflammatory monocytes, CD45+CD11b+Ly6G-Ly6Clow reparative monocytes, CD45+CD11b+Ly6GhiLy6Chi neutrophils. Data were scaled to cells/mL of blood.
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2

Detailed Leukocyte Profiling Protocol

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Heparinized whole venous blood underwent erythrocyte lysis (Pharmalyse, BD Biosciences) before the isolation of peripheral blood mononuclear cells (PBMCs) by centrifugation. After washing and resuspending PBMCs in PBS with 0.5% BSA and 2 mM EDTA, cells were incubated at 4°C with CD16/32 Fc block (130-092-575, Miltenyi Biotec) for 10 min. Anti-CD45-VioBlue (130-110-802, Miltenyi Biotec), anti-CD11b-FITC (130-081-201, Miltenyi Biotec), anti-Ly6G-PE (130-107-913, Miltenyi Biotec), and Ly6C-APC (17-5932-82, eBioscience) was added for a further 10 min before washing to remove unbound antibodies. Gating thresholds were determined with unstained, singly stained, and fluorescence minus one controls. Flow cytometry (Fortessa, BD Biosciences) was performed to acquire leukocytes based on typical light scatter properties, with further gating used to define the following subsets: 1) CD45+; total leukocytes; 2) CD45+CD11b+; myeloid cells; 3) CD45+CD11b+Ly6C+Ly6G; monocytes; 4) CD45+CD11b+Ly6C+Ly6G+; neutrophils; 5) CD11b+Ly6Chi−Ly6C; “inflammatory” monocytes; and 6) CD11b+Ly6Clo−Ly6G “reparative” monocytes. All populations are expressed as cells/mL of blood (32 (link), 33 (link)).
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3

Isolation and Purification of Astrocytes and Microglia

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2 to 3 weeks after preparation cortical cultures were trypsinized and suspended into culture medium, washed with phosphate-buffered saline (PBS) and re-suspended in 0.5% BSA in PBS buffer. Cells were incubated at 4°C for 10 min with anti-GLAST-PE (1:10, Miltenyi Biotec) and anti-CD11b-FITC (1:10, Miltenyi Biotec) in 0.5% BSA in PBS, and afterwards washed with 0.5% (w/v) bovine serum albumin (BSA, Sigma) in PBS, and loaded directly into the FACS (MoFlo, Beckman Coulter). 100 GLAST-positive CD11b-negative astrocytes or 50 GLAST-negative CD11b-positive microglial cells were sorted per RNase-free PCR tube. For RNA sequencing and microarray transcriptome analysis all cells from a culture flask were sorted in one vial. The tubes were immediately placed into liquid nitrogen and transferred to a −80°C freezer until further use.
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4

Isolation and Analysis of Stem Cell Markers

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Cells from subconfluent monolayer cultures were suspended in phosphate-buffered saline (PBS) and incubated with monoclonal anti-human ALCAM-phycoerythrin (PE) (R&D Systems, Minneapolis, MN), anti-human CD24-fluorescein isothiocyanate (FITC) (eBioscience Inc, San Diego, CA), anti-human CD44-FITC (MBL, Nagoya, Japan), and monoclonal anti-human CD133-FITC (Ancell Corp, Bayport, MN) antibodies. Mouse immunoglobulin G1 K isotype Control PE (eBioscience Inc) was used as a negative control. Mouse IgG1 K isotype Control PE and anti-CD11b-FITC (Miltenyi Biotec) were used to exclude mouse cells from analyses. Labeled cells were analyzed by a flow cytometer (EC800; Sony Biotechnology, Tokyo, Japan). For cell separation, we incubated magnetic microbeads conjugated with anti-PE reagent (Miltenyi Biotec) with labeled cells for 15 minutes at 4°C. Labeled cells were isolated by passing the suspension through an AutoMACS PRO separator (Miltenyi Biotec). Unlabeled cells were negatively selected and collected by the depletion method through the AutoMACS PRO separator.
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5

Isolation and Flow Cytometric Analysis of Fetal Brain Cells

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Brains from 22- to 26-week-old animals were homogenized using a 5-ml Glass Tissue Grinder (A. Hartenstein). The homogenized solution was mixed with 100 % Percoll solution (GE healthcare) to a final 70 % Percoll solution and layered under a 30 % Percoll solution. After 30 min centrifugation at 500g without brake at RT, the cells were isolated from the 30–70 % layer and washed with PBS. Per staining, 100 000 cells were used. The staining was performed in FACS-PBS (PBS, 2 % FCS, 5 mM EDTA) in the presence of the FcBlocker (Miltenyi Biotec) using the following fluorescently labeled antibodies: anti-CD4-PE, anti-CD8-APC, anti-CD11b-FITC, and anti-CD45-APC (all from Miltenyi Biotec), for 15 min at RT in the dark. Samples were analyzed using a Gallios flow cytometer (Beckman Coulter). Thirty thousand events were recorded. Flow cytometry data were analyzed using the FlowJo 8.5.3 software (FlowJo, LLC). For viability testing, the Fixable Viability Dye eFluor® 780 (eBioscience) was used according to the manufacturer’s instructions. The gating of the living cell population was performed based on the live staining; dead cell populations were excluded. The total cell number was determined utilizing bead measurement (Beckman Coulter CC Size Standard L10), and the absolute cell numbers were calculated according to the manufacturer’s instructions.
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6

Characterization of Tumor-Immune Landscape

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In order to characterize the phenotype of splenocytes (SPC) and tumor-infiltrating immune cells, single-cell suspensions were derived from the spleens and from lungs of wt tumor-bearing and K-rasG12D-vaccinated mice, as described in [73 (link)]. Cells were treated with Fc receptor blocker (BD Biosciences) and then stained for 30 min at 4 °C with the following antibodies: anti-CD45-VioGreen, anti-CD3-FITC, anti-CD4-APC/Vio770, anti-CD8-VioBlue, anti-CD49b-PE, anti-TCRγδ-PE/Vio770, anti-PD1-APC, anti-CD11b-FITC, anti-F4/80-PE/Vio770, anti-Ly6C-APC/Vio770, anti-Ly6G-VioBlue, anti-MHCII-APC (Miltenyi Biotec Bergisch Gladbach, Germany), anti-CD206-PE, and anti-CD69-PE/Vio770 (Biolegend, San Diego, CA, USA). Labeled samples were acquired on a BD FACSVerse and analyzed using FlowJO10.5.3 software.
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