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Cyanine 5.5 cy5.5

Manufactured by Lumiprobe
Sourced in United States

Cyanine 5.5 (Cy5.5) is a fluorescent dye commonly used in biological research applications. It has an excitation maximum at 675 nm and an emission maximum at 694 nm, making it suitable for detection in the near-infrared region of the spectrum.

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5 protocols using cyanine 5.5 cy5.5

1

Comprehensive Molecular Cloning Protocol

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TVB-3166 (catalog no.: SML1694), 2-bromohexadecanoic acid (catalog no.: 238422), EDTA-free protease inhibitor (catalog no.: 1183617001), Tris(2-carboxyethyl)phosphine (catalog no.: C4706), and tert-butanol (catalog no.: 471712) were purchased from Millipore-Sigma (Oakville, Canada). Phusion polymerase, XhoI and NheI FastDigest restriction enzymes, T4 DNA ligase, dithiobissuccinimidyl propionate (DSP), Protein G Sepharose, Lipofectamine 3000, RNAiMAX, Eagle's MEM (EMEM), and SuperSignal West Pico were purchased from Thermo Fisher Scientific (Mississauga, Canada). DMEM, Temin’s modified Eagle's medium (catalog no.: 11935046), FBS, charcoal-stripped FBS, and trypsin/EDTA were obtained from Wisent Bio Products (St. Bruno, Canada). Triton X-100, DMSO, and CuSO4 were from BioShop Canada, Inc (Burlington, Canada), alkynyl-palmitate (Click Chemistry Tools, Scottsdale, AZ), cyanine 5.5 (Cy5.5) (tetramethylindo)(di)-carbocyanines; Cyanine-azide (Lumiprobe, Hunt Valley, MD), Site Counter (Badrilla, Leeds, UK), and paraformaldehyde (PFA) (Electron Microscope Science, Hatfield, PA).
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2

Fluorescent Dendrimer Synthesis and Purification

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G4-90/10 was synthesized as previously described [28 (link)]. The dendrimers were labeled with fluorescein isothiocyanate (FITC; Sigma Aldrich, St. Louis, MO, USA; G4-90/10-FITC) or Cyanine 5.5 (Cy5.5; Lumiprobe, Hunt Valley, MD, USA; G4-90/10-Cy5.5) as previously described [28 (link)]. Briefly, the conjugates were purified by dialysis using 3 KDa molecular weight cut-off (MWCO) membranes (Spectrum Labs, Rancho Dominguez, CA, USA) against three changes of 0.9% sodium chloride, followed by deionized water overnight, after which they were lyophilized. The dendrimers were resuspended at the desired concentration in phosphate buffered saline (PBS; pH 7.4) or Hank’s balanced saline solution (HBSS; Gibco, Waltham, MA, USA) for both in vitro and in vivo applications.
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3

Synthesis and Characterization of Fluorescent Dye Conjugates

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Tert-butanol (t-BuOH), dimethyl sulfoxide (DMSO), diethyl ether, ethyl acetate, acetone, methanol (MeOH), dimethylacetamide (DMA), 2,2′-azobis(isobutyronitrile) (AIBN), 2,2′-azobis(4-methoxy-2,4-dimethylvaleronitrile) (V70), acetic acid (CH3COOH), dexamethasone (DEX), 4-(2-oxopropyl)benzoic acid (OPB), N-(3 dimethylaminopropyl)-N′-ethylcarboiimide hydrochloride (EDC), 4-(dimethylamino)pyridine (DMAP), dimethylformamide (DMF), dichloromethane (DCM), and porcine liver esterase were obtained from Merck KGaA (Darmstadt, Germany). The fluorescent dyes cyanine 5.5-succinimidyl ester (Cy5.5-NHS ester) and cyanine 5.5 (Cy 5.5) were obtained from Lumiprobe GmbH, (Hannover, Germany). Milli-Q water (H2O) was used for all experiments and obtained from the appliance Millipore Merck, Darmstadt, Germany.(resistivity 18.2 MΩ·cm, 25 °C, organic carbon ≤ 5 ppb). dexamethasone (2 mg/mL of excipient QSP) used in in vivo experiments was purchased from Vibrac S.A. (Carros, France) and 3-aminophthalhydrazide monosodium salt was obtained from Thermo Fisher GmbH (München, Germany). Complete Freund’s adjuvant (CFA) was obtained from Becton, Dickinson and Company, Franklin Lakes, NJ, USA.
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4

Functionalized Hyaluronic Acid for Cell Targeting

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Sodium hyaluronate (HA) with a molecular weight (MW) of 100 kDa was purchased from Lifecore Co. (Chaska, MN, USA). 1-Ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC), N-hydroxysulfosuccinimide (sulfo-NHS), diaminohexane (DAH) and dimethyl sulfoxide (DMSO) were purchased from Sigma Aldrich (St. Louis, MO, USA). Methyltetrazine (Tz)-PEG-NH2 and trans-cyclooctene (TCO)–PEG–NH2 were purchased from Click Chemistry Tools (Scottsdale, AZ, USA). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS), penicillin and phosphate-buffered saline (PBS) were purchased from Invitrogen Co. (Carlsbad, CA, USA). Cyanine 5.5 (Cy5.5) and fluorescein isothiocyanate (FITC) dye were obtained from Lumiprobe Co. (Hunt Valley, MD, USA).
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5

CD47 mAb Tumor Targeting in TNBC

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When TNBC tumor volume reached ~100 mm3, 50 µg of Cyanine 5.5 (Cy5.5, Lumiprobe, Hunt Valley, MD, USA) labelled anti-CD47 mAb or 1.5 nmole Cy5.5 (control, similar amount as labelled Cy5.5 in mAb) was intravenously (i.v.) administrated via tail vein for TNBC-targeting analysis. Mice were imaged at 24 h post mAb injection under IVIS Lumina Series III (PerkinElmer, Waltham, MA, USA) with a wavelength of 660 nm/710 nm (excitation/emission) and exposure time of 10 s. Inhalation anesthesia was induced by delivering 3.5–4.5% isoflurane in oxygen to mice via the respiratory system (nose cone), then maintained with a concentration of 1–2% during imaging procedure.
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