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7 protocols using avicularin

1

Analysis of Phytochemical Compounds from Various Sources

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The following substances and solvents were used in the study: procyanidins B1, B2, C1, A1, A2, A4, (+)-catechin, (–)-epicatechin, quercetin, quercitrin (quercetin-3-O-rhamnoside), isoquercitrin (quercetin-3-O-glucoside), avicularin (quercetin-3-O-arabinofuranoside), guaiaverin (quercetin-3-O-arabinopyranoside), rutin (quercetin-3-O-rutinose), reynoutrin (quercetin-3-O-xyloside), kaempferol, nicotiflorin (kaempferol-3-O-rutinoside), afzelin (kaempferol-3-O-rhamnoside), astragalin (kaempferol-3-O-glucoside), chlorogenic acid (3-O-caffeoylquinic acid), neochlorogenic acid (5-O-caffeoylquinic acid), cryptochlorogenic acid (4-O-caffeoylquinic acid), p-coumaric acid, arbutin, hydroquinone, α-amyrin, β-amyrin, β-sitosterol, lupeol, erythrodiol, maslinic acid, oleanolic acid, acetonitrile, acetone, and methanol, which were purchased from Sigma–Aldrich (Steinheim, Germany); hyperoside (quercetin-3-O-galactoside), procyanidin B3, uvaol, friedelin, 6″-O-acetylisoquercitrin (quercetin-3-O-(6″-acetylglucoside)), betulin, and betulinic and corosolic acids from Extrasynthese (Genay, France); ursolic acid from Carl Roth (Karlsruhe, Germany); and trifluoroacetic acid from Merck (Darmstadt, Germany). All used chemicals were of HPLC grade. Ultrapure water used in this study was prepared with Milli–Q® 180 (Millipore, Bedford, MA, USA) water purification system.
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2

Analytical Characterization of Plant Extracts

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All the solvents, reagents, and standards used were of analytical grade. The following substances were used in the study: Ethanol 96% (v/v) (AB Strumbras, Kaunas, Lithuania), procyanidin C1, procyanidin B2, quercetin, hyperoside, avicularin, quercitrin, kaempherol 3-O-glucoside, luteolin 7-O-glucoside, phloridzin, formic acid, acetonitrile, (+)-catechin, (-)-epicatechin, rutin, isoquercitrin, chlorogenic acid, p-coumaric acid, caffeic acid, hydrochloric acid, Hoechst33342, propidium iodide, glucose, temozolomide, DMSO and KCl (Sigma-Aldrich, Steinheim, Germany), Dulbecco’s Modified Eagle Medium (DMEM) with Glutamax, foetal bovine serum, penicillin-streptomycin, Versene solution, antibiotic-antimycotic solution (Anti-Anti) were of Gibco brand and purchased from Thermo Fisher Scientific, Waltham, MA, USA. During the study, we used purified de-ionized water prepared with the Milli–Q® (Millipore, Bedford, MA, USA) water purification system.
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3

HPLC-MS Analysis of Crabapple Leaf Compounds

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Crabapple leaf samples (approximately 0.8–1.0 g fresh weight) were subjected to extraction with 10 mL extraction solution (methanol: water: formic acid: trifluoroacetic acid= 70: 27: 2: 1)58 (link) at 4 °C in the dark for 72 h, shaking every 6 h. The supernatant was isolated by filtration through filter paper and a further filtration through a 0.22 μm MilliporeTM filter (Billerica, MA, USA). For the HPLC analysis, trifluoroacetic acid: formic acid: water (0.1: 2: 97.9) was used as mobile phase A and trifluoroacetic acid: formic acid: acetonitrile: water (0.1: 2: 48: 49.9) was used as mobile phase B. The gradients used were as follows: 0 min, 30% B; 10 min, 40% B; 50 min, 55% B; 70 min, 60% B; 30 min, 80% B. Detection was performed at 520 nm for anthocyanin and 350 nm for flavonol58 (link), respectively. All samples were analyzed in three biological triplicates (extracted from three different batches of leaves).
In this study, we employed HPLC-ESI (±)-MS2 analysis to identify the kinds of compounds by standards and comparing their spectroscopic data to literature59 60 (link). Cyanidin-3-O-glucoside, quercetin-3-O-glucoside, avicularin, phloridzin, quercetin (Sigma-Aldrich, Germany), Procyanidin B2 (Sigma-Aldrich, UK) was used as standards.
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4

Extraction and Characterization of St. John's Wort Compounds

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St. John’s wort dry extract (European Pharmacopoeia, EP, Reference Standard 01131, code: Y0001050, batch: 2.0), avicularin and guaiaverin were obtained from Sigma-Aldrich Inc. while rutin (L10815B002) from Adooq Bioscience. Hypericin primary reference standard (batch HWI 01814-1) was purchased from HWI ANALITIK GmbH.
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5

Analytical Characterization of Phytochemicals

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All the solvents, reagents, and standards used were of analytical grade. The following substances were used in the study: ethanol 96% (v/v) (AB “Vilniaus degtinė”, Vilnius, Lithuania), 4-(dimethylamino)cinnamaldehyde (99% purity), acetic acid (99.8% purity) (“Scharlau”, Sentmenat, Spain), procyanidin A2 (99% purity), procyanidin C1 (90% purity), quercetin (95% purity), quinic acid (98% purity), hyperoside (97% purity), isorhamnetin-3-O-rutinoside (95% purity), avicularin (90% purity), formic acid (97.5–98.5% purity), acetonitrile (99.9% purity), (+)-catechin (98% purity), rutin (95% purity), isoquercitrin (90% purity), chlorogenic acid (95% purity), and hydrochloric acid (37% purity) (Sigma-Aldrich, Steinheim, Germany). During the study, we used purified de-ionized water prepared with the “Milli–Q®” (“Millipore”, Bedford, MA, USA) water purification system.
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6

ER Stress Pathway Modulators in Diabetes

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Avicularin (purity > 99%) and lead acetate were purchased from Sigma Chemical Co. (St. Louis, MO, USA). The anti-p-IRE1, anti-PERK, anti-p-eIF2α, anti-GRP78, anti-PYG, anti-GK, anti-PEPCK, anti-G6PC, anti-TNF-α, anti-IL-1β and anti-β-actin antibodies were provided by Abcam (Cambridge, MA, USA and Santa Cruz Biotechnology, CA, USA) [5 (link)].
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7

Analytical Standards for Phytochemical Analysis

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The solvents used in the research were analytical grade acetonitrile, MS grade formic acid, and MS grade trifluoracetic acid from Merck (Darmstadt, Germany), acetonitrile from Sigma-Aldrich (Steinheim, Germany), and 96.0% ethanol from AB Vilniaus Degtine (Vilnius, Lithuania). The ultrapure water was purified by Milli–Q® (Millipore, Bedford, MA, USA) water purification system.
Standard substances of neochlorogenic acid (5-O-caffeoylquinic acid), chlorogenic acid (3-O-caffeoylquinic acid), (+)-catechin, cryptochlorogenic acid (4-O-caffeoylquinic acid), (–)-epicatechin, procyanidins A1, A2, B1, and B2, p-coumaric acid, isoquercitrin (quercetin-3-O-glucoside), guaiaverin (quercetin-3-O-arabinopyranoside), avicularin (quercetin-3-O-arabinofuranoside), quercitrin (quercetin-3-O-rhamnoside), afzelin (kaempferol-3-O-rhamnoside), taurine, 17 amino acid mix solution, quercetin, and kaempferol were purchased from Sigma-Aldrich; hyperoside (quercetin-3-O-galactoside), cyanidin-3-O-galactoside, and cyanidin-3-O-arabinoside were obtained from Extrasynthese (Genay, France).
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