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17 protocols using flk 1

1

Endothelial Cell Angiogenesis Assay

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Netrin-1 (#1109-N1) was purchased from R&D Systems (Minneapolis, MN). Antibodies of proliferating cell nuclear antigen (PCNA/#sc-56) and Flk-1 (#sc-19530) were purchased from Santa Cruz (Dallas, TX). CD34 antibody (#ab8158) and GFP antibody (#ab290) were obtained from Abcam (Cambridge, MA), and Alexa Fluor 594 conjugate- Isolectin GS-IB4 antibody (#I21413) was purchased from Life Technologies (Carlsbad, CA). CD133 antibody (#orb10288) was obtained from Biorbyt (San Francisco, CA). P38 MAPK inhibitor SB202190 (#559388) and JNK inhibitor SP600125 (#420119) were purchased from EMD Millipore (Germany). ERK1/2 inhibitor U0126 (#U120), cGMP antagonist Rp-8-Br-PET-cGMPs (#B6684), NO scavenger 2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide (PTIO), anti-von Willebrand Factor (vWF) antibody (#F3520), and anti-actin antibody (#A2066) were all purchased from Sigma. Antibody for p38 MAPK (#506123) was obtained from Calbiochem. Antibodies for phospho-p38 MAPK (#9211), alpha-Tublin (#2125), eNOS (#9586), and phospho-eNOS (Ser1179) (#9571) were all purchased from Cell Signaling Technology (Danvers, MA). Goat anti-rabbit IgG-HRP conjugate (#172–1019) was obtained from Bio-Rad (Irvine, CA). Other chemicals were obtained from Sigma in the highest purity.
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2

Immunofluorescence Staining of Cell Cultures

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Cells were grown on four-well plastic dishes. After incubation, the cells were washed twice with PBS and then fixed with 4 % paraformaldehyde in PBS for 30 min at room temperature. The cells were washed again with PBS and then permeabilized for 30 min in PBS containing 0.2 % Triton. Next, the cells were blocked in PBS containing 10 % goat serum and incubated for 1 h with CD90, CD31, vascular endothelial growth factor (VEGF) receptor 1 (Flk-1), β-catenin (Santa Cruz Biotechnology, 1:200), and acetylated α-tubulin (Abcam, Cambridge, MA, USA, 1:200). The cells were washed again three times for 10 min with PBS and incubated with a FITC (fluorescein isothiocyanate)-conjugated secondary antibody (Jackson ImmunoResearch Laboratories, Inc., West Grove, PA, USA, 1:500) for 1 h. Finally, the cells were treated with DAPI (4′,6-diamidino-2-phenylindole) (Sigma-Aldrich) to stain nuclei for 2 min and then mounted on slides. Photographs of the cells were acquired by using an immunofluorescence microscope (Carl Zeiss, Oberkochen, Germany, LSM700). All images were acquired by using an excitation filter with a reflected light fluorescence microscope and transferred to a computer equipped with ZEN software (Carl Zeiss).
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3

Immunohistochemical Analysis of Angiogenic Factors

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Formalin-fixed, paraffin-embedded serial sections were dewaxed, rehydrated, and subjected to heat-induced epitope retrieval using Target Retrieval Solutions, Citrate pH 6 or Tris/EDTA pH 9 (Dako, Agilent Technologies, Santa Clara, CA, USA), in an electric pressure-cooker for 20 min at 120 °C. To quench endogenous peroxidase activity, slides were incubated in 3% (v/v) hydrogen peroxide in methanol for 25 min. Nonspecific binding was blocked using 10% (v/v) fetal bovine serum in phosphate-buffered saline containing 0.1% Triton X100 for 1 h. Sections were incubated at 4 °C overnight with anti-human THPO (Antibodies-Online GmbH, Aachen, Germany), VEGF-A (Santa Cruz Biotech., Dallas, TX, USA), or Flt-1 (Santa Cruz Biotech.) rabbit polyclonal antibodies, or anti-human THPOR (R&D Systems, Minneapolis, MN, USA) or Flk-1 (Santa Cruz Biotech.) mouse monoclonal antibodies, or anti-human HIF-1α (Abcam, Cambridge, UK) rabbit monoclonal antibody. Negative controls were performed with nonimmune serum instead of the primary antibody. The slides were then stained with ImmPRESS Reagent (Vector Laboratories, Burlingame, CA, USA) for 30 min, revealed using the ImmPACT DAB Peroxidase Substrate Kit (Vector Laboratories), and counterstained with Mayer’s hematoxylin.
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4

Muscle Protein Expression Analysis

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Frozen muscle tissue (~5–10 mg; 1:40, w/v) was homogenized as described before (Ballak et al. 2015 (link)). Homogenates were centrifuged at 10,000 g for 10 min at 4 °C. The supernatant was immediately stored at −80 °C and the protein concentration was measured using the DC protein assay kid (Bio-Rad Laboratories, Nazareth, Belgium). Forty micrograms of protein was separated by SDS-PAGE (10–12 % gels) and transferred to PVDF membranes. Membranes were blocked with 5 % nonfat milk for 1 h and then incubated overnight (4 °C) with the following antibodies: SDH (1:10,000, Santa Cruz, UK), cytochrome c oxidase subunit 4 (COX-4) (1:1000, Abcam, Cambridge, UK), Flk-1 (1:500, Santa Cruz, UK), and eukaryotic elongation factor 2 (eEF2) (1:1000, Cell Signaling Technology, Leiden, The Netherlands). Horseradish peroxidase-conjugated anti-mouse (1:10,000) or anti-rabbit (1:5000) secondary antibodies (Sigma-Aldrich, Bornem, Belgium) were used for chemiluminescent detection. Membranes were scanned and quantified with Genetools and Genesnap software (Syngene, Cambridge, UK), respectively. Preliminary experiments showed that eEF2 content was stable across the different treatments and conditions, and results are presented as the ratio protein of interest/eEF2.
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5

Immunoblot Analysis of Stem Cell Markers

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After treatment, cells were harvested at the indicated times in lysis buffer (20 mmol/liter Tris (pH 7.5), 150 mmol/liter NaCl, 2 mmol/liter EDTA, 10% glycerol, 1% Triton X-100, 1 mmol/liter phenylmethylsulfonyl fluoride, and protease inhibitor cocktail (Sigma)). Protein concentrations were determined via BCA (Pierce, Rockford, IL), and proteins were resolved on 12% sodium dodecyl sulfate- (SDS-) polyacrylamide gels followed by electrophoretic transfer onto nitrocellulose membranes. The membranes were blocked with 5% nonfat dry milk in Tris-buffered saline, 0.1% Tween 20, for 2 h and incubated at 4°C overnight with primary antibodies against TIAR (C-18) (1 : 500), Flk-1 (1 : 1000), Sox17 (1 : 500), VE-cadherin (1 : 1000), and c-myc (1 : 1000) (Santa Cruz Biotechnology, Santa Cruz, CA), nestin (1 : 500, Chemicon, Temecula, CA), and TIA-1 (1 : 500, Proteintech Group). Following incubation with appropriate horseradish peroxidase-conjugated secondary antibodies, signals were detected with an enhanced chemiluminescence system (Amersham Biosciences, Piscataway, NJ).
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6

Immunohistochemical Analysis of Fetal Lung

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Formalin fixed E18.5 lungs were paraffin embedded and sectioned according to standard procedures. Paraffin sections were stained using antibodies specific to FOXF1 (Malin et al., 2007 (link)), FLK1 (Santa Cruz Biotechnology, Dallas, TX, USA), proSPC (Ustiyan et al., 2012 (link)) and α-SMA (Abcam) as described (Ustiyan et al., 2009 (link); Wang et al., 2010 (link)).
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7

Quantifying VEGF, FLK1, and GAPDH Protein Levels

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The protein expression levels of VEGF, FLK1, and GAPDH in the femoral head tissues obtained from rats in different groups were detected by western blot analysis. The protocol and semiquantitative analysis were carried out following the protocol of our previous study [26 (link)]. The following antibodies were used: VEGF antibody (rabbit antibody, dilution 1 : 50, Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), FLK1 (rabbit antibody, dilution 1 : 50, Santa Cruz), and GAPDH antibody (internal control, rabbit polyclonal antibody, dilution 1 : 200, Santa Cruz).
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8

Renal Expression of Angiogenic Factors

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Standard blotting protocols were followed, as described9 (link), 18 (link), 43 , to determine renal expression of pro-angiogenic hypoxia-induced factor (HIF)-1α, VEGF (Santa Cruz, CA, 1:200), hepatocyte growth factor (HGF; Abcam, Cambridge, UK, 1:200), the specific VEGF and HGF receptors Flk-1 (Santa Cruz, CA, 1:200 for all) and cMet (Abbiotec, San Diego, CA, 1:200), total and phosphorylated (p)-eNOS (Cell Signaling, 1:500, Danvers, MA, 1:500), ERK ½ and akt (Santa Cruz, CA, 1:200).
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9

Immunoblotting Analysis of P2 Receptor Expression

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The process was carried out in accordance with our previous study [21 (link)]. The anti-eNOS, PECAM-1, Flk-1, calponin, smooth muscle actin, transgelin-2, P2X1, P2X3, P2X5, P2X7, P2Y1, P2Y2, P2Y4, P2Y6, P2Y11 and P2Y14 antibodies were purchased from Santa Cruz Biotechnology. Protein extracts from the cell lines HMEC-1, C2 and MG-63 cells were applied as positive controls for the Western blot. Protein density was analyzed by Image J software (ImageJ 1.50i, Wayne Rasband National Institutes of Health, Bethesda, .MD USA) for P2 expression after differentiation.
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10

Immunostaining of Aortic Microvessels

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Aortic rings extending microvessels were fixed with 4% formalin, permeabilised with 0.25% Triton-X for 15 min and incubated in PBS (+) containing 10% goat serum for 1 h at room temperature to block non-specific binding.After being rinsed with PBS (+) for 5 min they were then incubated overnight with primary antibody diluted in PBLEC29 (link). After rinsing with PBS (+) (3 × 10 min), samples were then incubated for 30 min at 37 °C in a cocktail of Alexa Fluor (488, 555, or Cy5) conjugated with appropriate secondary antibodies in PBLEC. Samples were rinsed then incubated (1 min) with Hoechst33342 and mounted using Fluoromount (Diagnostic BioSystems). Images were recorded using a fluorescence microscope (OlympusX70 or Keyence BZ-9000). The following primary antibodies were used: laminin (Progen 10765), CD31 (BD Pharmingen 550274), Reck [RECK-F, polyclonal rabbit antibodies (Matsuzaki et al., in preparation) and 5B11D1212 (link)]; α-Sma (DAKO MO85), fibronectin (BD Biosciences, 610078), PDGFR-beta (Santa Cruz Biotechnology sc-432), Flk-1 (Santa Cruz Biotechnology sc-625), LAMA5 (Sigma-Aldrich SAB4501720) and Ki67 (Leica Biosystems NCL-Ki67p).
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