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10 protocols using ab231227

1

Quantitative Western Blot Analysis

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Western blotting analysis was performed using antibodies against the following: PDGFR-β (1:1000, ab32570, Abcam), NG-2 (1:1000, ab129051, Abcam), VE-cadherin (1:1000, ab231227, Abcam), ZO-1 (1:1000, ab190085, Abcam), p-MLC20 (1:2000, M6068, Sigma), MLC20 (1:2000, 3672, Cell Signaling Technology, Danvers, MA, USA), Sphk2 (1:2000, PA5-99,720, Thermo Fisher Scientific, Waltham, MA, USA), S1PR1 (1:2000, ab11424, Abcam), S1PR2 (1:2000, PA5-72,868, Thermo Fisher Scientific), and β-actin (1:7000, A5441, Sigma). Bands were detected with fluorescent secondary antibodies and quantified using the Odyssey CLx Infrared Imaging System (LI-COR, Lincoln, NE, USA).
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2

Protein Expression Analysis in Wound Tissue

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After excessive anesthesia in rats leading to death, the tissue of wound was collected. Total protein was extracted, and after the determination of its concentration by bicinchoninic acid (BCA) assay (Pierce, Rockford, IL, USA), the protein was treated with 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) separation as well as transferred onto a nitrocellulose membrane. Src (ab133283, ABCAM, USA,1 : 2000), VE-cadherin (ab231227, ABCAM, USA,1 : 5000), Ang1 (ab133425, ABCAM, USA,1 : 5000), Tie-2 (19157-1-AP, Proteintech, USA,1 : 5000), and β-actin (ab8226, ABCAM, USA,1 : 5000) antibodies were added for incubation overnight at 4 °C. Then came the indoor cultivation (1 h) with the corresponding II antibodies. Enhanced chemiluminescence (Thermo Fisher Scientific, Waltham, MA, USA) was carried out, and Fluor Chem 2.0 image analyzer was applied to analyze.
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3

Western Blot Analysis of Protein Expression

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Total proteins were extracted from rPAECs with different treatments by using RIPA regents (Beyotime). After quantification by the BCA kit (Beyotime), the equal amounts of proteins were separated by 10% SDS-PAGE and subsequently moved onto the PVDF membrane (Millipore, USA). Next, the membrane was blocked utilizing nonfat milk (5%) for 1 h. The primary antibodies against METTL3 (ab195352, Abcam, Cambridge, MA, USA), TRPC6 (PA5-95049, Invitrogen), CD31 (PA5-32321, Invitrogen), VE-cadherin (ab231227, Abcam), α-SMA (14-9760-82, Invitrogen), vimentin (ab92547, Abcam), NFATc1 (MA5-32686, Invitrogen), NFATc2 (MA5-32661, Invitrogen), NFATc3 (PA5-79734, Invitrogen), NFATc4 (PA5-105650, Invitrogen), and GAPDH (ab8245, Abcam) were incubated with the membrane at 4°C. On the next day, the secondary antibody (ab150165, Abcam) was added to the membrane for another 2 h. Afterwards, the protein bands were developed by using the ECL kit (Thermo Fisher Scientific, Waltham, MA, USA). Finally, the intensity of the bands was measured using ImageJ software.
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4

Protein Expression Analysis of Cardiac Tissue

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Heart tissue or cells were lysed with radioimmunoprecipitation (RIPA) lysis buffer. The prepared protein sample was separated through 10% SDS‐PAGE and then transferred to PVDF membrane (Millipore). 5% fat‐free milk was used for 1‐hour blocking at room temperature. The membrane was subsequently incubated with primary antibodies overnight at 4°C. The following day secondary antibodies were used for 1‐hour incubation at room temperature before the enhanced chemiluminescence (Millipore) with Amersham Imager 680 (General Electric Company). Primary antibodies included those against CD31 (Abcam, ab28364; Novus, NB100‐2284), VE‐cadherin (Abcam, ab231227; ab33168), α‐SMA (Abcam, ab5694), Vimentin (CST, #5741), collagen I (Abcam, ab34710), collagen III (Abcam, ab7778), Phospho‐AMPKα (Thr172) (CST, #2535), AMPKα (CST, #5831), Smad4 (CST, #38454), TGF‐β (Santa Cruz, sc130348), NOX4 (Proteintech, 14347‐1‐AP) and GAPDH (Proteintech, 10494‐1‐AP).
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5

Immunohistochemical Analysis of Lung Tissue

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Lung tissue specimens were embedded in paraffin and sliced 2–4 μm thick. The sections were dewaxed, rehydrated, immersed in 0.01 M citrate buffer (pH 6.0), and boiled in a pressure cooker for 2 min. The sections were blocked with 3% hydrogen peroxide for 10 min and then incubated overnight at 4°C with rabbit monoclonal antibody against ZO-1 (1:400; catalog no. ab221547, Abcam, UK) or rabbit polyclonal antibody against VE-cadherin (1:100; catalog no. ab231227, Abcam). The sections were exposed to bio-goat antirabbit IgG as a secondary antibody from an SP (mouse/rabbit IgG)-POD kit (Catalog no. SP0041, Solarbio Life Sciences) following the manufacturer's instructions. Then, the sections were stained with DAB from the SP (mouse/rabbit IgG)-POD kit. Normal rabbit IgG (1:100, catalog no. AB-105-C, R&D) in PBS was used instead of a primary antibody (ZO-1 or VE-cadherin) in the immunohistochemistry procedure as a negative control. Spleen and kidney tissues instead of lung tissue were used for ZO-1 and VE-cadherin IHC as a positive control.
Expression of ZO-1 and VE-cadherin was visualized by a light microscope (EVOS FL AutoLife Technologies) and quantified from six randomly selected fields of view using Image-Pro-Plus 6. The integrated optical density (IOD) was measured from areas of protein staining, and the ratio of IOD area was used in statistical analysis.
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6

Protein Expression Analysis in Lung Tissue

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The total protein in the lung tissue was extracted with cell lysis buffer and measured using a BCA protein assay kit, and the proteins were resolved using SDS–polyacrylamide gel electrophoresis. Electrophoresis of proteins was followed by transfer to PVDF membrane. The membrane was incubated with primary antibodies against Bax (ab32503, Abcam, China; 1 : 1000), Bcl-2 (ab32124, Abcam, China; 1 : 1000), cleaved caspase-3 (ab32042, Abcam, China; 1 : 1000), SDC-1 (ab128936, Abcam, China; 1 : 1000), claudin-5 (ab131259, Abcam, China; 1 : 1000), ZO-1 (ab190085, Abcam, China; 1 : 1000), and VE-cadherin (ab231227, Abcam, China; 1 : 1000) at 4°C overnight, followed by 1 hour at room temperature with the secondary antibody. The protein bands were identified using an enhanced detection chemiluminescence (ECL) technique.
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7

Quantitative Protein Expression Analysis in Tissues

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Briefly, total proteins were extracted from 60 mg of liver and lung tissues using a total protein extraction kit suitable for animal-cultured cells and tissues (Epizyme Biotech, PC201, China). The concentration of the extracted proteins was determined by the BCA method (Thermo, SF247582, USA). These denatured proteins were then separated on 7.5% SDS-PAGE (Epizyme Biotech, PG211, China) and transferred onto polyvinylidene fluoride membranes for subsequent analysis. After blocking non-specific binding sites with BSA, the membranes were incubated overnight at 4°C with primary antibodies targeted against α-SMA (1:1,000, ab7817, Abcam), collagen-I (1:1,000, bs-10423R, Bioss), vWF (1:1,000, ab6994, Abcam), VE-cadherin (1:1,000, ab231227, Abcam), iNOS (1:1,000, 22226-1-AP, Proteintech), PGC1 (ab191838, Abcam), and PFKFB3 (ab181861, Abcam). Following incubation, the membranes were washed with TBST containing 0.1% Tween-20 and incubated with an HRP-conjugated secondary antibody goat anti-rabbit (Beyotime, A0208, Biotechnology, China) at a 1:1,000 dilution for 1 h at room temperature. After three washes with TBST, the immunoreactive bands were visualized using an ECL chemiluminescent kit (Thermo, XF345252, USA), providing a robust method for protein expression analysis.
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8

Protein Expression Analysis in Lung Tissues

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Protein was isolated from the right lower lobe of lung tissues using a RIPA buffer (Beyotime, China) obeying the protocol of the manufacturer. Protein was then separated on 10% SDS-PAGE, transferred onto PVDF members (Millipore, USA), blocked with 5% nonfat milk, and probed with primary antibodies, such as PLCε-1 (ab109501, Abcam, USA), TLR4 (#14358, Cell Signaling Technology, USA), RelA (p65, #3039, Cell Signaling Technology, USA), caspase 3 (#9662, Cell Signaling Technology, USA), Bcl-2 (ab194583, Abcam, USA), Bax (ab32503, Abcam, USA), MLCK (ab76092, Abcam, USA), VE-cadherin (ab231227, Abcam, USA), occludin (ab216327, Abcam, USA), ZO-1 (ab191143, Abcam, USA), and GAPDH (ab8245, Abcam, USA) at 4°C overnight, respectively. Subsequently, the members were incubated with the secondary antibody goat anti-rabbit IgG HRP (ab6721, Abcam, USA) at room temperature for 1 h. Finally, the bands were visualized using an enhanced chemiluminescent agent (Bio-Rad, USA). The levels of protein were normalized using GAPDH.
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9

Immunohistochemical Analysis of Lung Tissue

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The lung tissue sections were routinely dewaxed and hydrated; Claudin-5 antibody (1:200; ab131259; Abcam), ZO-1 antibody (1:300; ab96587; Abcam), and VE cadherin antibodies (1:300; ab231227; Abcam) were incubated overnight at 4°C and negative controls were incubated with PBS. Sections were covered with 3,3'-diaminobenzidine (DAB) tetrahydroxychloride and counterstained with hematoxylin. Under light microscopy, the tissue was dark brown for protein positive expression, and no staining or staining was negative or weakly positive. The average optical density (AOD) of the positive expression was analyzed by IPP software = integrated optical density (IOD)/positive expression area.
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10

Kidney Protein Analysis by Western Blot

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The left kidney obtained from each group was frozen in liquid nitrogen and stored at -80°C. Protein extraction from tissue samples was performed using the RIPA Lysis Buffer (R0010; Solarbio) and Protease and Phosphatase Inhibitor Cocktail (P002, NCM). In brief, protein samples were electrophoresed on 4-12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis polyacrylamide gels and then transferred to a PVDF membrane (Merck Millipore, Darmstadt, Germany). The membranes were blocked with 5% BSA in TBST and incubated with the specific primary antibodies ([VE-cadherin Rabbit mAb, ab231227; Abcam]; LC3II [E5Q2K] Mouse mAb [#83506, CST]), TNF-α (ab205587; Abcam), IL-6 (ab259341; Abcam), and IL-1β (ab254360; Abcam) overnight at 4°C. The dilution of VE-cadherin antibody was 5 µg/mL, and dilution of the antibodies including lC3II, TNF-α, IL-6, and IL-1β was 1:1,000. Mouse Anti-βeta actin mAb (TA-09) was used as an internal reference, and the dilution was 1:1,000. The membranes were washed with TBST and then incubated with the secondary antibody (goat anti-rabbit IgG [H + L] HRP, [111-035-003; Jackson Immuno-Research]), and the dilution of the secondary antibody was 1:10,000. The membranes were scanned with the Odyssey detection system (Li-COR, Lincoln, NE, USA). Densitometric analysis was performed using ImageJ software (National Institutes of Health, Bethesda, MD, USA).
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