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Axograph software

Manufactured by Molecular Devices
Sourced in United States

AxoGraph is a software application designed for the acquisition, analysis, and visualization of electrophysiological data. It provides a comprehensive suite of tools for researchers to record, process, and interpret data from various electrophysiological techniques.

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7 protocols using axograph software

1

Suspended Buccal Mass Preparation for Aplysia

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The methods used for the suspended buccal mass are described in McManus et al. (2012 ). Briefly, animals from 250 g to 350 g in weight were anesthetized by injecting 50 % of the animal’s mass of isotonic magnesium chloride into the hemocoel. The buccal mass and attached buccal and cerebral ganglia were then dissected out and placed in Aplysia saline (460 mM NaCl, 10 mM KCl, 22 mM MgCl 2, 33 mM MgSO 4, 10 mM CaCl 2, 10 mM glucose, 10 mM MOPS, pH 7.4 - 7.5). Hook electrodes were attached to the I2 muscle, RN, BN2, BN3, and branch a of BN2 (BN2a). The buccal mass was then suspended via sutures through the soft tissue at the rostral edge and the two ganglia pinned out behind it, with the cerebral ganglia placed in a separate chamber isolated from the main chamber using vacuum grease. To elicit ingestive patterns, the Aplysia saline in the chamber containing the cerebral ganglion was changed to a solution of 10 mM carbachol (Acros Organics) in Aplysia saline. Electrical recordings were made using an A-M Systems model 1700 amplifier with a 10-500 Hz band-pass filter for EMG and a 300-500 Hz bandpass filter for the ENG recordings, and they were captured using a Digidata 1300 digitizer and AxoGraph software (Axon Instruments).
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2

Whole-Cell Patch-Clamp Recording of Transfected Hippocampal Neurons

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Transfected hippocampal pyramidal neurons were targeted for whole-cell patch-clamp recording with borosilicate electrodes (3–6 MΩ) at room temperature in normal ACSF containing 100 μM picrotoxin, 100 μM D,L-APV, and 1 μM TTX as described previously (Anggono et al., 2011 (link)). The electrode internal solution contained (in mM): 130 cesium methanesulfonate, 10 HEPES, 0.5 EGTA, 8 CsCl,5 TEA-Cl, 1 QX-314, 10 Naphosphocreatine, 0.5 Na-GTP, and 4 Mg-ATP. Data were acquired with a Multiclamp 700A amplifier (Molecular Devices) at 4 KHz and analyzed using Axograph software (Axon Instruments). Events having amplitudes of >2.5 rms noise were averaged, and kinetic measurements were performed using a monoexponential decay function.
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3

Isolated Ganglia Preparation for Ingestive Patterns

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The methods used for the isolated ganglia are described in Lu et al. (2013 ). Briefly, the animal was euthanized and the buccal mass and buccal and cerebral ganglia dissected out as described for the suspended buccal mass. The ganglia were then dissected away from the buccal mass along with a small strip of I2 attached to the I2 nerve, and the ganglia was pinned out in a two-chambered dish lined with Sylgard 184 (Dow Corning), with a vacuum grease seal separating the solution in the chamber with the cerebral ganglion from that in the chamber with the buccal ganglion. Suction electrodes were attached to BN2, BN3, RN, and the excised strip of the I2 muscle. For ingestive patterns, a 10 mM carbachol solution was applied to the chamber containing the cerebral ganglion. Electrical recordings were made using an A-M Systems model 1700 amplifier with a 10-500 Hz band-pass filter for EMG and a 300-500 Hz bandpass filter for the ENG recordings, and they were captured using a Digidata 1300 digitizer and AxoGraph software (Axon Instruments).
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4

Cardiomyocyte Calcium Dynamics Measurement

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Isolated cardiomyocytes were impaled with double-barreled Ca2+-selective microelectrodes for the determination [Ca2+]d, and the potentials were recorded via a high-impedance amplifier (WPI 773 electrometer, FL, United States) as described previously (Lopez et al., 2000 (link); Lopez et al., 2017 (link)). The potential from the 3M KCl microelectrode barrel (Vm) was subtracted electronically from the potential recorded by the Ca2+ ion-selective barrel (VCaE) to produce a differential Ca2+-specific potential (VDiffCa), which represent the cardiomyocyte [Ca2+]d. Vm and VDiffCa potentials were acquired at a frequency of 1,000 Hz with AxoGraph software (version 4.6; Axon Instruments, CA, United States) and stored in a computer for further analysis. The following criteria were used to accept individual cardiomyocytes [Ca2+]d measurements from control and db/db mice: 1) a quick drop to a steady level of Vm; 2) a stable recording potential (Vm and VDiffCa) for no less than 60 s; 3) a quick return to baseline of Vm and VDiffCa potential on the exit of the microelectrodes from the cell. These criteria were not met in 15% of the total impalements carried out in control and 25% in db/db cardiomyocytes, and these data were rejected from our analysis.
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5

Calibrating Ca2+ Microelectrodes for Precise Measurements

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Double-barreled Ca2+-selective microelectrodes were prepared from thin-walled borosilicate with 1.2 and 1.5 mm outside diameter (OD) (PB150F-4, World Precision Instruments, Sarasota, FL, USA). The ion-selective barrel (1.5-mm OD) was silanized with dimethyldichlorosilane vapor and then backfilled with the Ca2+ ionophore II (ETH 129) Sigma-Aldrich in Saint Louis, MO, USA. The remaining portion of the ion-selective barrel was backfilled with pCa7, as previously described in [10 (link)]. The resting membrane potential (RMP) barrel (1.2-mm OD) was backfilled with 3 M KCl before the measurements. The RPM- and Ca2+-specific potentials were acquired at a frequency of 1000 Hz using AxoGraph software (version 4.6; Axon Instruments, San Jose, CA, USA), then and stored on a computer for further analysis. Before and after each measurement, individual calibration of the Ca2+-selective microelectrodes was performed by following the previously described protocol [10 (link)]. If the calibration curves obtained before and after the measurement differed by more than 3 mV, the data from that microelectrode were excluded from further analysis [10 (link)].
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6

Fabrication of Ca2+ Selective Microelectrodes

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Double-barreled, Ca2+ selective microelectrodes were prepared from thin-walled 1.2 and 1.5 mm outside diameter (OD) borosilicate HCl-washed glass capillaries (PB150F-4, World Precision Instruments, FL, United States). The tip of the ion-selective barrel (1.5 mm OD) was silanized with dimethyldichlorosilane vapor and then filled with Ca2+ ionophore II (ETH 129, Sigma-Aldrich, MO, United States); the remainder of the barrel was filled with pCa7 (Eltit et al., 2013 (link)). The membrane potential barrel (1.2 mm OD) was filled with 3 M KCl. The double-barreled Ca2+ microelectrode was mounted on a modified plastic holder containing Ag/AgCl wires, which was attached to a head stage (input impedance >1011Ω), connected to a Duo 773 electrometer (World Precision Instruments, FL, United States). The Vm and Ca2+ specific potentials were acquired at a frequency of 1,000 Hz with the AxoGraph software (version 4.6; Axon Instruments, CA, United States) and stored on a computer for further analysis. Each Ca2+ selective microelectrode was individually calibrated before and after measurements, as previously described, and if the two calibration curves did not agree within 3 mV, the data from that microelectrode were discarded (Lopez et al., 1983 (link); Eltit et al., 2013 (link)).
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7

Whole-Cell Patch-Clamp Recording of Transfected Hippocampal Neurons

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Transfected hippocampal pyramidal neurons were targeted for whole-cell patch-clamp recording with borosilicate electrodes (3–6 MΩ) at room temperature in normal ACSF containing 100 μM picrotoxin, 100 μM D,L-APV, and 1 μM TTX as described previously (Anggono et al., 2011 (link)). The electrode internal solution contained (in mM): 130 cesium methanesulfonate, 10 HEPES, 0.5 EGTA, 8 CsCl,5 TEA-Cl, 1 QX-314, 10 Naphosphocreatine, 0.5 Na-GTP, and 4 Mg-ATP. Data were acquired with a Multiclamp 700A amplifier (Molecular Devices) at 4 KHz and analyzed using Axograph software (Axon Instruments). Events having amplitudes of >2.5 rms noise were averaged, and kinetic measurements were performed using a monoexponential decay function.
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