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98 protocols using muller hinton agar

1

EGCG Extraction and Characterization

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EGCG, with more than 98% purity, was kindly provided by Prof. Masami Suganuma at Saitama University (Saitama, Japan). It was extracted from Japanese green tea leaves (Camellia sinensis L., O. Kuntze, Theaceae) that were cultured at the Saitama Prefectural Tea Institute in Saitama Prefecture, Japan, as described previously [19 (link),51 (link)]. Mueller Hinton Broth (MHB) and Muller Hinton Agar (MHA) were purchased from HiMedia (Mumbai, Maharashtra, India). Rh123, Triton X-100, Glutaraldehyde, and Osmium tetroxide (OsO4) were obtained from Sigma Aldrich (St Louis, MO, USA). Resazurin AR (ALPHA CHEMIKA, Mumbai, Maharashtra, India), Tetracycline hydrochloride (PanReac AppliChem, Barcelona, Spain), NPN (TCI, Tokyo, Japan), Bio-Rad DC Protein Assay kit, and bovine serum albumin (BSA) (Bio-Rad Laboratories, Hercules, CA, USA) were used for the experiments.
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2

Antibacterial and Antifungal Screening of Algae

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The sample of algae was collected from Lake in Udaipur. The chemicals used in the BG-11 medium were obtained from Hi-Media and Sigma-Aldrich. The following items were also obtained like Agar–agar from Hi-Media, Antibiotics (Penicillin G, Chloramphenicol, and Streptomycin sulphate) from Hi-Media, Silver nitrate from Merck, Muller-Hinton Agar (MHA) from Hi-Media, Potato Dextrose Agar from Hi-Media, and Methyl blue (MB) from LOBA Chemie. The Microbial Research Laboratory, Department of Botany at Mohanlal Sukhadia University, Udaipur, Rajasthan, India, provided several strains for evaluating the antibacterial and antifungal properties. These strains include Staphylococcus aureus, Bacillus subtilis, Proteus vulgaris, Klebsiella pneumoniae, Fusarium sp., and Curvularia sp.
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3

Synthesis of Curcuminoids-LDH Complex

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The rhizomes of Curcuma longa were purchased from an Ayurvedic Pharmacy, Navinna, Sri Lanka. All chemicals used for the synthesis of curcuminoids‐LDH were of analytical grade and procured from Research Lab Fine Chem Industries and Lobachemie Chemicals.
Brain Heart Infusion Broth (BHI) [Oxoid, UK], Nutrient agar [HiMedia, India], and Muller Hinton agar (MHA) [HiMedia, India] were the bacteriological culture media used for the experiments. Phosphate buffered saline (PBS) was used to wash harvested bacterial cells. Working solution concentrations were made by diluting a stock surfactant solution using sterile distilled water.
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4

Antimicrobial Efficacy of Castor Oil

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Castor oil (Amman Pharmaceutical industries CO, Jordan), activated charcoal (Research-Lab fine Chem industries, Mumbai, India), loperamide (Daehwa Pharmaceuticals, Republic of Korea), distilled water (Dallul Pharmaceuticals PLC, Addis Ababa, Ethiopia), methanol (Alpha Chemika, Mumbai, India), ciprofloxacin 5 μg/disc (Becton, Dickinson and Company, Sparks, USA), ceftazidime 30 μg/disc (Oxoid Ltd., Basingstoke, England), muller hinton agar (MHA) (HiMedia Laboratories Pvt. Ltd., India), muller hinton broth (MHB) (HiMedia Laboratories Pvt. Ltd., India) and nutrient agar (Micro master lab, India) were used during the study.
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5

Synthesis and Characterization of Fullerenes and AgNPs

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The chemicals used in the current experiments were: Fullerenes (C60) and AgNPs were procured commercially from Sigma-Aldrich (St. Louis, MO, USA) of 99.99 % purity grade with no further purifications. The solvent used in this study was double-distilled water. The other chemicals, such as Muller Hinton Agar (MHA) and Potato Dextrose Agar (PDA) media, were purchased from Hi-Media. Moreover, DPPH, streptomycin sulfate, benzyl antibiotics, and doxorubicin were purchased from Sigma Aldrich. The cell line media such as Dulbecco’s Modified Eagle’s Medium (DMEM), Trypsin-EDTA and Fetal Bovine Serum (FBS) were purchased from GIBCOTM (Grand Island, NY, USA).
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6

Antibiotic Susceptibility Testing Protocol

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The bacterial isolate’s antibiotic sensitivity was assessed using a standard disc diffusion test following the CLSI guidelines [99 ,100 ]. To begin the assay, a bacterial starter culture was raised overnight from a single colony in NB at 28 °C and 200 rpm. The culture was then spread-plated on Muller Hinton agar (MHA; Himedia, Mumbai, India). After approximately 30 min of inoculum soaking, susceptibility discs containing various antibiotics (Himedia) were placed on the plates. These plates were subsequently incubated overnight in the dark at 28 °C. The extent of bacterial susceptibility to the antibiotics was determined by measuring the observed zone of inhibition, which represented the diameter of the region where bacterial growth was inhibited. A larger zone indicated greater susceptibility, while a smaller or absent zone indicated antibiotic resistance. The results were expressed as the means of the means obtained from three replicates, with each replicate stemming from three trials per antibiotic tested.
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7

Fungal Chitosan Antibacterial Assessment

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Tetracycline hydrochloride (TCH) and Muller Hinton agar (MHA) were purchased from HiMedia Laboratories (Mumbai, India); MTT (3-(4,5-Dimethyl-2-thiazolyl)-2,5-diphenyl tetrazolium Bromide), acridine orange (AO) and ethidium bromide (EB) was procured from Sigma Aldrich (Mumbai, India); Sodium hydroxide and Lysozyme were obtained from Sisco Research Laboratories Pvt. Ltd. (Chennai, India); Acetic acid (AA) was procured from SD Fine Chem Limited (Chennai, India). All the chemicals were used without further purification. The low molecular weight fungal chitosan, with the degree of deacetylation 80.85%, was isolated from the fungus Cunninghamella elegans[21] (link).
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8

Synthesizing Gold Nanoparticles and Evaluating Cytotoxicity

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Chloroauric acid (HAuCl4.3H2O) was purchased from Sigma, USA. Zinc granulated metal (Zn) at a purity of 99.9% was purchased from VWR International, USA. Muller–Hinton agar and nutrient broth medium were purchased from HiMedia (India). The rat embryonic fibroblast (REF) cell line was kindly gifted from the Iraqi Center for Cancer and Medical Genetics Research (ICCMGR). RPMI-1640 medium was purchased from Gibco (USA). Fetal calf serum, streptomycin, penicillin, acridine orange, ethidium bromide, trypsin-EDTA, and crystal violet stain were purchased from Sigma Chemical Co. (St. Louis, MO, USA). Αlpha-hemolysin and b-tubulin antibodies were purchased from Abcam. Hematoxylin and eosin stains were purchased from Sigma (USA). All other chemicals and reagents were of the analytical grade level.
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9

Antibiotic Susceptibility Testing Protocol

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The isolates were tested by the Kirby-Bauer disc diffusion method on Muller Hinton agar (Hi-Media) using 0.5 McFarland's as the turbidity standard as per CLSI guidelines. Antimicrobial disks used were Ampicillin (10µg), Amoxycillin-clavulanic acid (20/10µg), Piperacillin (100µg), Piperacillin-tazobactam (100/10µg), Nitrofurantoin (300µg), Norfloxacin (10µg), Ciprofloxacin (5µg), Ofloxacin, (5µg), tetracycline (30µg) Cefuroxime (30µg), Ceftriaxone (30µg), Ceftazidime (30µg), Gentamicin (10µg), Amikacin (30µg), Co-trimoxazole (1.25/23.75 µg), Aztreonam (30µg) and Imipenem (10µg).
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10

Detecting ESBL-Producing Isolates: Combination Disk Method

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The combination disk method was used to detect ESBL producing isolates (12 (link)). In brief, pairs of disks contained cefotaxime (30μg), cefpodoxime (30μg) and ceftazidime (30μg) were used with and without clavulanic acid (10μg) on the same inoculated plate containing Muller Hinton agar (Himedia, India). A positive test result was defined as a ≥5 mm increase in the zone diameter compared to a disk without clavulanic acid (11 (link)). Also, ESBL E-test (CAZ/CAL) was used for ESBL producing isolates (11 (link)).
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