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80 protocols using picrosirius red stain kit

1

Aorta Histomorphometric Analysis

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Mouse aorta samples were isolated, fixed with 10% formaldehyde in PBS at room temperature for 24 h, embedded in paraffin, and sectioned at 7 μm. Aorta morphological histomorphometric characters were analyzed via hematoxylin/eosin (H&E) staining. Picrosirius red stain kit (Polysciences Inc. Warrington, PA, USA) was performed to identify collagen fibers, following the manufacturer’s instructions. H&E staining and Picrosirius red-stained collagen were observed under light microscopy (Leica Imaging Systems, Cambridge, UK). The digital photomicrographs were quantified with Image-Pro Plus Software (Media Cybernetics, USA). The stainings were assessed and quantified blindly by two independent observers.
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2

Muscle Regeneration in Aged Mice

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Sections of TA muscles were harvested at five or 14 days post-injury from adult or aged Ctl and P7:S4KO mice. Regenerated skeletal muscles harvested five days after injury were immunostained with embryonic Myosin Heavy Chain (eMyHC) antibodies to label actively regenerating fibers and average cross-sectional area of 250–300 myofibers was quantified with ImageJ. Regenerated skeletal muscles harvested 14 days after injury were processed for H and E or Sirius Red staining. For H and E, flash-frozen sections were fixed for 3 min in 4% PFA, stained with Mayers Hematoxylin and Alcoholic Eosin Y, dehydrated, equilibrated with xylene and mounted using Cytoseal 60 (Richard-Allan Scientific, Kalamazoo, MI). For Sirius Red staining, a Picrosirius Red stain kit (Polysciences, Warrington, PA) was utilized. Frozen sections were fixed for 1 hr at 56°C in Bouin’s fixative, washed in water, stained for 1 hr in Picrosirius Red, washed in 1 M HCl, dehydrated, equilibrated and mounted. Bright-field images were collected with a Zeiss Axioskop 40 microscope. To obtain quantification of average cross-sectional area and frequency distribution of 14dpi regenerated fiber size, Myosin/Laminin immunostained TA sections were analyzed using ImageJ software.
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3

Immunohistochemical Analysis of ACLP and SMA

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Immunohistochemical staining was carried out as described previously [28 (link)]. A mouse anti-Human ACLP/AEBP1 mAb (1:100 dilution, LS-C133036; LSBio), mouse anti-α-smooth muscle antigen (α-SMA) mAb (1:50 dilution, M0851; CiteAb, Bath, UK), and mouse anti-CD8 mAb (clone C8/144B; DAKO) were used. Areas positive for ACLP and α-SMA were measured using ImageJ software ver. 1.52 (NIH, Bethesda, MD, USA) as described [29 (link)]. Collagen I was stained using a Picrosirius Red Stain Kit (Polysciences, Warrington, PA, USA) according to the manufacturer’s instructions.
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4

Histological Evaluation of Liver Disease

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The livers were removed, weighed, and a portion was fixed in 10% neutral buffered formalin, embedded in paraffin, sectioned at 5 μm, and stained with hematoxylin and eosin. Sirius red staining was performed using the paraffin-embedded liver sections (method adapted from Picrosirius Red Stain Kit, Polysciences, Inc., Warrington, PA, USA). The liver histology was assessed in a blinded fashion by a veterinary pathologist (S.G.) for steatosis, lobular inflammation, and hepatocellular ballooning to derive the NAFLD Activity Score (NAS) as described (23 (link)). Sirius red stained sections were blindly assessed by S.G. for Ishak Stage using the scores adapted from Ishak et al. (24 (link)).
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5

Characterizing Cardiac Gene Expression

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qRT–PCR, luciferase reporter assay, and immunohistochemistry were performed as described previously (Pei et al. 2006 (link), 2011 (link), 2015 (link); Wang et al. 2017 (link); Zhao et al. 2018 (link)). We isolated total RNA from mouse tissues or HL-1 cells using RNAzol RT (Molecular Research Center) following the manufacturer's instructions. The antibodies used were PECAM1 (Santa Cruz Biotechnology, sc-46694; and BD Biosciences, 550274), NPR3 (Santa Cruz Biotechnology, sc-515449), TNNI3 (Abcam, ab47003), Ki67 (Vector Laboratories, vp-RM04), and GDF15 (Abcam, ab189358). Sirius Red staining was performed using the Picrosirius Red stain kit (Polysciences). Adenovirus construction and pericardial injection were performed as described previously (Pei et al. 2006 (link), 2011 (link); Wang et al. 2017 (link)).
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6

Quantitative Collagen Analysis in Tissue

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The biopsy samples were fixed with 10% neutral buffered formalin for 24 h at room temperature, and were subjected to embedding in paraffin. Sections 5 μm thick were cut and stained with hematoxylin–eosin (HE) and picro-sirius red (PSR). PSR staining was performed using a picro-sirius red stain kit (Polysciences, Inc., Warrington, PA, USA), which stains type I and type III collagens. Bright field images of the sections were acquired using a wide-field inverted microscope (All-in-one fluorescence microscope BZ-X700, Keyence, Inc., Osaka, Japan) with a 20× magnification objective lens (PlanFluor 20× NA:0.45, Nikon, Inc., Tokyo, Japan).
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7

Histological Analysis of Scaffold Structure

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Scaffold sections (15 μm thickness) were hydrated using a decreasing ethanol gradient to 75% and then washed for 5 min in water. Hematoxylin and eosin (H&E) staining and Picrosirius Red Stain Kit (Polysciences, Inc., Warrington, PA, USA) were used for 60 min. Samples were dehydrated using an increasing ethanol gradient and cleared in xylene for 5 min. Finally, sections were mounted using Eukitt (Sigma-Aldrich, Milan, Italy) mounting medium. Picrosirius red brightfield and polarized light images were acquired with a Brunel polarization microscope equipped with a Nikon D500 camera.
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8

Quantifying Cardiac Fibrosis and Cardiomyocyte Size

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Cardiac fibrosis was determined by Sirius Red staining by using a Picrosirius Red Stain Kit (Polysciences Inc.). Cryosections were fixed in Bouin’s solution (1h, 56°C), then stained with Sirius red. Collagen fibers in the heart stained a red color and cardiac fibrotic area was evaluated using ImageJ software. Cardiac fibrosis was quantified including the infarct scar. Size of cardiomyocytes was evaluated on cross sections using Wheat germ agglutinin (WGA) Alexa Fluor® 488 conjugate (Invitrogen).
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9

Picrosirius Red Collagen Staining

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PSR staining was performed using the Picrosirius Red Stain Kit (Cat#24901-250, Polysciences Inc.).
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10

Collagen Composition Analysis in Mouse Ovaries

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Ovaries from four-week mice were isolated and fixed in Histochoice (Amresco, Solon, OH, USA) at room temperature (RT) for 4 h and paraffin embedded. Serial 6 μm paraffin cross-sections were made. After deparaffinization, sections were stained with Picrosirius Red Stain Kit (#24901, Polysciences inc.), examined under polarized light with a polarized microscope. Optical micrographs were obtained by an optical microscope Zeiss Axioplan 2, at 25 °C. The temperature was kept constant ±1 °C by a hot stage device connected to a thermostatic bath. Picrosirius red dye stains type I collagen in yellow, type III in green, and other collagens in red. A hue selection method was used to select and quantify the proportions of different fibril color (Rich and Whittaker, 2005 ).
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