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11 protocols using stem pro 34 sfm media

1

PBMC Reprogramming to iPSCs

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For both human subjects, peripheral blood mononuclear cells (PBMCs) were isolated by density centrifugation using Histopaque-1077 (MilliporeSigma Corporate, St. Louis, MO, USA). The isolated PBMCs were expanded using Stem Pro-34 SFM media (Thermo Fisher Scientific, Waltham, MA, USA) with cytokines of SCF (100 ng/mL), IL-3 (10 ng/mL), EPO (2 units/mL), IGF-1 (40 ng/mL), and dexamethasone (1 µM). The expanded PBMCs were transduced by Sendai virus from the CytoTune ™-iPS 2.0 Sendai Reprogramming Kit (ThermoFisher Scientific) for reprogramming into induced pluripotent stem cells (iPSCs). At 3 days post transduction, the reprogrammed PBMCs were transferred onto vitronectin (RHVTN-N, ThermoFisher) coated wells (3.75 µg in 1.5 mL DPBS per well of a 6-well plate) and cultured in Stem Pro-34 SFM media. After 4 days, the reprogrammed cells were switched into TeSR™-E8™ medium (STEMCELL Technologies, Cambridge, MA, USA) without any supplement. Individual iPSC clones were picked and passaged for cell expansion in TeSR™-E8™ medium. Cultured cells were maintained at 37 ℃ and a 5% CO2 condition in an incubator, and the media were changed daily.
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2

Differentiation of hESCs to Hematopoietic Lineage

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Nearly confluent hESCs, maintained in feeder free conditions, were treated with 50 mM EDTA/PBS solution for 1 min at 37 °C and upon addition of defined medium, the cells were manually cut with StemPro EZ Passaging Tool (Life Technologies) to obtain similar size pieces of colonies to generate homogenous sizes of self-aggregated EBs. Cell clumps collected with serological pipette were left to settle down at room temperature and supernatant was removed. Aggregates were resuspended in serum free StemPro®-34 SFM media (Thermo Fisher) supplemented with 0.5% penicillin/streptomycin, L-glutamine (2 mM), ascorbic acid (1 mM), monothioglycerol (4 × 10 − 4 M; Sigma-Aldrich), transferrin (150 mg/ml) and BMP-4 (10 ng/ml), seeded into low attachment dishes (Corning) to generate embryoid bodies under hypoxic conditions for 4 days. Human haemangioblasts were FACS sorted based on KDR expression and further cultured on fibronectin or GO coated cover slips in serum free StemPro®-34 SFM media (Thermo Fisher) supplemented with 0.5% penicillin/streptomycin, L-glutamine (2 mM), ascorbic acid (1 mM), monothioglycerol (4 × 10 − 4 M; Sigma-Aldrich), 150 mg/ml transferrin, 10 ng/ml VEGF, 5ng/ml bFGF, 50 ng/ml hSCF, and hIL6 (10 ng/ml) (PropsecBio).
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3

Differentiation of iPSCs to viECs

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viEC were differentiated from iPSCs via previously established protocol (Atchinson et al., 2020). On day 0, iPSCs were harvested with Accutase and reseeded on Matrigel-coated six-well plate at a cell density of 47,000 cells/cm2. On day 1, mTeSR1 media was replaced with N2B27 media, which contains neurobasal media (Invitrogen) and DMEM/F12 Glutamax (Invitrogen) in 1:1 ratio with N2 (100×) (Invitrogen) and B27 (-) Vitamin A (Invitrogen). The media was then supplemented with 8 µM CHIR-99021 (Reprocell, Inc., Beltsville, MD, USA), and 25 ng/mL hBMP4 (VWR International LLC, Radnor, PA, USA). Cells were cultured in N2B27 media without media changing for 3 days to achieve lateral mesoderm induction.
On Day 4, N2B27 media was replaced with endothelial induction media which contained StemPro-34 SFM media (Invitrogen) supplemented with Glutamax (Invitrogen) and Pen-Strep (Gibco Cell Culture) in 100:1:1 ratio, and supplemented with 2 µM forskolin (Abcam Inc., Cambridge, UK) and 200 ng/mL VEGF165 (Invitrogen). Media was changed daily from Day 4 to Day 6 and conditioned media was collected on Day 5 to Day 7. viEC were then dissociated on Day 7 with Accutase, and sorted to harvest CD144+ (VE-Cadherin) and CD31+ (PECAM-1) cells, as described below.
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4

Reagents for Stem Cell Culture

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StemPro 34 SFM media and nutrient supplement were obtained from Invitrogen Life Technologies (Paisley, UK). Stem cell factor was obtained from R&D systems (Abingdon, UK). Nucleotides, apyrase, PPADS, poly-L-lysine, EGTA, D-glutamic acid, 4-nitrophenyl N-acetyl-β-D-glucosaminide, Trizma HCl, citric acid and HEPES were purchased from Sigma-Aldrich (Poole, Dorset, UK). Physiological salts, sodium hydroxide and glucose were purchased from BDH anachem. Fura-2 AM was purchased from Calbiochem (Merck Chemicals Ltd., Nottingham, UK) or Invitrogen Ltd. (Paisley, UK). Cesium hydroxide was purchased from ICN Biomedicals Inc. (USA). NF 449 was purchased from Tocris Bioscience (Bristol, UK). AZ 11645373 was a generous gift from AstraZeneca R&D (Charnwood, UK).
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5

Diverse Leukemia Cell Lines Protocol

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The following cell lines were used in this study: p53 wild-type/FLT3ITD: MOLM-13 (adult acute myeloid leukemia), MV4-11 (adult acute myeloid leukemia, MOLT-4 (acute lymphoblastic leukemia). p53 wild-type/FLT3 wild-type: ML-2 (adult acute myeloid leukemia), M-07e (adult acute myeloid leukemia). p53-null/mutant: HL-60 (adult acute myeloid leukemia), THP-1 (adult acute myeloid leukemia). They were purchased from ATCC (Manassas, VA) or DSMZ (Braunschweig, Germany) and maintained in RPMI 1640 media supplemented with 20% heat-inactivated fetal bovine serum (FBS). M-07e cells were cultured in RPMI 1640 supplemented with heat-inactivated fetal bovine serum and GM-CSF (10 ng/ml). All cell lines were maintained at low passage and confluence. Short tandem repeats (STRs) were analyzed to confirm cell line identity and mycoplasma infection was excluded by a PCR-based testing. Human bone marrow (BM) CD34 + cells obtained from healthy donors were purchased from StemCell Technologies, Inc. (Vancouver, BC, Canada) and maintained in StemPro-34-SFM media from GIBCO (Waltham, MA). They were maintained for up to 7 days in liquid culture media. Healthy bone marrow donor-derived MSC were collected under MD Anderson Cancer Center Institutional Review Board approval (LAB02-0395). Human BM-derived MSCs were isolated as described previously58 (link).
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6

SARS-CoV-2 Infection of Lung Mast Cells

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Immortalized human mast cell line, LUVA (Kerafast, USA), was used to model lung-resident mast cell response to SARS-CoV-2 infection. We and others (Laidlaw et al., 2011) have shown that LUVA cells express FcεRI and c-Kit similarly to normal human MC. Cells were cultured in StemPro-34 SFM media (Gibco, USA) with L-glutamine (2 mM) and Penicillin-Streptomycin (10 U/ml) in a humidified incubator at 5% CO2 and 37°C. Cells were maintained at 5x105/ml and passaged up to 15 times; FcεRI and c-Kit expression the cell surface of LUVA cells was maintained throughout passaging.
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7

Culture and Characterization of LAD2 Cells

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The LAD2 cell line (a gift from Arnold Kirshenbaum and Dean Metcalfe from the National Institutes of Health, NIAID) was cultured in StemPro-34 SFM media (Life Technologies, Burlington, ON, Canada) supplemented with 2mM L-glutamine, 100 U/ml penicillin, 50 mg/ml streptomycin, and 100 ng/ml recombinant human SCF (Peprotech, Rocky Hill, NJ, USA). Cells were maintained at 1×105 cells/ml at 37°C and 5% CO2 and periodically tested for the expression of CD117 (eBioscience, Invitrogen Carlsbad, CA, USA), and FcϵRI (eBioscience, Invitrogen Carlsbad, CA, USA) by flow cytometry using a CytoFlex flow cytometer (Beckman Coulter, Brea, CA, USA).
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8

Culturing Human Mast Cell Lines

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HMC-1.1 and HMC-1.2 human mast cell lines were cultured in Iscove's Modified Dulbecco's Medium (Lonza, Mississauga, ON, Canada) containing 10% FBS, 100 U/ml penicillin and 100 µg/ml streptomycin. Cells were maintained at 1  ×  105 cells/ml at 37°C and 5% CO2. The LAD2 cell line was cultured in StemPro-34 SFM media (Life Technologies, Burlington, ON, Canada) supplemented with 2 mM L-glutamine, 100 U/ml penicillin, 50 mg/ml streptomycin, and 100 ng/ml recombinant human SCF (Peprotech, Rocky Hill, NJ). Cells were maintained at 1  ×  105 cells/ml at 37°C and 5% CO2 and periodically tested for expression of KIT and FcεRI by flow cytometry. The cells were used within 8 weeks of thawing from cryopreservation.
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9

LAD2 Cell Line Maintenance Protocol

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The LAD2 cell line (a gift from Arnold Kirshenbaum) was cultured in StemPro-34 SFM media (Life Technologies) supplemented with 2 mM l-glutamine, 100 U/ml penicillin, 50 mg/ml streptomycin, and 100 ng/ml recombinant human SCF (PeproTech, Rocky Hill, NJ). Cells were maintained at 1 × 105 cells/ml at 37 °C and 5% CO2 and periodically tested for expression of c-KIT and FcεRI by flow cytometry.
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10

Single Cell Erythromyeloid Differentiation

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Single cell in vitro assays were set up as with low passage murine MS-5 stroma cells 47 seeded at a density of 1500 cells per 96-well and grown for 2-4 days in H5100 media (StemCell Technologies, 05150). Oneday prior to co-culture initiation, the H5100 media was removed and replaced with 100 μl erythromyeloid differentiation media: StemPro-34 SFM media (Thermo Fisher) with the supplied supplement, 1x L-Glutamine, 1x Pen/Strep, 0.02% Human LDL and the following cytokines: FLT3L (20 ng/mL), GM-CSF (20 ng/mL), SCF (100 ng/mL), TPO (100 ng/mL), EPO (3 U/mL), IL-2 (10 ng/mL), IL-3 (10 ng/mL), IL-6 (50 ng/mL), IL-7 (20 ng/mL), and IL-11 (50 ng/mL).
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