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5 protocols using diva v6

1

Quantifying Surface CXCR4 Expression

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The non-treated and 10 ng/ml TNFα-treated OTICs were suspended in PBS, 0.5%BSA and stained with anti-CXCR4 antibody for 30 min at 4°C. After washing with PBS, cells were incubated with Alexa Fluor 594 anti-rabbit antibody for 30 min at 4°C. Fluorescence-activated cell sorting and analysis were performed on a BD Special Order FACS Aria II system and Diva v6.1.1 (BD Biosciences, San Jose, California). Live single cells were gated based on scatter properties and analyzed for their surface CXCR4 expression.
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2

Single Cell Surface Marker Isolation

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Single cells were suspended in PBS, 2 mM EDTA, 0.5% BSA and stained with antibody for 15
min at 4°C. Fluorescence-activated cell sorting and analysis were performed on a BD Special
Order FACS Aria II system and Diva v6.1.1 (BD Biosciences). Live single cells were gated based on
scatter properties and analyzed for their surface marker expression as previously described
[15 (link)]. Antibodies used for FACS include Epcam-PE
(Miltenyi Biotech), CD44FITC (ebioscience), and CD49f-APC (BioLegend).
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3

Multiparametric Flow Cytometry Analysis

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GFP, Annexin V (APC, BD Bioscience 550474), γH2AX (Alexa Fluor 647, BD Bioscience 560447), THY-1 (PE anti-human CD90 (Biolegend 328110)) and CD75 (Purified anti-human CD75 (LN-1, 326901 Biolegend) levels were analyzed with an LSR II FACS (BD Biosciences) using Diva v6.1.2 (BD Biosciences) and FlowJo software v10 (TreeStar). Cell permeabilization was performed using the Fix and Perm Cell fixation and cell permeabilization Kit (ThermoFisher Scientific, GAS003) following the manufacturer instructions. Goat anti-Mouse IgM Heavy Chain Secondary Antibody, Alexa Fluor® 647 conjugate (1:500) (A-21238, Thermo Fisher) was used as secondary antibody.
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4

Multiparametric Flow Cytometry Analysis

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GFP and cell surface marker expression was analyzed with an LSR II FACS (BD Biosciences) using Diva v6.1.2 (BD Biosciences) and FlowJo software v10.2 (TreeStar). Primary antibodies used were CD19 (clone 1D3, BD Biosciences), MAC-1 (clone M1/70, BD Biosciences), SSEA1 (clone eBioMC-480, eBiosciences), THY1 (clone 53–2.1, eBiosciences), and EPCAM (clone G8.8, eBiosciences).
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5

Multiparametric Flow Cytometry Analysis

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GFP, Annexin V (APC, BD Bioscience 550474), γH2AX (Alexa Fluor 647, BD Bioscience 560447), THY-1 (PE anti-human CD90 (Biolegend 328110)) and CD75 (Purified anti-human CD75 (LN-1, 326901 Biolegend) levels were analyzed with an LSR II FACS (BD Biosciences) using Diva v6.1.2 (BD Biosciences) and FlowJo software v10 (TreeStar). Cell permeabilization was performed using the Fix and Perm Cell fixation and cell permeabilization Kit (ThermoFisher Scientific, GAS003) following the manufacturer instructions. Goat anti-Mouse IgM Heavy Chain Secondary Antibody, Alexa Fluor® 647 conjugate (1:500) (A-21238, Thermo Fisher) was used as secondary antibody.
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