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Lumitrace cfda se kit

Manufactured by Lumiprobe

The LumiTrace CFDA SE kit is a fluorescent labeling reagent that can be used to covalently label proteins. The kit contains the CFDA SE (carboxyfluorescein diacetate succinimidyl ester) dye, which reacts with primary amine groups on proteins to form a fluorescent adduct. This kit can be used for various applications that require protein labeling, such as tracking protein localization or interactions.

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5 protocols using lumitrace cfda se kit

1

Tumor Cell Migration Assay

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To analyze the influence of the tested compounds on tumor cell migration, MDA-MB-231 cells attached to the plate’s plastic bottom were separated by a silicone insert from special migration plates (Culture-insert 2 Well 24, ibiTreat); then, the insert was removed, leaving a gap of 500 ± 50 μm (according to the manufacturer’s data) between the cells. The cells were washed twice by PBS to remove cell debris and floating cells and loaded with a fluorescent probe, a (5,6)-carboxyfluorescein succinimidyl ester (CFDA SE) dye (LumiTrace CFDA SE kit, Lumiprobe, Moscow, Russia). The initial solution of CFDA SE at a concentration of 5 mM in DMSO was dissolved in PBS to prepare a 10 μM solution and was added to the cells for 5 min at 37 °C; then, the cells were washed twice with PBS, and fresh culture medium was added. After that, the cells were treated with various concentrations of glycosides and left for 8 and 24 h. Cells treated with culture medium only were used as control. Cell migration into the wound area was then observed under a fluorescence microscope (MIB-2-FL, LOMO, Saint Peterburg, Russia) with an objective ×10 magnification.
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2

Cell Migration Assay with CFDA SE

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The self-made silicon inserts were placed in the center of the wells in a 24-well plate, and MCF-7 cell suspension was added to each well for 24 h. After adhesion, the inserts were removed and the cells were labeled with (5,6)-carboxyfluorescein succinimidyl ester (CFDA SE) dye (LumiTrace CFDA SE kit, Lumiprobe, Moscow, Russia). CFDA SE stock solution at 5 mM in DMSO was dissolved in PBS to prepare a 10 µM solution. The cell culture medium was replaced with this CFDA SE solution for 5 min at 37 °C. Then, the cells were washed twice with PBS and the fluorescent profile of each well with a 25×25 points matrix was scanned at λex = 485 and λem = 520 nm using the plate reader PHERAstar FS (BMG Labtech, Offenburg, Germany). The data were processed using MARS Data Analysis v. 3.01R2 (BMG Labtech, Offenburg, Germany).
The investigated compound at a concentration of 1 µM was added to each well (DMSO was used as a control), and the cells were incubated at 37 °C. The scanning of the fluorescent profile of the wells was carried out after 24 h and 96 h of incubation. The data were obtained as a relative fluorescent units and visualized in a 3D graph using SigmaPlot software.
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3

CFDA SE-based Cell Proliferation Assay

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The MCF-7 cells were seeded in a 12-well plate for 24 h. After adhesion, the cells were stained with (5,6)-carboxyfluorescein succinimidyl ester (CFDA SE) dye (LumiTrace CFDA SE kit, Lumiprobe, Moscow, Russia). CFDA SE stock solution at 5 mM in DMSO was dissolved in PBS to prepare a 10 µM solution. The cell culture medium was replaced with this CFDA SE solution for 5 min at 37 °C. Then, the cell layer was washed with PBS twice, the cell culture medium was added to each well, and the compound at a concentration of 10 µM was added to each well for 48 h. DMSO at the same concentration was used as a control.
After incubation, the cells were washed with PBS twice, scrabbed, and collected in 1.5 mL tubes. The intensity of CFDA fluorescence was analyzed with a NovoCyte flow cytometer (Agilent, Austin, TX, USA).
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4

Wound Healing Assay with HaCaT Cells

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The silicon 2-well inserts (Ibidi®, Gräfelfing, Germany) were placed in the center of wells in a 24-well plate, and HaCaT cell suspension was added to each well for 24 h. After adhesion, the inserts were removed, and the cells were labeled with (5,6)-carboxyfluorescein succinimidyl ester (CFDA SE) dye (LumiTrace CFDA SE kit, Lumiprobe, Moscow, Russia). CFDA SE stock solution at 5 mM in DMSO was dissolved in PBS for preparation of a 10 µM solution. The cell culture medium was replaced with this CFDA SE solution for 5 min at 37 °C. Then, the cells were washed twice with PBS, and S. aureus suspension (102 CFU/mL) in full DMEM medium was added to each well as necessary. The medium without bacteria was added to control wells. The compounds at a concentration of 10 μM were added to wells after 1 h, and HaCaT cells and S. aureus were cultured at 37 °C in a humidified atmosphere with 5% (v/v) CO2.
The silicon 2-well inserts from Ibidi® formed cell-free zones and migration of HaCaT cells in these zones were observed using an MBF-10 fluorescent microscope (Lomo Microsystems, St.-Peterburg, RF, Russia) during 30 h of incubation.
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5

CFDA SE Cell Proliferation Assay

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The HaCaT cells at a concentration of 1.5 × 104 were seeded in a 12-well plate for 24 h. After adhesion, the cells were strained with (5,6)-carboxyfluorescein succinimidyl ester (CFDA SE) dye (LumiTrace CFDA SE kit, Lumiprobe, Moscow, Russia). CFDA SE stock solution at 5 mM in DMSO was dissolved in PBS for preparation of a 10 µM solution. The cell culture medium was replaced with this CFDA SE solution for 5 min at 37 °C. Then, the cell layer was washed with PBS twice, an S. aureus suspension (102 CFU/mL) in full DMEM medium was added to each need well, and after 1 h, the compound at a concentration of 10 µM was added to the wells. The medium without bacterial suspension was added to the control well.
After 48 h of incubation, the cells were washed with PBS twice, scrabbed, and collected in 1.5 mL tubes. The intensity of CFDA fluorescence was analyzed with a NovoCyte flow cytometer (Agilent, Austin, TX, USA).
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