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Crystal violet

Manufactured by Abcam
Sourced in United Kingdom, United States

Crystal violet is a synthetic dye commonly used in various laboratory applications. It is a triarylmethane dye that has a characteristic deep purple color. Crystal violet is primarily used as a staining agent in microscopy and microbiology procedures.

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7 protocols using crystal violet

1

Cell Invasion Assay with Matrigel

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Cell invasion assays were performed using transwell membranes coated with Matrigel (BD Biosciences, Franklin Lakes, NJ, USA). Transfected cells were plated at a density of 3×104 cells per well in the upper chamber and in serum-free medium. The lower chamber was filled with 20% FBS as a chemo-attractant. After 24 h of incubation, cells remaining in the upper chamber of each well were carefully removed with cotton swabs, and invading cells were fixed with 3% paraformaldehyde (Abcam, Shanghai, China), stained with crystal violet (Abcam, Shanghai, China), and counted from three independent fields (×100 magnification).
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2

Quantifying A549 Cell Migration and Invasion

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Matrigel-coated chambers were used for the determination of cell migration and invasion, respectively. A549 (2 × 105/well, 24-well plate) with treated various concentrations of TiNIR was added to the upper chambers, and the medium was added to the lower chambers. After 40 h, the migrated and invasive cells were immobilized using 4% formaldehyde and stained with crystal violet (Abcam, MA, USA). Images of the cells with the signal of the crystal violet were acquired via a ×10 air objective. The images were analyzed using Celleste Image analysis software ver. 5.0 (Thermo, MO, USA).
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3

Cell Viability, Invasion, and Migration Assay

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Cell viability was investigated using the Cell Counting Kit 8 (WST-8 / CCK8) (Abcam, USA) according to the manufacturer’s instructions. Cell invasion and migration abilities were determined using the CytoSelect™ 24-Well Cell Migration and Invasion Assay kit (Cell Biolabs Inc, USA) according to the manufacturer’s instructions. Invasive or migratory cells were fixed in methanol and stained with crystal violet (Abcam, USA).
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4

Transwell Migration and Wound Healing Assay

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Transwell chambers (CORNING, Corning, NY) were chosen to explore the impact of miR-203a-3p on cell migration and invasion. After transfection, 1×105 cells were resuspended in 200 µL DMEM and then transplanted into upper chambers in 24-well plates. Prior to seed cells, the upper surface of chambers was pre-coated using 50 µL Matrigel before the invasion assay. After transfection 24 h, cells that did not pass through the membrane were cautiously scrubbed by cotton swabs. And the cells transferred to the basement of the membranes were fixed with 4% PFA, and dyed with 0.1% crystal violet (Abcam, Cambridge, UK) for 40 min. The number of migrating and invading cells were photographed and counted 5 randomly selected fields by using a phase contrast microscope (×200) (Zeiss, Oberkochen, Germany).
About the wound healing experiment, seeded 1×105 transected cells per well into 24-well plates, then subcultured to form a monolayer. When the cell density reached over 90%, the monolayer was scratched by using a 100 µL pipette. Then washed the cells twice with DMEM and appended fresh serum-free medium to further incubation. Photos were taken randomly with microscopy (Zeiss, Oberkochen, Germany) at 0 h, 24 h and 48 h. Wound healing rate (%) = (x h Scratch area − 0 h Scratch area)/0 h Scratch area ×100.
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5

Quantitative Cell Proliferation Assay

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Cell proliferation was detected by colony formation assay. In detail, THP-1 cells (1 × 103 cell/per well) were added to a 6-well cell culture plate. After 7–10 days, the cells were fixed at 10–15 min with 4% formaldehyde, and the cells were dyed in the crystal violet (Abcam, Cambridge, UK) for 15 min at room temperature, and finally there were 5 cell fields were selected for counting.
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6

Evaluating miR-378-ASCs-Exos Impact on HUVEC Migration

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To detect the effect of miR-378-ASCs-Exos on the migration capacity of HUVECs, Transwell migration assays were performed as described previously [29 ]. In brief, preconditioned HUVECs (saline, 10 μM DEX, DEX+ASCs-Exos, and DEX+miR378-ASCs-Exos (50 μg/mL)) were plated on the filter membrane of the Transwell insert. As a chemoattractant, complete culture medium was added to the bottom of the lower chamber. After 48 h, the membrane was fixed with 70% ethanol and stained with 2% crystal violet (Abcam, UK). Finally, the number of attached cells was counted from five randomly selected fields in each group under an optical microscope. Averages of cell counts were obtained and compared with that of the control group to calculate relative cell numbers.
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7

Transwell Invasion Assay for Glioblastoma

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U251 and LN229 cells (6 × 104) were suspended in 100 μL serum-free medium. They were then seeded into the upper chamber, and 20% FBS was added to the lower chamber to induce cell invasion through the membrane. Matrigel (1:6 dilution; BD Biosciences) was then added to the upper chamber. After 24 h, cells that invaded across the Transwell membrane and were stained with crystal violet (Abcam, Cambridge, England) that invaded across the Transwell membrane were counted under an optical microscope (Leica, Wetzlar, Germany).
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