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4 protocols using rabbit anti mouse ki67

1

Immunohistochemical Analysis of Liver Markers

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Deparaffinized sections of livers (3 μm thick) were hydrated and heat epitope retrieval was performed in microwave oven in retrieval solution buffer pH = 6. After cooling to room temperature (RT), the slides were incubated with 0.3% solution of H2O2, washed twice with PBS and further incubated with 2.5% horse serum. After washing in PBS slides were incubated with primary antibody: rabbit anti-mouse Ki67 (Novus, USA) and rabbit anti-mouse Bax (Santa Cruz Biotech., USA) for 1 h in RT. After washing in PBS immunoreaction was visualized with ImmPRESS UNIVERSAL REAGENT and Vector NovaRED Substrate KIT FOR PEROXIDASE (VECTOR LABORATORIES, USA) according to manufacturer protocol. As a negative control, the primary antibody was replaced with PBS on the specimen. Positive staining was defined by visual identification of a yellow/brown pigmentation in the light microscope. Images were collected with an Olympus IX81 inverted microscope (Olympus) with color camera and with CellSens image processing software (Olympus).
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2

Comprehensive Colon Pathology Assessment

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Mice were euthanized at days 0, 5 and 11. Thereafter, the colons were obtained, fixed in 4% formaldehyde, embedded in paraffin and colonic tissue specimens were prepared (0.5μm). The slides were stained with H&E to assess the severity of colon pathology as previously described (18 ). TUNEL (Roche, TMR-red Kit, Rehovot, Israel or Abcam, HRP-DAB kit, Cambridge, UK) staining was used to assess apoptotic cell burden (19 (link)). Rabbit anti-mouse ki67 (Novus, CO, USA) was used on slides to quantify the proliferative epithelial cells. Alcian blue staining was applied on slides to detect goblet cells (GC). GC was quantified and the following score was given to each colon: 0= No epithelial tissue and no goblet cells, 1= up to 25% from epithelial layer are GC, 2 = 26%-50% from epithelial cells are GC, 3 = 51%-75% from epithelial cells are GC, 4 = 76%-100% from epithelial cells are GC.
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3

Immunofluorescence Staining of Frozen Tumor Sections

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Frozen OCT-embedded D4M.3A primary tumors were cryosectioned into 5 μm thick sections. Immunostaining of the frozen sections was performed using the BOND RX automated IHC stainer (Leica Biosystems, Wetzlar, Germany). Briefly, slides were incubated with goat serum (10% goat serum in PBS X1 + 0.02% Tween-20) for 30 min to block non-specific binding sites. Slides were then incubated with rabbit anti-mouse Ki67 (1:50 dilution, Novus biologicals, Centennial, CO, USA ), rabbit anti-mouse cleaved caspase 3 (1:30 dilution, Cell Signaling, Danvers, MA, USA), rabbit anti-mouse phospho-MEK (1:50 dilution, Cell Signaling, Danvers, MA, USA) and with rabbit anti-mouse phospho-ERK (1:28 dilution, Novus biologicals, Centennial, CO, USA). After1 h incubation, slides were incubated for an additional 1 h with the secondary antibody goat anti-rabbit Alexa-488 (1:350 dilution, Abcam, Cambridge, UK) followed by Hoechst fluorescent dye (1:5000) for additional 10 min for nuclei counterstained. The tissues stained were then fixed and mounted on a glass microscope slide with a glass coverslip using ProLong™ Gold antifade reagent (Invitrogen). Fluorescence images were captured using a fluorescence microscope (Evos FL Auto, Life Technologies) at 40x magnification.
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4

Quantifying Tumor Angiogenesis and Vessel Morphology

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Detailed methods can be found in supplemental methods. Antibodies include: rat anti-mouse CD31, 1:50 (BD Pharmingen); mouse anti-mouse alpha smooth muscle actin, 1:100, (Abcam); rabbit anti-mouse γH2AX, 1:750 (Millipore); rabbit anti-mouse Ki67, 1:250 (Novus); rabbit anti-human CD3, 1:200 (Dako).
For quantification, 5 random 10× magnification pictures were taken of each slide and the area of CD31+ structures, number of visible lumens, vessels, and vessels > 100 μm was counted. Values for each of the 5 sections were averaged to obtain one value for each tumor. Individual averages for all tumors within a treatment group were then averaged to determine the group average and SEM.
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