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14 protocols using anti mac2

1

Acetone-fixed Aortic Root Immunohistochemistry

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Immunohistochemistry of acetone-fixed 5 μm aortic root cryosections was performed using anti-Mac-2 (Cedarlane Laboratories, Burlington, Ontario, Canada). Following hemalaun counterstain sections were digitally photographed under standardized conditions using Zeiss AxioCam MrC and analyzed using Zeiss AxioVision software.
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2

Histological and Immunohistochemical Analysis of Explants

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Histology and immunohistology were conducted on paraformaldehyde-fixed 4-6 μm paraffin and cryo-sections of the explants as previously reported [42 (link)]. Hematoxylin/eosin staining was performed to obtain microscopic overview. Masson trichrome staining allowed for depicting of connective tissue. For immunohistology, the primary antibodies anti-CD3, anti-CD68 (both from Abcam, Cambridge, MA, USA) and anti-Mac-2 (Cedarlane, Burlington, ON, Canada), and Alexa Fluor®-conjugated secondary antibodies (Life Technologies, Carlsbad, CA, USA) were used. Immuno-labelled sections were covered with DAPI-containing Vectashield mounting medium (Vector Labs, Peterborough, United Kingdom) and visualized on a LSM 880 confocal microscope (Zeiss, Jena, Germany).
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3

Immunofluorescence Staining of Paraffin Sections

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Paraffin sections were rehydrated, subjected to antigen retrieval by placing in a pressure cooker for 10 min in Antigen Unmasking Solution (H-3300, Vector), and blocked with serum. Sections were labeled with αSMA (F3777, Sigma, Burlington, MA), anti-TAZ (HPA007415, Millipore Sigma, Burlington, MA), anti-Mac2 (no. CL8942AP, Cedarlane, Burlington, NC), anti-Clec4f (no. AF2784, R & D, Minneapolis, MN), anti-F4/80 (no. 70076, Cell Signaling) or anti-Ki67 (no. AF7617, R & D) antibody overnight, followed by incubation with a fluorophore-conjugated secondary antibody for 1 h. The stained sections were mounted with DAPI-containing mounting medium (P36935, Life Technologies, Carlsbad, CA) and then viewed by fluorescence microscopy. ImageJ was used to quantify the stained area, with consistent threshold settings applied for each analysis. Three randomly selected fields were quantified per section per mouse for image analyses.
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4

Immunohistochemical Analysis of Immune Cells

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Tissues were formalin-fixed and paraffin-embedded. Neutrophil (CD11b+Ly6G+ cells) were stained as described,13 ,18 (link) and counted in 3 random fields per section.
For Mac2, F4-80, and Ki67 staining, after blocking with 3% of H2O2 for 20 min at room temperature (RT), and horse serum 1:75 in PBS, 20 min RT; sections were incubated overnight at 4°C with anti-MAC2 (Cedarlane, Burlington, Ontario, Canada), -F4-80 (Biorad, Hercules, CA, United States) or -Ki67 (Cell Signaling, Danvers, MA, United States) in PBS. Tissue sections were then washed and incubated with IgG biotinylated antibody for 30 min at RT, washed in PBS and incubated in ABC reagent (Vector Laboratories, Burlingame, CA, United States) for 60 min at RT, PBS washed, incubated with 3,3′-diaminobenzidine as substrate (Sigma); and haematoxylin counterstained. Positive cells were counted in 3 fields per section. Terminal deoxynucleotidyl transferase dUTP nick-end labelling (TUNEL) was performed according to the manufacturer (TMR Red, Roche, Basel, Switzerland).
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5

Immunohistochemical Staining of Liver and Adipose Tissue

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Formalin-fixed frozen liver and adipose tissue sections (10-mm thickness) were stained with primary antibodies (anti-ASO, gift from Ionis Pharmaceuticals, 1:10,000; anti-RIP1, Life Techonologies PA5–20811, 1:40; and anti-Mac2, Cedarlane CL8942AP, 1:500) at 4° C overnight or Oil Red O at 60 °C for 12 min as previously described11 (link). Slides were then counterstained with Harris haematoxylin (SH30, Fisher Scientific) and mounted in Aquatex (108562, Merck). Quantification of staining was performed using ImageJ software. Negative control staining is shown in Supplementary Fig. 5.
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6

Protein Expression Analysis for Cell Signaling

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Anti-phospho-NF-κB p65 (ser536)(#3033), anti-NF-κB p65 (#8242), anti-iNOS (#2982), Anti-AMPKα (#2532), Anti-phosphoAMPKα(Thr172)(#2535), β-actin (#4967) antibodies were from Cell Signaling (Beverly, MA). Anti-eNOS mouse polyclonal antibody (#610296) was obtained from BD Bioscience (Lexington, KY). Anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (FL-335) rabbit polyclonal antibody was obtained from Santa Cruz Biotechnology (Santa Cruz, CA). Anti-Mac2 (Cedarlane Laboratories). Total Akt, p-Akt (Ser 473), IRS-1, IRS-2 and p-IRS1, p-IRS-2 ELISA kits were purchased from Cell Signaling.
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7

Immunohistochemical Analysis of Mouse Brain

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Anesthetized mice were first perfused with PBS followed by 4% PFA. Brains were isolated and incubated in 4% PFA for overnight and subsequently placed on graded sucrose (10%, 20%, 30%) for 24 h at 4°C each. The brains were embedded with OCT compound and snap-frozen in a mixture of dry ice and isopentane. Next, 12 μm of serial coronal section of the brain was sliced with a cryostat (Leitz Camera) and mounted immediately onto Superfrost (+) slides (Fisherbrand). Immunofluorescent staining was performed by blocking the sections with 5% BSA containing 0.3% Triton X-100 in PBS for 1 h. The following primary antibodies were incubated overnight at 4°C: Iba-1 (1:200; WAKO), Iba-1 (1:200; Millipore), anti-GFAP (1:300; Abcam), anti-Olig2 (1:200; NovusBiologicals), and anti-Mac2 (1:200; Cedarlane) antibodies. Sections were washed three times with PBS and subsequently incubated for 1 h with the following secondary conjugated antibodies at RT: Alexa Fluor 488 (1:200; Invitrogen) and Alexa Fluor 568 (1:200; Invitrogen). Counterstain was performed with DAPI for 30 s and mounted. For floating sections, 30 μm of the coronal section was sliced and immersed in PBS and followed the procedure described above. The presence of myelin was observed using a Black-Gold II staining kit (TR-100-BG; Biosensis) according to the manufacture’s instruction (Millipore).
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8

Multicolor Immunohistochemistry Imaging

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Toledo xenograft tumors were formalin fixed, paraffin embedded and sectioned, followed by staining with hematoxylin and anti-CD31 (polyclonal, Abcam) or anti-F480 (clone A3-1, Abcam) or anti-Mac-2 (Clone M3/38, Cedarlane) antibodies. Stained slides were scanned and subjected to stain separation using a customized python implementation that converts from color space to optical density using an unmixing color vector matrix for the individual stains. The individual isolated stains were then projected into a new color space using MATLAB, and overlaid on the unmixed CD31 image in ImageJ. The histology and image analysis were performed by the STTARR facility under the University Health Network, Toronto.
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9

Immunohistochemical Analysis of Femoral Arteries

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Femoral arteries were dissected and embedded in paraffin, and cross-sections were cut at 200 μm intervals. The sections were deparaffinized and treated with citrate buffer for antigen retrieval, followed by incubation in 3% H2O2. The sections were then blocked with Dako serum-free blocking solution (Dako, X090930) and incubated with primary antibody at 4°C overnight. Next, the sections were incubated with biotinylated secondary antibodies for 30 min at room temperature. VECTASTAIN ABC HRP kit (Vector Laboratories, PK-4000) and DAB peroxidase substrate kit (Vector Laboratories, SK-4100) were used for detection. Hematoxylin was used for nuclear counterstaining. The primary antibodies used in this study are anti-SIK3 (LSBio, LS-B9603), anti-SM-α-actin (Dako, M0851), anti-PCNA (Santa Cruz, sc-56), and anti-Mac2 (Cedarlane, CL8942AP). The matched IgG was used for negative control. Slides were visualized, and images were captured by Zeiss AxioImager M1 microscope.
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10

Immunohistochemical Analysis of Adipose Tissue

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After fixation, AT was embedded in paraffin as described previously (22 (link), 29 (link)). At 4°C sections were incubated overnight with primary antibodies anti-Mac-2 (1:1000; Cedarlane; Burlington, ON, Canada; CL8942AP) and anti-PerilipinA (1:200; Abcam; Cambridge, UK; ab3526). Next, fluorochrome-conjugated secondary antibodies were applied for 1 h at room temperature (1:200; Invitrogen; Waltham, MA, USA). For nuclear staining DAPI (1:10,000; Thermo Fischer Scientific; Waltham, MA, USA; 62248) was used. For control stainings, same routines without primary antibodies were applied. A confocal Leica SPE microscope (Leica; Wetzlar, Germany) was used for image acquisition. Quantification of adipocyte size, interstitial macrophages and CLS density were performed semi-automatically with cellSens Software (Olympus; Hamburg, Germany) as described previously (30 (link)). H&E stainings were performed following standard routines (29 (link)).
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