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6 protocols using sd semi dry transfer cell

1

Western Blot Analysis of MYPT1 Phosphorylation

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Western blot analysis was performed as described previously 14 (link). Cells were lysed in PRO-PREP protein extract solution (iNtRON Biotechnology, Houston, TX, USA) to obtain total cell lysates, and the lysates were centrifuged at 100,000 × g for 20 min at 4°C. Protein concentrations were determined using the Bradford method. For preparation of sample loading, equal volumes of 2× sodium dodecyl sulfate sample buffer (0.1 mol/L Tris-HCI, 20% glycerol, 4% sodium dodecyl sulfate, and 0.01% bromophenol blue) and supernatant fractions from the lysates were mixed. Proteins (60 µg) were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis for 90 min at 110 V. The separated proteins were transferred onto polyvinylidene difluoride membranes for 2 h at 20 mA using SD Semi-dry Transfer Cells (Bio-Rad Laboratories, Hercules, CA, USA). After blocking the membranes using 5% nonfat milk in Tris-buffed saline (pH 7.0), the membranes were incubated overnight at 4°C with primary antibodies (anti-phospho-MYPT1 and anti-MYPT1 antibodies) at a dilution of 1:500 in 5% skim milk in Tris-buffed saline containing Tween-20. Bound antibody was detected with horseradish peroxidase-conjugated anti-mouse IgM. Membranes were washed and developed using the Western Blotting Luminol Reagent system (iNtRON Biotechnology) and autoradiography.
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2

Western Blot Analysis of Protein Extracts

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Western blot analysis was performed using the method described by Lee et al. 20 (link). Cells were lysed in PRO-PREP protein extract solution to obtain total cell lysates, and the lysates were centrifuged at 13,000 rpm for 20 min at 4°C. The protein concentrations were determined using the Bradford method. For sample loading, equal volumes of 2× sodium dodecyl sulfate sample buffer (0.1 mol/L Tris-HCI, 20% glycerol, 4% sodium dodecyl sulfate and 0.01% bromophenol blue) and supernatant fractions from the lysates were mixed. Proteins (60 µg) were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis for 90 min at 110 V. The separated proteins were transferred to polyvinylidene difluoride membranes for 2 h at 20 mA using SD Semi-dry Transfer Cells (Bio-Rad Laboratories, Hercules, CA, USA). After blocking the membranes with 5% nonfat milk in Tris-buffered saline (pH 7.0), the membranes were incubated overnight at 4°C with specific antibodies at a dilution of 1:500 in 5% skim milk in Tris-buffered saline containing Tween-20. Bound antibody was detected with horseradish peroxidase-conjugated anti-goat or anti-rabbit IgG. The membranes were washed and developed using a western blotting luminol reagent system (iNtRON Biotechnology, Houston, TX, USA) and autoradiography.
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3

Western Blot Analysis Protocol

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Western blot analysis was performed as described by Ok et al. 24 (link). In brief, the cells were lysed in PRO-PREP protein extract solution (iNtRON Biotechnology, Houston, TX, USA) for total cell lysates, and the lysates were centrifuged at 100,000 × g for 20 min at 4°C. The protein concentration was determined using the Bradford method. For the preparation of the sample loading, equal volumes of 2× sodium dodecyl sulfate (SDS) sample buffer (0.1 mol/L Tris-HCI, 20% glycerol, 4% SDS, and 0.01% bromophenol blue) and supernatant fractions from the lysates were mixed. Sixty micrograms of protein were separated with 10% SDS-polyacrylamide gel electrophoresis for 90 min at 110 V. The separated proteins were transferred to polyvinylidene difluoride membranes for 2 h at 20 mA using SD Semi-dry Transfer Cells (Bio-Rad Laboratories, Hercules, CA, USA). After blocking the membranes in 5% nonfat milk in Tris-buffed saline (pH 7.0), the membranes were incubated overnight at 4°C with specific antibodies at a dilution of 1:500 in 5% skim milk in Tris-buffed saline containing Tween-20. Bound antibody was detected with horseradish peroxidase-conjugated anti-goat or anti-rabbit IgG. Membranes were washed and developed using a western blotting luminol reagent system (iNtRON Biotechnology) and autoradiography.
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4

Cadmium-Induced Signaling Pathway Analysis

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To determine the expression of cyclins and CDKs, serum-starved cells were
treated with CdCl2 for 48 h in 0.2 % BSA-supplemented phenol red-free
RPMI 1640 medium. For determination of ERK and AKT phosphorylation, the serum-starved
cells were treated with CdCl2 in serum-free medium for 15 min or 6 h,
respectively. Phosphorylation of EGFR was also determined after 15 min incubation with Cd.
The cells were washed with PBS before harvest and lysed in RIPA buffer supplemented with
protease inhibitor, 2 mM PMSF, and phosphatase inhibitor. The cell lysates were
centrifuged at 14,000 × g for 10 min and proteins in the supernatant were
separated by electrophoresis. Protein bands were transferred from the gel to the
nitrocellulose membrane in an SD Semi-dry Transfer Cell (Bio-Rad, Hercules, CA) at 24 V
for 1 h. The membrane was blocked in 5% non-fat milk for 1 h and incubated with
corresponding primary antibody at 4°C. After overnight incubation, the membrane
was washed three times with 0.1% PBS-Tween 20 for 10 min each and incubated, with
the goat anti-rabbit/mouse secondary antibody (1:10,000 dilution). The membrane was washed
again three times for 10 min each with PBS-Tween and scanned in an Odyssey Infrared Imager
(Li-Cor, Lincoln, NE).
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5

Immunodetection of Cry1Ab Toxin in Transgenic Tomatoes

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Western immunoassay was performed with cell-free extracts of transgenic tomato plants expressing Cry1Ab toxin as described earlier (Sambrook et al. 1989 ). Aliquots of the total plant protein samples were boiled for 10 min with 2× sample loading dye [50 mM Tris–HCl (pH 6.8), 100 mM DTT, 2% SDS, 0.1% bromophenol blue and 10% glycerol] and electrophoresed on 10% denaturing SDS-PAGE. The resolved protein bands on SDS-PAGE were transferred onto immunoblot™ PVDF membrane (Bio-Rad, USA) using SD semi-dry transfer cell (Bio-Rad, USA) in transfer buffer [25 mM Tris base, 192 mM glycine (pH 8.3) and 0.1% SDS]. The membranes were blocked for 2 h at 25°C in blocking buffer and incubated with primary antibody (rabbit polyclonal to B. thuringiensis Cry1Ab toxin protein, Agdia, USA) diluted to 1:1000 ratio in blocking buffer, for 2 h at 25°C. The membranes were washed four times with PBST, followed by incubation with secondary antibody (goat polyclonal to rabbit IgG-alkaline phosphatase conjugated antibody, Sigma, USA) at 1:5000 dilution for 2 h at 25°C and colour development with BCIP-NBT substrate solution (Sigma, USA).
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6

Western Blot Analysis of Signaling Pathways

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Total cell lysates were extracted using CytoBuster™ Protein Extraction Reagent (Novagen). Equal amounts of protein were separated on 10 to 15% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gels at 300 mA for 20 min. They were then transferred to Immobilon-P polyvinylidene difluoride (PVDF) membranes (Millipore Sigma, Billerica, MA, USA) using a trans-blot SD Semi-Dry Transfer Cell (Bio-Rad, Hercules, CA, USA). After transfer, the membranes were incubated in Tris buffered saline (TBS), 5% dry milk, and 0.2% Tween 20 for 1 h. They were then further incubated in TBS and 0.2% Tween 20 with specific antibodies at 4 °C overnight. After washing, a horseradish peroxidase (HRP)-labeled secondary antibody was applied and the membranes were incubated for 2 h. Immunoblot detection was performed using Immobilon Western HRP Substrate (Millipore Sigma). The following antibodies from Cell Signaling Technology were used: anti-protein kinase B (PBK/Akt), anti-phospho-Akt (Ser473), anti-c-jun N-terminal kinase (JNK), anti-phospho-JNK, anti-p38, anti-phospho-p38, anti-p44/42 extracellular signal-related kinase (ERK), anti-phospho-p44/42 ERK, and anti-GAPDH.
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