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8 protocols using sc 22514

1

Cytokine and Inflammasome Protein Expression

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Supernatant, Lys, and Pellet samples were separated on a sodium dodecyl sulfate polyacrylamide gel (10% or 16%), transferred into a polyvinylidene difluoride membrane (Pall Co., Port Washington, NY, USA), and blocked with 3% skim milk. The membrane was probed with primary antibodies against anti-mouse IL-1β antibody (AF-401-NA, R&D Systems, Minneapolis, MN, USA), anti-human IL-1β antibody (AF-201-NA, R&D Systems), anti-Asc antibody (sc-22514, Santa Cruz Biotechnology, Dallas, TX, ), anti-tumor necrosis factor (TNF)α antibody (sc-1351, Santa Cruz Biotechnology), anti-NLRP3 antibody (AG-20B-0014-C100, AddipoGen Co., San Diego, CA, USA) or anti-actin antibody (sc-1615, Santa Cruz Biotechnology) overnight at 4°C. The membranes were further probed with HRP-conjugated 2nd anti-sera (sc-2020 or sc-2004, Santa Cruz Biotechnology) and visualized using Power-Opti ECL solution (BioNote Co., Gyeonggi-do, Korea) and a cooled charge-coupled device camera system (AE-9150, EZ-Capture II, ATTO Technology, Tokyo, Japan). The intensity of bands was measured by CS Analyzer Version 3.00 (ATTO Technology).
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2

Western Blot Analysis of Inflammasome Proteins

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THP-1 and HEK293T cells were lysed with RIPA buffer supplemented with cOmplete protease inhibitors (11697498001; Roche Biochemicals, Mannheim, Germany). Whole-cell lysates were incubated on ice for 30 minutes and clarified by means of centrifugation. Whole-cell lysates were eluted with SDS-PAGE sample buffer, resolved on Novex 4-12% SDS-PAGE gels with MES running buffer, and subsequently transferred onto nitrocellulose membranes. Membranes were blocked overnight in 3% BSA plus 0.1% Tris-buffered saline–Tween 20 at room temperature for 1 hour and then probed overnight at 4°C with primary antibodies, including α-NLRC4 (rabbit α-NLRC4; D5Y8E; Cell Signaling Technology, Danvers, Mass), α–caspase-1 (mouse α–caspase-1 p20; AdipoGen, San Diego, Calif), α-ASC (rabbit α-ASC; sc-22514; Santa Cruz Biotechnology, Dallas, Tex), α–caspase-8 (mouse α–caspase-8; #9746; Cell Signaling Technology), and α-actin (goat α-actin; sc-1616; Santa Cruz Biotechnology).
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3

Western Blot Analysis of Inflammasome Components

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Sup, Lys, and Pellet samples were separated by SDS-PAGE (10% or 16%) using running buffer (25 mM Tris, 192 mM glycine, 0.1% SDS, pH 8.3) and Mini-PROTEAN® Tetra Handcast Systems (BIO-RAD, Hercules, CA, USA) and transferred onto a polyvinylidene difluoride membrane (PVDF; 10849A, Pall Co., Port Washington, NY, USA) using transfer buffer (25 mM Tris, 192 mM glycine, 10% methanol, pH 8.3) and CriterionTM Blotter (BIO-RAD). The membrane was probed with primary antibodies against anti-mouse IL-1β antibody (AF-401-NA, R&D Systems, Minneapolis, MN, USA), anti-Caspase-1(p20) antibody (AG-20B-0042-C100, AdipoGen® Co., San Diego, CA, USA), anti-Asc antibody (sc-22514, Santa Cruz Biotechnology), anti-NLRP3 antibody (AG-20B-0014-C100, AdipoGen® Co.), anti-GSDMD antibody (ab209845, Abcam plc., Cambridge, MA, USA), or anti-Actin antibody (sc-1615, Santa Cruz Biotechnology) overnight at 4 °C. The membranes were further probed with HRP-conjugated 2nd anti-sera (sc-2020 or sc-2004, Santa Cruz Biotechnology) and visualized using a chemiluminescence detection solution (WESTSAVER STAR, AbFrontier, Seoul, Republic of Korea) and a cooled CCD camera System (AE-9150, EZ-Capture II, ATTO Technology, Tokyo, Japan). Full-length bolts for figures were shown in Supplementary information.
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4

Western Blot Analysis of Inflammasome Proteins

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Hearts were homogenized in RIPA lysis buffer (9806; Cell Signaling). Protein concentration was determined by BCA kit assay (23225; Pierce Biotechnology). An equal amount of protein (30 μg) was separated by sodiumdodecyl sulphate polyacrylamide gel electrophoresis and transferred onto a nitrocellulose membrane (Bio‐Rad). Subsequently, the membrane was blocked with 5% nonfat dry milk or 3% bovine serum albumin (37520; Thermo Fisher Scientific) in TBST for 1 h (room temperature). Primary antibodies for NLRP3 (ab4207; Abcam, 1:500), ASC (sc22514; Santacruz, 1:500), caspase‐1 (ab108362; Abcam, 1:500), IL‐1β (ab9722; Abcam, 1:500), eNOS (#32027; Cell Signaling, 1:500), NOX2 (ab129068; Cell Signaling, 1:1000), NOX4 (ab133303; Abcam, 1:5000), and β‐actin (sc47778; Santa Cruz Biotechnology, 1:2000) were incubated at 4° overnight, and those were matched to their corresponding horseradish peroxidase‐conjugated secondary antibodies for 1 h (room temperature). Blots were developed with the enhanced chemiluminescence (RPN2232; GE Healthcare Life Science), scanned with the densitometer (FluorChem IS8900; Alpha Innotech, Santa Clara, CA), and quantified using NIH‐ImageJ software. Data were normalized with the corresponding internal reference β‐actin. Relative value was normalized to wild‐type control, LF‐SED.
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5

EV71-Induced Inflammasome Activation in THP-1 Macrophages

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THP-1 macrophages were infected with EV71 in RPMI 1640 medium without FBS. Cell lysates and chloroform-methanol concentrated supernatants were separated by SDS-PAGE, transferred to nitrocellulose membranes and hybridized with various primary antibodies. Rabbit anti-EV71 VP1 polyclonal antibody was generated previously37 (link). Rabbit anti- ASC (sc-22514, Santa Cruz), rabbit anti-human caspase-1 (sc-515, Santa Cruz), rabbit anti- mature and pro-IL-1β (sc-7884, Santa Cruz), mouse anti-β-actin (Sigma), as well as appropriate HRP-conjugated secondary antibodies (Santa Cruz) were applied for signal detection via ECL reagent (Perkin Elmer). ASC oligomerization detection was performed as described before25 (link).
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6

Investigating RIPK1/3 and Inflammasome Activation

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Anti-RIPK1, anti-RIPK3, and anti-MLKL antibodies used in the present study were kindly provided by Prof. Jianhuai Han. Anti–mouse IL-1β antibody (5129–100; BioVision), anti-mouse caspase-1 p20 (AG-20B-0042-C100; AdipoGen), anti-ASC antibody (sc-22514; Santa Cruz Biotechnology), anti-NLRP3 antibody (ab214185; abcam); anti-GAPDH (3781; ProSci), anti-α-SMA (A5228; Sigma-Aldrich), anti-p-Smad3 (ab52903; Abcam), anti-collagen I (ab34710; abcam), and anti-tubulin (T9026; Sigma-Aldrich), anti-MCP-1(ab25124; abcam), anti-ICAM (ab25375; abcam) were used for western blotting. Anti-F4/80 antibody [CI: A3-1] (ab6640, abcam) was used for immunohistochemistry. Mouse TNFα ELISA Kit ab100747 was used for detecting kidney TNFα secretion.
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7

Immunofluorescence Staining of Inflammasome Proteins

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After treatments, cells plated on coverslips (9–15 mm) were fixed in 4% paraformaldehyde for 15 min at room temperature. Cells were permeabilized for 10 min using 0.25% Triton X-100 in PBS. After blocking with 10% normal goat serum for 1 h, cells were incubated with anti-ASC antibody (1:100 dilution; sc-22514; Santa Cruz Biotechnology), anti-NLRP3 antibody (1:100 dilution; G-20B-0014-C100; AdipoGen; previously approved for immunostaining; Man et al., 2014 (link)), anti–phospho-NLRP3 (Ser295) antibody (generated as described in the methodology section Immunoprecipitaion and immunoblotting above; 1:50), anti-giantin antibody (1:300 dilution; ALX-804-600-C100; Enzo Life Science), anti-giantin antibody (1:300 dilution; AB24586; Abcam), anti-GM130 antibody (1:300 dilution; 11308-AP; Proteintech), and anti-Tom20 antibody (1:500 dilution; sc-11415; Santa Cruz Biotechnology) for 1 h at room temperature. After incubation with secondary antibodies for 1 h at room temperature, cells were stained with DAPI and mounted. Images were acquired using Confocal Laser Scanning Microscope TCS SP8 (Leica).
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8

Quantifying NLRP3 Inflammasome Proteins

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Brain tissues were lysed using RIPA supplemented with protease inhibitor (P2850, Sigma-Aldrich). A BCA Kit (P0012, Beyotime) was employed for protein quantification. Equal amounts of protein were loaded on SDS‐PAGE gels. After electrophoresis, they were transferred to polyvinylidene difluoride membranes. The membranes were blocked with 1% bovine serum albumin (BSA, ST2254, Beyotime) and then incubated with primary antibodies overnight at 4°C. The primary antibodies used for western blotting were shown as follows: anti-NLRP3 (ab263899, Abcam), anti-ASC (sc-22514, Santa Cruz), anti-caspase-1 (SC-56036, Santa Cruz), anti-c-caspase-1 (SC-398715, Santa Cruz), and anti-SIRT1(ab110304, Abcam). After being washed, they were incubated with corresponding secondary antibodies for 1 h. Protein signals were quantified using the Image J.
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