RNA was isolated from four samples per group in day 0, 7, 14 and 21 using the
RNeasy Mini Kit (Qiagen, Hilden, Germany) followed the manufacturer's instructor. RNA content (ng per sample) and ratio of absorbance at 260 nm to 280 nm, indicating RNA purity, was measured using Tecan Infinite®
M200 Pro reader. Presence of the RNA in the samples was checked using standard agarose gel electrophoresis. The isolated RNA was processed followed manufacturers instruction. Briefly, osteogenic markers osteocalcin (OCN), collagen type I (COL1A2), integrin binding sialoprotein (ISBP), and EE1 (eukaryotic elongation factor, was used as housekeeping gene) genes were analysed. Detail description of the analysed genes in ESI Table S1.
† For the reactions
RevertAid H Minus First Strand cDNA Synthesis Kit (Thermo Scientific, Waltham, MA), TaqMan probes with a fluorescent label at the 5′ end and the quencher on the 3′ end (reviewed in ESI
†),
TaqMan Gene Expression Master Mix (Thermo Scientific, Waltham, MA, USA) and
RT-PCR Grade Water (Thermo Scientific, Waltham, MA) was used. Results were generated from the values obtained by calculation according to the formula 2
−ΔCp.
Light Cycler 480 (Roche, Basel, Switzerland) was used to measure the fluorescence intensity.
Jarolimova P., Voltrova B., Blahnova V., Sovkova V., Pruchova E., Hybasek V., Fojt J, & Filova E. (2020). Mesenchymal stem cell interaction with Ti6Al4V alloy pre-exposed to simulated body fluid. RSC Advances, 10(12), 6858-6872.